SGID Silkworm Genome Informatics Database
Gene
KWMTBOMO14621
Pre Gene Modal
BGIBMGA009555
Annotation
PREDICTED:_tankyrase-2_[Amyelois_transitella]
Full name
Poly [ADP-ribose] polymerase       + More
Poly [ADP-ribose] polymerase tankyrase-1      
Alternative Name
ADP-ribosyltransferase diphtheria toxin-like 5
Protein poly-ADP-ribosyltransferase tankyrase-1
TRF1-interacting ankyrin-related ADP-ribose polymerase 1
Tankyrase-1
Location in the cell
Mitochondrial   Reliability : 1.925 Nuclear   Reliability : 1.283
 

Sequence

CDS
ATGGCGGAGAATTTTAGGTCTGCCGCAGATGCTTGCACTAACGCGGCGGCAGTCCGGCTGCTAGAAGCTGCTCGCACTGGTGACGTGGAGACAGCCCGAGCGATCCTCGACTCGCGACCGAGACTCGTCAACTGCAGAGATGTCGACGGGCGGCATTCGACGCCCCTGCATTTCGCTGCCGGGTACAATCGACTTCCATTGGCTCAGTTACTACTTCAGCGTGGAGCTGATGTACACGCGAAAGATAAGGGAGGTCTGGTCCCGCTTCACAACGCGTGCTCCTACGGCCATTACGAGGTCACCGAGCTCCTCGTGTCTGCCGGAGCCGGTGTGAACGCCGCGGACCTCTGGAGGTTCTCACCCTTGCACGAGGCAGCGGCTAAAGGCAAGGCGGATATCGTGAGATTGCTGCTCAAGCATGGGGCGGATCCCACCCGGAGGAACAGGGACGGACTCACGCCGCTGCAACTGGTGCGAGCGGGAGACAGCGACACGGCTGACGCGCTGCGGGGTGATGCTGCGCTACTGGACGCTGCCAAGAGAGGGGACCTCGCTCGAGCCAGGAAACTGATAACTCCTCAAAACGTGAACTGCCGGGACGCGCACGGACGTAACTCCACGCCCTTGCATTTGGCTGCCGGGTATAACAACCTGGAGGTGGCCGAGGCTCTGCTGGAGGCGGGCGCGCTGGTGTCGGCGCGCGACAAGGGCGGGCTGGTGCCGCTGCACAATGCGGCCTCATACGGGCACCTCGAGCTGGCGGCGCTGCTGCTGCGCGCGGGCACGCCGCCCAACGCCGCCGACCGCTGGGGCTTCACGCCCCTGCACGAGGCCGCGCACAAGGCCAGGACCCAGCTCTGCGCGCTGCTGCTGGCCCACGGAGCGGACCCGTTCCTCAAGAACCAGGAGGGGCAGACGGCTCTTGAACTGTCCGGGGCCGAGGACGTGAGGTCGCTGCTGCAGGACGCGATGACGTCATCGGCCGGTGACGTGACGTCATCGTCCGCGCCCGTCCCTCCGCCGGCTCCGCTGCCGCCCCCCTCGCACCCCGTGCTCATGCCGAGCGGGGACACGGTGCAGTTGGCGTTGCCGGTCCTGCCCAGCAACTACTGGGCGGAGGGGTCCAGGGGCAGCTTGGAAGACGCAGCCGGGAGGCCGGCGTCGGCCCTCTCCACCTCGGAGTCCCTGCAGACATTCCTGGCGAGCGTCGGACTGGAGCAGCTGGGGCCGCTGCTGGAGCGAGAGCAGATAACGGTGGACATCCTGTGCGAGATGTCGCACGAGGATCTGCGCGCGGTCGGCGTTGCGGCCTACGGACATCGGCATCGGTTGCTAAAGGCGGCCCGGCGCACCGCCCACGCCGCCAACGAATGGTACGGCGGCACGACCCTCGTAGAGGTGACCCCGAGCGGCGAGGGGGGCGAGTACGCGGTGCTCGAGAGGGAGATGCAGGCCTCCGTGCGCGCGCACCGGGAGCACGCCGGGGGCCACTTCACGCACTACAACGTCGTCAAGATCCAGAAGATCGTGAACGGTCGGGTCTGGGAGCGGTACCAGCACCGGCGGCGCGAGGTCGCAGAGGAGGCCGGCGGCGACAACGAGCGCATGCTCTTCCACGGCTCGCCCTTCATCAACGCCATCGTGCAGAAGGGCTTCGACGAGAGGCACGCCTACATCGGGGGCATGTTCGGCGCCGGGATATACTTCGCGGAGCACTCCTCGAAGAGCAACCAGTACGTGTACGGGTTCGGCGGTGGCTCGGGCTGCCCCGCGCACAAGGACCGGAGCTGCTACCTCTGCCACAGACAGATGCTGCTGTGCCGCGTGACCCTGGGCCGCGGGTTCCAGCTGCTGAGCGCGATGAAGATGGCGCACGCGCCGCCCGGGCACCACTCGGTGGCGGGCCGGCCCTCGCAGGGGGGGCTCTGCTTTCCGGAGTACGTGGTCTACAGGGGGGAGCAGGCCTACCCCGAGTACCTGATCACGTATCAGATCGTGAGCAGCGAGAGCGGCCCGGGCGAGGTGTGA
Protein
MAENFRSAADACTNAAAVRLLEAARTGDVETARAILDSRPRLVNCRDVDGRHSTPLHFAAGYNRLPLAQLLLQRGADVHAKDKGGLVPLHNACSYGHYEVTELLVSAGAGVNAADLWRFSPLHEAAAKGKADIVRLLLKHGADPTRRNRDGLTPLQLVRAGDSDTADALRGDAALLDAAKRGDLARARKLITPQNVNCRDAHGRNSTPLHLAAGYNNLEVAEALLEAGALVSARDKGGLVPLHNAASYGHLELAALLLRAGTPPNAADRWGFTPLHEAAHKARTQLCALLLAHGADPFLKNQEGQTALELSGAEDVRSLLQDAMTSSAGDVTSSSAPVPPPAPLPPPSHPVLMPSGDTVQLALPVLPSNYWAEGSRGSLEDAAGRPASALSTSESLQTFLASVGLEQLGPLLEREQITVDILCEMSHEDLRAVGVAAYGHRHRLLKAARRTAHAANEWYGGTTLVEVTPSGEGGEYAVLEREMQASVRAHREHAGGHFTHYNVVKIQKIVNGRVWERYQHRRREVAEEAGGDNERMLFHGSPFINAIVQKGFDERHAYIGGMFGAGIYFAEHSSKSNQYVYGFGGGSGCPAHKDRSCYLCHRQMLLCRVTLGRGFQLLSAMKMAHAPPGHHSVAGRPSQGGLCFPEYVVYRGEQAYPEYLITYQIVSSESGPGEV

