Gene

KWMTBOMO14627  Validated by peptides from experiments

Pre Gene Modal

BGIBMGA009554

Annotation

PREDICTED:_interleukin_enhancer_binding_factor_isoform_X2_[Bombyx_mori]

Location

Bomo_Chr24(-):11506121-11520208      View in EpiBrowser

Full name

Interleukin enhancer-binding factor 2 homolog      

Location in the cell

Mitochondrial   Reliability : 2.152

CDS

ATGGTGCGCGGCATCGGTCGTGGTGGACGCGGTATCCCCGGCCGGGGCGGGATGGGGCGTCCACCCTTCAACAGACCCCGAGTCTTGATGCTTCGTCCGCCCTTCGACCTTTTATTAGCAGAACCCGCTTTTCCTAGATGCAAACCGGCTCCCGACGACTCCGTGCTCACTCAGGCCCTTCTAAAGAGGCACACGGAGCTATGTCCGTCACCTACCGATCAAGCAGCTGTTTTGAGCCTCGTCACGAAACTGCAGACAGTATTGGACAATATTGTTGTGGCTCCAGGAGAATTTGCAGCCTGCCAACTAGAAGAAGTGCGGCAAGTTGGGTCCTACAAGAAGGGGACAATGATGGCCGGGAAGAACGTTGCTGATATCGTAGTCATCATGAAAACTTTGCCAACGAAAGAGGCTGTCGAGGGACTCTCCAATAAGGTTAACGAGGAGGTGAACAAGCTGATGAAGGCTGAAGGCAGCGGTGCAGTGGTGAGCGCGTGTCACGAGCGCGGCTTCACTGTCACCGGGACCTCCGCAGCCGTCAGGGTCCTCATCACAACACTGCATCAGAACTTAAGGAAGATAGAGCCTGATGTACATTTAGACTATAAAGTGATAAGCAGTCATCTAGCAGCGATAAGACACAGTCGCTGGTTTGAAGAGAACGCCCATCATTCATCAATTAAAGTATTGATCCGTCTTCTCCGGGACATGTGTTCTCGGCACTCCGGACTCGAACCCCTGACGCCGTGGATGATAGATCTGCTCGCGCACCACTGCATCATGAACAACCCTCAGCGTCAGGCCTTACCCATCAACGTGGCATTCCGCCGCGCGTTGTCTCTGATGGCGGGCGGGTTGTTCCTGCCGGGCTGCGCGGGGCTGCCGGACCCGTGCGAGGCGGCGCACTCCCGCGCACACACCGCGCTCGACCTCGCCGCGCAAGACCTCGCCGCCGCCACCGCACAGACGTTGCTTCGCGTGGTGGCGCGCGGGGGTCACCTGTACGTCCTGGGTCTCCAGCCCTTCGAGGGCGGCAAGGACATATCCTTGGAGATCACGGTGTGGGACGGCGTGGTGGTCTCCCCGCTAGCGCCCGCCTACAACGACTCGCCGGAGCCCATGGACACCGACGACAAAGAAGAAGAGTCACAAGACAGTGTCGCGGCTTAA

Protein

MVRGIGRGGRGIPGRGGMGRPPFNRPRVLMLRPPFDLLLAEPAFPRCKPAPDDSVLTQALLKRHTELCPSPTDQAAVLSLVTKLQTVLDNIVVAPGEFAACQLEEVRQVGSYKKGTMMAGKNVADIVVIMKTLPTKEAVEGLSNKVNEEVNKLMKAEGSGAVVSACHERGFTVTGTSAAVRVLITTLHQNLRKIEPDVHLDYKVISSHLAAIRHSRWFEENAHHSSIKVLIRLLRDMCSRHSGLEPLTPWMIDLLAHHCIMNNPQRQALPINVAFRRALSLMAGGLFLPGCAGLPDPCEAAHSRAHTALDLAAQDLAAATAQTLLRVVARGGHLYVLGLQPFEGGKDISLEITVWDGVVVSPLAPAYNDSPEPMDTDDKEEESQDSVAA

Description

May regulate transcription of undefined genes.

Keywords

Activator   Complete proteome   DNA-binding   Nucleus   Reference proteome   Transcription   Transcription regulation  

