SGID Silkworm Genome Informatics Database
Gene
KWMTBOMO14630
Annotation
PREDICTED:_uncharacterized_protein_LOC106719734_[Papilio_machaon]
Location in the cell
Nuclear   Reliability : 2.674
 

Sequence

CDS
ATGGATGTGCGGTCGAGCAGGAGTACTTTGAGTGAGCAGGAGTTGATTGGTGATGAGGTAGAACAATTTCAAGAAGAGAATTCTATGCAAGAGATGAATGCGATGGAGGATTGGTTAAGACCAGAGAAGAGAAAAGATGTCAACAGTGACGATGAATGGACAACGATTAAATCGAAGCAGAAGAAGCTTAAACCGGAAGTTGAGAAAATAGAGATGTACTTAACTGGTAGTGAACCGCTGCCGAAACAATTTTCTTTAGCGAAAATATTTTGTGAGATGGATATTACCGATGTGGACCGCGTAAAATATGTTAACCCATACAAAGTGCGTATCGATGTACAGAACCCACTGAGCGCAGAGAGGATTGAAAAAAGTTCTAAGATAGCAGATAAAGGCTGGCGTGTACAAAGAGCTATGGAGAAGAATTTATCATATGGTGTTATTCGCGACATAGACTTGGAAATATCCGACAAAGAGATTTTTGACACAATATCGTGCCCCAAACCAGCAGAACTGGTATCTATATTCCGTCTCAACCGGCGCAGTAGCTCGGGCGACGGATGGGTACCTATACAGGTGCCCAAAAAGTTTAGTTTCACCGCTACCCCTGCTCCTCCGCTAATGGAGTACATCTCATCCGTGCCACCAAAAACCTTGCAAAGTAACGCACCGACTTTTGCTAGCGTCTTACAGACAAAAGCGGAGATTCACATCGAAGAAAACGCTAAACAAACACCAAGATCGGTTTCGAAAAAACAACGTCGTCGTCGTAGGGAGCCTGATGTATCTGTATTGGACTCGGCTGCTGAAGCTGAAATAGAAGAGATGCCCGGGAAAAATGCGCCTCTGGAACAGAAGGAAAGAAGAAATGTGAATTTTGTAGAGTTATTGAATAAATTGAAAGATCTTTTTTTTTAA
Protein
MDVRSSRSTLSEQELIGDEVEQFQEENSMQEMNAMEDWLRPEKRKDVNSDDEWTTIKSKQKKLKPEVEKIEMYLTGSEPLPKQFSLAKIFCEMDITDVDRVKYVNPYKVRIDVQNPLSAERIEKSSKIADKGWRVQRAMEKNLSYGVIRDIDLEISDKEIFDTISCPKPAELVSIFRLNRRSSSGDGWVPIQVPKKFSFTATPAPPLMEYISSVPPKTLQSNAPTFASVLQTKAEIHIEENAKQTPRSVSKKQRRRRREPDVSVLDSAAEAEIEEMPGKNAPLEQKERRNVNFVELLNKLKDLFF

Summary

Pfam
PF00075   RNase_H        + More
PF00078   RVT_1
Interpro
IPR036397   RNaseH_sf        + More
IPR000477   RT_dom       
IPR012337   RNaseH-like_sf       
IPR002156   RNaseH_domain       
SUPFAM
SSF53098   SSF53098       
Gene 3D

Ontologies

Topology

Length:
305
Number of predicted TMHs:
0
Exp number of AAs in TMHs:
0
Exp number, first 60 AAs:
0
Total prob of N-in:
0.04773
outside
1  -  305
 
 

Population Genetic Test Statistics

Pi
392.815745
Theta
196.099965
Tajima's D
2.994743
CLR
0
CSRT
0.979601019949003
Interpretation
Uncertain

Multiple alignment of Orthologues

 
 

Gene Tree

 
 
Copyright@ 2018-2023    Any Comments and suggestions mail to:zhuzl@cqu.edu.cn   渝ICP备19006517号

渝公网安备 50010602502065号