Gene

KWMTBOMO14628  Validated by peptides from experiments

Pre Gene Modal

BGIBMGA009559

Annotation

PREDICTED:_vesicle_transport_protein_GOT1B_[Papilio_xuthus]

Location

Bomo_Chr24(+):11523159-11531043      View in EpiBrowser

Location in the cell

PlasmaMembrane   Reliability : 4.379

CDS

ATGCTTGAGATAACGGATACACAGAAGATTGGCGTAGGCCTAGCTGGTTTCGGAATGACATTTCTATTCCTCGGAGTACTTCTGTTGTTCGATAAAGGTCTCCTAGCCATTGGCAATATCCTGTTCATAAGTGGTCTGACATGTGTGATCGGCATCCAGAGGACGTTTTTCTTCTTCTTCCAACGGCACAAGCTGAAGGCGTCCGTCGCCTTCTTCAGTGGGATCACTATAGTACTGCTCGGCTGGCCCATGATCGGGATGATAGCCGAGATGTACGGCTTCTTGCTGTTGTTCAGAGGATTCCTGCCTTCTGCCATTAATTTCTTAAGGATGGTACCAGTTTTGGGGTCGCTACTGAATCTTCCGATAATAAGAGGGATCGTCGATAGGATAGCGGGAAACAATGGTCGGAACATGGATGACGATCCTTAA

Protein

MLEITDTQKIGVGLAGFGMTFLFLGVLLLFDKGLLAIGNILFISGLTCVIGIQRTFFFFFQRHKLKASVAFFSGITIVLLGWPMIGMIAEMYGFLLLFRGFLPSAINFLRMVPVLGSLLNLPIIRGIVDRIAGNNGRNMDDDP

Uniprot

H9JJ58   A0A2H1VY29   A0A2A4J2B9   A0A2A4J2D5   A0A3S2LUV1   A0A0N1IPS3   + More
S4NS88   A0A1S4FRL2   A0A067R0R0   A0A1L8DV02   J9JQD8   A0A1B0CQC7   A0A1B6DV41   A0A1B0D3M9   U5EWB4   A0A2M4C2Z3   A0A139WLM3   A0A023EGA5   T1DFG4   A0A1J1J0L1   B0WFA6   W5JFW1   Q1HQF4   A0A2M3ZL72   A0A1S3DJP2   A0A1Q3G2W1   A0A2M4AMU1   A0A182RCW7   A0A182VQ98   A0A2H8TIU2   A0A182F8N5   A0A2M4C3P9   A0A2R7VXI2   A0A0N7Z9D7   T1HZY7   A0A182N4N4   A0A182QSZ0   A0A0T6BED0   A0A182J8C8   A0A182XIC7   A0A2M3ZD53   A0A2M4AMT0   A0A182PA30   A0A182UME7   A0A182K3Y6   A0A182TSN7   A0A182LFG2   Q7QBY0   A0A182HTB2   A0A0A9X4Z7   J3JWM3   A0A2S2QLG6   E1ZZW9   T1EB25   E9JCP8   A0A154PB23   A0A026VZY8   A0A151J1K1   A0A195CXR9   F4WTW1   A0A195AUL2   A0A151JY00   A0A158P0X6   A0A151WWE2   A0A0K8VIT3   E2BR22   E0W1Z9   B4NEW6   A0A232EPB0   K7IW88   A0A087UNX4   A0A0K8W9W2   A0A0A1WLR8   A0A132A7S3   B3NX67   A0A0J7L8M6   B4IF45   A0A1Y3AW28   A0A1Q3G2P0   B4JJY3   B4MG93   B4PXQ9   A0A131YN96   A0A1I8NT14   A0A023EGG2   B4HB63   A0A1S3DJG2   B4L7Q1   A0A182H1M8   A0A2B4SSW3   A0A087ZUH2   A0A1I8NT02   A0A1I8MLJ3   A0A023GDT5   A7S7J0   A0A1L8ECN0   A0A2A3EJV2   A0A3B0JWZ4   A0A1E1WXE5   A0A023FWG0  