Summary

Description
Poly-ADP-ribosyltransferase involved in various processes such as Wnt signaling pathway, telomere length and vesicle trafficking. Acts as an activator of the Wnt signaling pathway by mediating poly-ADP-ribosylation (PARsylation) of AXIN1 and AXIN2, 2 key components of the beta-catenin destruction complex: poly-ADP-ribosylated target proteins are recognized by RNF146, which mediates their ubiquitination and subsequent degradation. Also mediates PARsylation of BLZF1 and CASC3, followed by recruitment of RNF146 and subsequent ubiquitination. Mediates PARsylation of TERF1, thereby contributing to the regulation of telomere length. Involved in centrosome maturation during prometaphase by mediating PARsylation of HEPACAM2/MIKI. May also regulate vesicle trafficking and modulate the subcellular distribution of SLC2A4/GLUT4-vesicles. May be involved in spindle pole assembly through PARsylation of NUMA1. Stimulates 26S proteasome activity.
Catalytic Activity
NAD(+) + (ADP-D-ribosyl)(n)-acceptor = nicotinamide + (ADP-D-ribosyl)(n+1)-acceptor.
L-aspartyl-[protein] + NAD(+) = 4-O-(ADP-D-ribosyl)-L-aspartyl-[protein] + nicotinamide
L-glutamyl-[protein] + NAD(+) = 5-O-(ADP-D-ribosyl)-L-glutamyl-[protein] + nicotinamide
Subunit
Oligomerizes and associates with TNKS2. Interacts with the cytoplasmic domain of LNPEP/Otase in SLC2A4/GLUT4-vesicles. Binds to the N-terminus of telomeric TERF1 via the ANK repeats. Found in a complex with POT1; TERF1 and TINF2. Interacts with AXIN1. Interacts with AXIN2. Interacts with BLZF1 and CASC3. Interacts with NUMA1.
Keywords
3D-structure   ADP-ribosylation   Alternative splicing   ANK repeat   Cell cycle   Cell division   Chromosome   Complete proteome   Cytoplasm   Cytoskeleton   Glycosyltransferase   Golgi apparatus   Membrane   Metal-binding   Mitosis   mRNA transport   NAD   Nuclear pore complex   Nucleus   Phosphoprotein   Protein transport   Reference proteome   Repeat   Telomere   Transferase   Translocation   Transport   Ubl conjugation   Wnt signaling pathway   Zinc  
Feature
chain  Poly [ADP-ribose] polymerase
splice variant  In isoform 2.
EC Number
2.4.2.-
2.4.2.30
EMBL
BABH01040453    BABH01040454    BABH01040455    BABH01040456    BABH01040457    BABH01040458    + More
BABH01040459    BABH01040460    GEZM01035988    JAV83056.1    KQ971311    EEZ98998.2    CH477270    EAT45334.1    NEVH01007830    PNF35046.1    KK852508    KDR22389.1    KK121746    KFM81130.1    GL436716    EFN71576.1    KK107321    QOIP01000002    EZA52680.1    RLU25868.1    GL762889    EFZ20592.1    KQ978060    KYM97722.1    GL888033    EGI69089.1    ADTU01000870    ADTU01000871    KQ983012    KYQ48357.1    KQ978765    KYN28533.1    GBYB01008974    JAG78741.1    KQ976423    KYM88769.1    