Feature

chain  Interleukin enhancer-binding factor 2 homolog

Uniprot

H9JJ53   A0A1U9WZ16   Q1HQ53   A0A2A4K8R2   S4PGW7   A0A194QA28   + More
A0A1W4XQ41   A0A1W4XEF7   D6WBL5   A0A1Y1LS60   J3JUT3   A0A2P8XSH0   A0A2P2HXD6   A0A2J7Q4Q3   A0A0P4WCS1   F8QPP3   A0A0P4VT16   A0A3Q1NE57   A0A3Q1LQ32   A0A182SQU5   A0A232FA74   K7IP42   A0A0P4VXW9   A0A2U8U4E8   A0A221I026   A0A182MM15   A0A182RPU0   E2A4P7   A0A1L8DIA0   A0A182XVV3   Q7PYL7   A0A154P1V5   A0A182TNL3   A0A084VHH5   E2B9F5   A0A1A9YL04   A0A1B0BBM9   A0A182JQN8   A0A1B0A0E7   A0A182KLT0   A0A182PKJ3   A0A1A9UYI0   D3TNH2   T1IUY8   E9IFQ9   A0A1B0CW66   A0A0M8ZZG1   A0A1B6CIS9   A0A026W9B2   A0A182NCD9   A0A310STI6   A0A182JLB6   A0A182VZ00   A0A034W4I8   A0A182I069   A0A182XBC7   A0A0K8V216   W5JHA1   A0A0M4EP46   B4K879   A0A182VJA3   A0A2A3EDI8   A0A088ADH2   A0A023ERG4   A0A182F6U4   A0A0L7RJ50   B4LYA2   A0A0A1XPM1   Q177Q9   A0A195EZ63   A0A1A9W2C2   F4W9V9   A0A158NZ98   A0A151WKJ2   A0A151IK98   B4JTP2   W8B493   A0A195BQB1   A0A195EEW1   A0A182QEB9   A0A336MBK7   B4NJF4   A0A0L0CHB4   A0A1Q3FWD6   A0A3B0KAB1   B4GZ64   T1P8N3   E0VPK9   A0A023F8Y5   A0A1I8Q431   B3P4C0   Q9VG73   A0A0V0GC42   A0A0P4VS90   R4G8F6   Q29B25   A0A0A9VVU2   B4QSB1  

Pubmed

19121390    23622113    26354079    18362917    19820115    28004739    + More
22516182    23537049    29403074    21439385    19393038    28648823    20075255    20798317    25244985    12364791    14747013    17210077    24438588    20966253    20353571    21282665    24508170    30249741    25348373    20920257    23761445    17994087    24945155    26483478    25830018    17510324    21719571    21347285    24495485    26108605    25315136    20566863    25474469    10731132    12537572    12537569    27129103    15632085    25401762   

EMBL

BABH01040464    KY082711    AQY61716.1    DQ443199    ABF51288.1    NWSH01000060    + More
PCG80060.1    GAIX01006030    JAA86530.1    KQ459249    KPJ02279.1    KQ971311    EEZ99001.1    GEZM01049840    JAV75811.1    APGK01020037    APGK01020038    APGK01020039    APGK01020040    BT126998    KB740153    KB632402    AEE61960.1    ENN81217.1    ERL94948.1    PYGN01001436    PSN34854.1    IACF01000650    LAB66412.1    NEVH01018378    PNF23560.1    GDRN01099405    GDRN01099404    JAI58765.1    GU002546    ADF87944.1    GDRN01099406    JAI58763.1    NNAY01000623    OXU27333.1    GDRN01099407    JAI58762.1    MG182160    AWM96384.1    KY765910    ASM46960.1    AXCM01008446    GL436716    EFN71581.1    GFDF01007921    JAV06163.1    AAAB01008987    EAA01244.4    KQ434803    KZC05915.1    ATLV01013171    KE524842    KFB37419.1    GL446502    EFN87679.1    JXJN01011541    CCAG010012761    EZ422974    ADD19250.1    JH431567    GL762889    EFZ20605.1    AJWK01031832    KQ435812    KOX72763.1    GEDC01024045    GEDC01010196    JAS13253.1    JAS27102.1    KK107321    QOIP01000002    EZA52687.1    RLU25865.1    KQ760549    OAD59867.1    GAKP01008436    JAC50516.1    GDHF01019501    JAI32813.1    ADMH02001255    ETN63431.1    CP012526    ALC46564.1    CH933806    EDW15433.1    KZ288271    PBC29843.1    JXUM01120765    GAPW01001818    KQ566429    JAC11780.1    KXJ70143.1    KQ414581    KOC70992.1    CH940650    EDW67990.1    GBXI01001769    JAD12523.1    CH477372    EAT42404.1    EAT42405.1    KQ981909    KYN33197.1    GL888033    EGI69095.1    ADTU01000876    KQ983012    KYQ48364.1    KQ977234    KYN04694.1    CH916374    EDV91471.1    GAMC01018474    GAMC01018471    GAMC01018468    JAB88081.1    KQ976423    KYM88761.1    KQ979039    KYN23342.1    AXCN02000020    UFQT01000715    SSX26711.1    CH964272    EDW84985.1    JRES01000378    KNC31803.1    GFDL01003312    JAV31733.1    OUUW01000005    SPP80498.1    CH479198    EDW28082.1    KA645131    AFP59760.1    DS235366    EEB15315.1    GBBI01000810    JAC17902.1    CH954181    EDV49365.1    AE014297    AY051610    GECL01000672    JAP05452.1    GDKW01001799    JAI54796.1    ACPB03005851    GAHY01001057    JAA76453.1    CM000070    EAL27174.2    GBHO01045271    JAF98332.1    CM000364    EDX13207.1   