Pubmed

19121390    26354079    23622113    24845553    18362917    19820115    + More
24945155    24330624    20920257    23761445    17204158    17510324    27129103    20966253    12364791    14747013    17210077    25401762    26823975    22516182    23537049    20798317    21282665    24508170    30249741    21719571    21347285    20566863    17994087    28648823    20075255    25830018    26555130    17550304    26830274    18057021    26483478    25315136    17615350    28503490   

EMBL

BABH01040466    ODYU01005155    SOQ45739.1    NWSH01004041    PCG65542.1    PCG65543.1    + More
RSAL01000199    RVE44504.1    KQ460301    KPJ16131.1    GAIX01014207    JAA78353.1    KK853024    KDR12335.1    GFDF01003835    JAV10249.1    ABLF02024979    AJWK01023411    GEDC01007742    JAS29556.1    AJVK01003062    GANO01001495    JAB58376.1    GGFJ01010390    MBW59531.1    KQ971321    KYB28793.1    GAPW01005743    GEHC01000353    JAC07855.1    JAV47292.1    GALA01000617    JAA94235.1    CVRI01000066    CRL05872.1    DS231916    EDS26123.1    ADMH02001618    ETN61770.1    DQ440490    CH477701    ABF18523.1    EAT37078.1    EAT37079.1    GGFM01008491    MBW29242.1    GFDL01000949    JAV34096.1    GGFK01008795    MBW42116.1    GFXV01001393    MBW13198.1    GGFJ01010487    MBW59628.1    KK854150    PTY12207.1    GDKW01000835    JAI55760.1    ACPB03008739    AXCN02000052    LJIG01001288    KRT85652.1    GGFM01005736    MBW26487.1    GGFK01008785    MBW42106.1    AAAB01008859    EAA08222.3    APCN01000435    GBHO01031469    GDHC01004193    JAG12135.1    JAQ14436.1    BT127641    KB632070    AEE62603.1    ERL88532.1    GGMS01009406    MBY78609.1    GL435530    EFN73280.1    GAMD01000438    JAB01153.1    GL771854    EFZ09401.1    KQ434846    KZC08428.1    KK107622    QOIP01000009    EZA48444.1    RLU18241.1    KQ980514    KYN15755.1    KQ977141    KYN05455.1    GL888345    EGI62318.1    KQ976738    KYM75747.1    KQ981515    KYN40779.1    ADTU01005894    KQ982691    KYQ52136.1    GDHF01013513    JAI38801.1    GL449898    EFN81828.1    DS235873    EEB19593.1    CH964239    EDW82285.1    NNAY01002956    OXU20219.1    KK120802    KFM79063.1    GDHF01012695    GDHF01004368    JAI39619.1    JAI47946.1    GBXI01014293    JAC99998.1    JXLN01011210    KPM06977.1    CH954180    EDV46896.1    LBMM01000237    KMR03372.1    CH480832    EDW46099.1    MUJZ01055020    OTF72701.1    GFDL01000958    JAV34087.1    CH916370    EDV99885.1    CH940672    EDW57416.1    CM000162    EDX01895.1    GEDV01008130    JAP80427.1    GAPW01005854    JAC07744.1    CH479248    EDW37875.1    CH933814    EDW05764.1    KRG07517.1    JXUM01103695    KQ564826    KXJ71696.1    LSMT01000028    PFX31990.1    GBBM01003416    JAC32002.1    DS469593    EDO40339.1    GFDG01002450    JAV16349.1    KZ288223    PBC31970.1    OUUW01000011    SPP86607.1    GFAC01007478    JAT91710.1    GBBL01002252    JAC25068.1   

