SGID Silkworm Genome Informatics Database
Gene
KWMTBOMO14614  Validated by peptides from experiments
Pre Gene Modal
BGIBMGA008775
Annotation
PREDICTED:_mediator_of_RNA_polymerase_II_transcription_subunit_28_[Bombyx_mori]
Location in the cell
Nuclear   Reliability : 3.324
 

Sequence

CDS
ATGCCTGCTTGTCTGAATGTGTTGACGAAGCAAGAAGCTTCACCATGCGCCGAAAAGGAGGAAGTCAAAGTAGAGGTAGAACGATTCATCGATCTCGCCAGACAGATGGAAGCATTCTTCCTGCAGAAAAGATTTCTTCTATCCGCTATGAAACCTGAACTCTTGGTCAGAGAGGACAATAATGAGTTAAAATGTGAACTGCAGAGGAAAGAAGAGCTACTCCGGAGACATTATGATAAGATAACACAATGGCAAAGTCTCTTAGCTGATTTGCAGGGTCACACCGGCTACAACAAATGCCAGCAGCAGCAGCAGTCCTCGCAGCAGAGTATGCAGCAGGCGCCTTCGCCACGCCAGCAACCCTGCAACGTACAGCAAAACGTTCAGACTCAGCAAGCGGTGTCGCCGCGTCAGCAACCCTGCGCCGTGCAACAAAGCGTTCAGGCTCAGCAGATGGCGGCTGCGGCTGCCGCTCAGCAGGTCGCCCTCCAGCAGCAAGCCGCGCTGCAACAACAGCAGATGCAGAACAGTCTAGCTCATAGCATGTTCATGGCAAGTGGGCGTGGCGGCTACGCTGGAGGCTCGCTGCCGGGACCACTGGCGTACTTGGAGAAAACTGCCACCAATATAGGTACAGAACCTTTTCGTAACTTCGTAAGATGGTAG
Protein
MPACLNVLTKQEASPCAEKEEVKVEVERFIDLARQMEAFFLQKRFLLSAMKPELLVREDNNELKCELQRKEELLRRHYDKITQWQSLLADLQGHTGYNKCQQQQQSSQQSMQQAPSPRQQPCNVQQNVQTQQAVSPRQQPCAVQQSVQAQQMAAAAAAQQVALQQQAALQQQQMQNSLAHSMFMASGRGGYAGGSLPGPLAYLEKTATNIGTEPFRNFVRW

Summary

Uniprot
ProteinModelPortal

Ontologies

GO

Topology

Length:
221
Number of predicted TMHs:
0
Exp number of AAs in TMHs:
0.03015
Exp number, first 60 AAs:
0
Total prob of N-in:
0.06303
outside
1  -  221
 
 

Population Genetic Test Statistics

Pi
340.267854
Theta
201.886512
Tajima's D
2.57372
CLR
0.165747
CSRT
0.953502324883756
Interpretation
Uncertain
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