GFDL01000945    JAV34100.1    UFQT01001759    SSX31685.1    GBRD01005747    JAG60074.1    GBYB01007147    JAG76914.1    GDHC01000890    JAQ17739.1    GGFJ01000930    MBW50071.1    GGFJ01000832    MBW49973.1    AXCM01002785    GGFL01004746    MBW68924.1    KQ434803    KZC05918.1    GGFK01006574    MBW39895.1    GGFL01006400    MBW70578.1    GGFL01004747    MBW68925.1    ADMH02001488    ETN62341.1    GGFL01002620    MBW66798.1    SSX31686.1    AAAB01008987    EAA01120.5    APCN01002058    ACPB03016273    GEDC01012798    JAS24500.1    GFDF01007744    JAV06340.1    JH816438    EKC35064.1    GFDF01007706    JAV06378.1    GBBI01002421    JAC16291.1    HACA01025880    CDW43241.1    AJWK01022423    AJWK01022424    AJWK01022425    GAMC01007023    JAB99532.1    GACK01008571    JAA56463.1    NNAY01000286    OXU29487.1    KZ288271    PBC29847.1    APGK01019502    KB740107    KB631715    ENN81354.1    ERL85556.1    NEDP02004212    OWF46301.1    GANP01007090    JAB77378.1    AFYH01184463    AFYH01184464    AFYH01184465    AFYH01184466    AFYH01184467    AFYH01184468    AFYH01184469    AFYH01184470    AFYH01184471    AFYH01184472    KQ423006    KOF73754.1    JRES01000624    KNC29813.1    HAEB01015887    SBQ62414.1    FR904938    CDQ73931.1    KB108646    ELK28891.1    KE162005    EPQ06383.1    GGMR01017240    MBY29859.1    CYRY02027197    VCW99007.1    JXUM01125409    JXUM01125410    JXUM01125411    KQ566943    KXJ69712.1    AK048860    AC122458    BC057370    HAED01002529    SBQ88374.1    ACTA01108263    ACTA01116263    ACTA01124263    ACTA01132263    ACTA01140263    ACTA01148262    ACTA01156261    ACTA01164260    ACTA01172258    ACTA01180256    JARO02001424    KPP75515.1    HAEG01009311    SBR84186.1    GCES01013909    JAR72414.1    RAZU01000044    RLQ78167.1    GCES01126062    JAQ60260.1    GCES01059208    JAR27115.1    HAEF01001937    SBR39319.1    JW863396    AFO95913.1    HAEH01019937    SBS10000.1    JH000169    EGV98450.1    AMGL01073033    AMGL01073034    AMGL01073035    AMGL01073036    AMGL01073037    AMGL01073038   
Pfam
PF00023   Ank        + More
PF00536   SAM_1
PF00644   PARP
PF12796   Ank_2
PF13606   Ank_3
PF07647   SAM_2
PF06911   Senescence
PF00046   Homeodomain
Interpro
IPR012317   Poly(ADP-ribose)pol_cat_dom        + More
IPR001660   SAM       
IPR002110   Ankyrin_rpt       
IPR013761   SAM/pointed_sf       
IPR036770   Ankyrin_rpt-contain_sf       
IPR028731   TANK1       
IPR020683   Ankyrin_rpt-contain_dom       
IPR009686   Senescence/spartin       
IPR009057   Homeobox-like_sf       
IPR001356   Homeobox_dom       
IPR017970   Homeobox_CS       
SUPFAM
SSF48403   SSF48403        + More
SSF47769   SSF47769       
SSF46689   SSF46689       
Gene 3D
PDB
5OWT     E-value=1.38294e-86,     Score=817