Proteomes

UP000005204    UP000218220    UP000283053    UP000053240    UP000027135    UP000007819    + More
UP000092461    UP000092462    UP000007266    UP000183832    UP000002320    UP000000673    UP000008820    UP000079169    UP000075900    UP000075920    UP000069272    UP000015103    UP000075884    UP000075886    UP000075880    UP000076407    UP000075885    UP000075903    UP000075881    UP000075902    UP000075882    UP000007062    UP000075840    UP000030742    UP000000311    UP000076502    UP000053097    UP000279307    UP000078492    UP000078542    UP000007755    UP000078540    UP000078541    UP000005205    UP000075809    UP000008237    UP000009046    UP000007798    UP000215335    UP000002358    UP000054359    UP000008711    UP000036403    UP000001292    UP000001070    UP000008792    UP000002282    UP000095300    UP000008744    UP000009192    UP000069940    UP000249989    UP000225706    UP000005203    UP000095301    UP000001593    UP000242457    UP000268350   

PRIDE

H9JJ58   

Pfam

PF04178   Got1

Interpro

IPR007305   Vesicle_transpt_Got1/SFT2       

ProteinModelPortal

H9JJ58   A0A2H1VY29   A0A2A4J2B9   A0A2A4J2D5   A0A3S2LUV1   A0A0N1IPS3   + More
S4NS88   A0A1S4FRL2   A0A067R0R0   A0A1L8DV02   J9JQD8   A0A1B0CQC7   A0A1B6DV41   A0A1B0D3M9   U5EWB4   A0A2M4C2Z3   A0A139WLM3   A0A023EGA5   T1DFG4   A0A1J1J0L1   B0WFA6   W5JFW1   Q1HQF4   A0A2M3ZL72   A0A1S3DJP2   A0A1Q3G2W1   A0A2M4AMU1   A0A182RCW7   A0A182VQ98   A0A2H8TIU2   A0A182F8N5   A0A2M4C3P9   A0A2R7VXI2   A0A0N7Z9D7   T1HZY7   A0A182N4N4   A0A182QSZ0   A0A0T6BED0   A0A182J8C8   A0A182XIC7   A0A2M3ZD53   A0A2M4AMT0   A0A182PA30   A0A182UME7   A0A182K3Y6   A0A182TSN7   A0A182LFG2   Q7QBY0   A0A182HTB2   A0A0A9X4Z7   J3JWM3   A0A2S2QLG6   E1ZZW9   T1EB25   E9JCP8   A0A154PB23   A0A026VZY8   A0A151J1K1   A0A195CXR9   F4WTW1   A0A195AUL2   A0A151JY00   A0A158P0X6   A0A151WWE2   A0A0K8VIT3   E2BR22   E0W1Z9   B4NEW6   A0A232EPB0   K7IW88   A0A087UNX4   A0A0K8W9W2   A0A0A1WLR8   A0A132A7S3   B3NX67   A0A0J7L8M6   B4IF45   A0A1Y3AW28   A0A1Q3G2P0   B4JJY3   B4MG93   B4PXQ9   A0A131YN96   A0A1I8NT14   A0A023EGG2   B4HB63   A0A1S3DJG2   B4L7Q1   A0A182H1M8   A0A2B4SSW3   A0A087ZUH2   A0A1I8NT02   A0A1I8MLJ3   A0A023GDT5   A7S7J0   A0A1L8ECN0   A0A2A3EJV2   A0A3B0JWZ4   A0A1E1WXE5   A0A023FWG0  

KEGG

101740502    no KO assigned | (RefSeq) vesicle transport protein GOT1B

GO

GO:0016021   GO:0016192   GO:0005783   GO:0005524   GO:0006955   GO:0016740   GO:0003677   GO:0006101   GO:0003824   GO:0008152   GO:0016491   GO:0015930  

Length:

143

Number of predicted TMHs:

4

Exp number of AAs in TMHs:

84.65011

Exp number, first 60 AAs:

41.43504

Total prob of N-in:

0.94286

POSSIBLE N-term signal

sequence

inside

1  -  11

TMhelix

12  -  30

outside

31  -  34

TMhelix

35  -  57

inside

58  -  68

TMhelix

69  -  91

outside

92  -  105

TMhelix

106  -  128

inside

129  -  143

 

 

Pi

289.546928

Theta

174.339229

Tajima's D

2.244655

CLR

0.143003

CSRT

0.91850407479626

Interpretation

Uncertain