Proteomes

UP000005204    UP000218220    UP000053268    UP000192223    UP000007266    UP000019118    + More
UP000030742    UP000245037    UP000235965    UP000009136    UP000075901    UP000215335    UP000002358    UP000075883    UP000075900    UP000000311    UP000076408    UP000007062    UP000076502    UP000075902    UP000030765    UP000008237    UP000092443    UP000092460    UP000075881    UP000092445    UP000075882    UP000075885    UP000078200    UP000092444    UP000092461    UP000053105    UP000053097    UP000279307    UP000075884    UP000075880    UP000075920    UP000076407    UP000000673    UP000092553    UP000009192    UP000242457    UP000005203    UP000069940    UP000249989    UP000069272    UP000053825    UP000008792    UP000008820    UP000078541    UP000091820    UP000007755    UP000005205    UP000075809    UP000078542    UP000001070    UP000078540    UP000078492    UP000075886    UP000007798    UP000037069    UP000268350    UP000008744    UP000095301    UP000009046    UP000095300    UP000008711    UP000000803    UP000015103    UP000001819    UP000000304   

PRIDE

H9JJ53    Q1HQ53    Q9VG73   

Pfam

PF07528   DZF        + More
PF00338   Ribosomal_S10

Interpro

IPR006116   2-5-oligoadenylate_synth_N        + More
IPR006561   DZF_dom       
IPR027486   Ribosomal_S10_dom       
IPR036838   Ribosomal_S10_dom_sf       

SUPFAM

SSF54999   SSF54999       

Gene 3D

3.30.70.600    

ProteinModelPortal

H9JJ53   A0A1U9WZ16   Q1HQ53   A0A2A4K8R2   S4PGW7   A0A194QA28   + More
A0A1W4XQ41   A0A1W4XEF7   D6WBL5   A0A1Y1LS60   J3JUT3   A0A2P8XSH0   A0A2P2HXD6   A0A2J7Q4Q3   A0A0P4WCS1   F8QPP3   A0A0P4VT16   A0A3Q1NE57   A0A3Q1LQ32   A0A182SQU5   A0A232FA74   K7IP42   A0A0P4VXW9   A0A2U8U4E8   A0A221I026   A0A182MM15   A0A182RPU0   E2A4P7   A0A1L8DIA0   A0A182XVV3   Q7PYL7   A0A154P1V5   A0A182TNL3   A0A084VHH5   E2B9F5   A0A1A9YL04   A0A1B0BBM9   A0A182JQN8   A0A1B0A0E7   A0A182KLT0   A0A182PKJ3   A0A1A9UYI0   D3TNH2   T1IUY8   E9IFQ9   A0A1B0CW66   A0A0M8ZZG1   A0A1B6CIS9   A0A026W9B2   A0A182NCD9   A0A310STI6   A0A182JLB6   A0A182VZ00   A0A034W4I8   A0A182I069   A0A182XBC7   A0A0K8V216   W5JHA1   A0A0M4EP46   B4K879   A0A182VJA3   A0A2A3EDI8   A0A088ADH2   A0A023ERG4   A0A182F6U4   A0A0L7RJ50   B4LYA2   A0A0A1XPM1   Q177Q9   A0A195EZ63   A0A1A9W2C2   F4W9V9   A0A158NZ98   A0A151WKJ2   A0A151IK98   B4JTP2   W8B493   A0A195BQB1   A0A195EEW1   A0A182QEB9   A0A336MBK7   B4NJF4   A0A0L0CHB4   A0A1Q3FWD6   A0A3B0KAB1   B4GZ64   T1P8N3   E0VPK9   A0A023F8Y5   A0A1I8Q431   B3P4C0   Q9VG73   A0A0V0GC42   A0A0P4VS90   R4G8F6   Q29B25   A0A0A9VVU2   B4QSB1  

PDB

4ATB     E-value=9.46674e-94,     Score=876

KEGG

732918    K13089 interleukin enhancer-binding factor 2 | (RefSeq) interleukin enhancer binding factor

GO

GO:0006955   GO:0005524   GO:0016740   GO:0003723   GO:0005634   GO:0006351   GO:0071013   GO:0003677   GO:0005730   GO:0071011   GO:0000398   GO:0003725   GO:0045893   GO:0006101   GO:0003824   GO:0008152   GO:0016491   GO:0015930  

Subcellular location

Nucleus  

Length:

389

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

0.03048

Exp number, first 60 AAs:

0.00018

Total prob of N-in:

0.01164

outside

1  -  389

 

 

Pi

256.526352

Theta

181.927224

Tajima's D

0.641486

CLR

0.285279

CSRT

0.554022298885056

Interpretation

Uncertain