Ontologies

Topology

Subcellular location
Nucleus  
Cytoplasm   Associated with the Golgi and with juxtanuclear SLC2A4/GLUT4-vesicles. A minor proportion is also found at nuclear pore complexes and around the pericentriolar matrix of mitotic centromeres. During interphase, a small fraction of TNKS is found in the nucleus, associated with TERF1. Localizes to spindle poles at mitosis onset via interaction with NUMA1.   With evidence from 3 publications.
Golgi apparatus membrane   Associated with the Golgi and with juxtanuclear SLC2A4/GLUT4-vesicles. A minor proportion is also found at nuclear pore complexes and around the pericentriolar matrix of mitotic centromeres. During interphase, a small fraction of TNKS is found in the nucleus, associated with TERF1. Localizes to spindle poles at mitosis onset via interaction with NUMA1.   With evidence from 3 publications.
Cytoskeleton   Associated with the Golgi and with juxtanuclear SLC2A4/GLUT4-vesicles. A minor proportion is also found at nuclear pore complexes and around the pericentriolar matrix of mitotic centromeres. During interphase, a small fraction of TNKS is found in the nucleus, associated with TERF1. Localizes to spindle poles at mitosis onset via interaction with NUMA1.   With evidence from 3 publications.
Microtubule organizing center   Associated with the Golgi and with juxtanuclear SLC2A4/GLUT4-vesicles. A minor proportion is also found at nuclear pore complexes and around the pericentriolar matrix of mitotic centromeres. During interphase, a small fraction of TNKS is found in the nucleus, associated with TERF1. Localizes to spindle poles at mitosis onset via interaction with NUMA1.   With evidence from 3 publications.
Centrosome   Associated with the Golgi and with juxtanuclear SLC2A4/GLUT4-vesicles. A minor proportion is also found at nuclear pore complexes and around the pericentriolar matrix of mitotic centromeres. During interphase, a small fraction of TNKS is found in the nucleus, associated with TERF1. Localizes to spindle poles at mitosis onset via interaction with NUMA1.   With evidence from 3 publications.
Nuclear pore complex   Associated with the Golgi and with juxtanuclear SLC2A4/GLUT4-vesicles. A minor proportion is also found at nuclear pore complexes and around the pericentriolar matrix of mitotic centromeres. During interphase, a small fraction of TNKS is found in the nucleus, associated with TERF1. Localizes to spindle poles at mitosis onset via interaction with NUMA1.   With evidence from 3 publications.
Chromosome   Associated with the Golgi and with juxtanuclear SLC2A4/GLUT4-vesicles. A minor proportion is also found at nuclear pore complexes and around the pericentriolar matrix of mitotic centromeres. During interphase, a small fraction of TNKS is found in the nucleus, associated with TERF1. Localizes to spindle poles at mitosis onset via interaction with NUMA1.   With evidence from 3 publications.
Telomere   Associated with the Golgi and with juxtanuclear SLC2A4/GLUT4-vesicles. A minor proportion is also found at nuclear pore complexes and around the pericentriolar matrix of mitotic centromeres. During interphase, a small fraction of TNKS is found in the nucleus, associated with TERF1. Localizes to spindle poles at mitosis onset via interaction with NUMA1.   With evidence from 3 publications.
Spindle pole   Associated with the Golgi and with juxtanuclear SLC2A4/GLUT4-vesicles. A minor proportion is also found at nuclear pore complexes and around the pericentriolar matrix of mitotic centromeres. During interphase, a small fraction of TNKS is found in the nucleus, associated with TERF1. Localizes to spindle poles at mitosis onset via interaction with NUMA1.   With evidence from 3 publications.
Length:
675
Number of predicted TMHs:
0
Exp number of AAs in TMHs:
0.01161
Exp number, first 60 AAs:
7e-05
Total prob of N-in:
0.00045
outside
1  -  675
 
 

Population Genetic Test Statistics

Pi
19.538582
Theta
19.049921
Tajima's D
-1.813804
CLR
1009.048485
CSRT
0.0264486775661217
Interpretation
Uncertain
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