Gene

KWMTBOMO14597

Annotation

PREDICTED:_zinc_finger_protein_26-like_[Bombyx_mori]

Location

Bomo_Chr24(+):11031579-11045363      View in EpiBrowser

Location in the cell

Nuclear   Reliability : 2.161

CDS

ATGCGAAGGCGAAGACGCGCGAACAACATCCTCCCCGAGGAATCGGAACGTCGCATCGCCAAGACAATGATGCGACGTAACGCGACCACTATACTGGAGTGCTCGACCGCGTGGCCCTTCCGGTGGTACCACGGCGCGTTTTACTGCTCCTACTGCGACGCTAAATACCCCGAAGTGCACTCGCTTCGGCACCACGTTATCGGGAACCATTCGGACGAGCAGCCCGGCAAAAAGATATTCGCGAAATTAACGGAAAACAACATGGTCAAAGTGGAAGTGTCCGGTCTGCGTTGTCGGCTCTGTCGTTCTAGTTTCGATAGCTTAGCGTTGCTCAAGGACCACGTGGTCGCCGGTCACGGCCCTGACGAGGACGAGGCCACTGAAGGACCGACCATCAAAATCAAGTGGAAGAAAAAACAAGGGTCAAACGAGACGAAAGTCTGGGTACCGAAAAGCAAATATCACGACCACAGGGACAACGCGTGTATCATAATCGAATGTTCGAACGTAGTGCCGTTCAGGTGGAAACGTGGCTTGTTCCACTGCGGCTACTGCGAACTGAACTTTGGCGACATTCAAAGTATCAAAATACATTCAGTTGTCCATCCGAACAGGATCGAGGCGGTCCGACACGCCAGGACGTATTCTAACGTTAAAATCGAAATATCGGATCTGAGGTGTGAGCTGTGCCTTCAGAGCATGGACAGCGTCGAGGAGTTCGCGGAACATCTCATCGACTCCCACGGGAAACCGATCAGAAAGGAAAAGGGCTTGGGAGTGACGCCCTATATTATGAGAGATGGGGAGTTTATATGCGGGTTTTATGATGCCCAGTAA

Protein

MRRRRRANNILPEESERRIAKTMMRRNATTILECSTAWPFRWYHGAFYCSYCDAKYPEVHSLRHHVIGNHSDEQPGKKIFAKLTENNMVKVEVSGLRCRLCRSSFDSLALLKDHVVAGHGPDEDEATEGPTIKIKWKKKQGSNETKVWVPKSKYHDHRDNACIIIECSNVVPFRWKRGLFHCGYCELNFGDIQSIKIHSVVHPNRIEAVRHARTYSNVKIEISDLRCELCLQSMDSVEEFAEHLIDSHGKPIRKEKGLGVTPYIMRDGEFICGFYDAQ

Uniprot

H9JGW7   A0A2A4J9B0   A0A0N0P9Y2   A0A194RAB4   A0A0L7LKX9   H9JGW5   + More
A0A2A4J7C4   A0A0N1PEC3   A0A194R9N0   A0A2W1CJD2   A0A212FM29   A0A2A4K5M3   A0A194R9N5   A0A0N0P9L7   A0A2H1WCN7   A0A2W1BKE3   A0A2A4K7B4   A0A2A4J899   A0A2W1BJ82   A0A2H1VPT0   A0A2H1VFV9   A0A0L7LLH6   A0A2H1VN37   A0A2A4K5P5   A0A0L7KT37   A0A194RE62   A0A2A4J789   A0A212FM41   A0A2A4K655   A0A2W1BTX6   A0A0N0PEI0   A0A2W1BDN3   A0A0L7LG70   H9JGZ9   A0A2H1VCI0   A0A0N0P9L3   A0A0L7L9S7   H9JGV0   A0A0N0P9L6   A0A0L7KT95   A0A2H1WDA4   I4DPX2   A0A0L7L9T0   A0A0N1PFT1   A0A3S2NAG6   A0A0L7L463   A0A0N1I4T9   A0A0L7KT45  

Pubmed

19121390    26354079    26227816    28756777    22118469    22651552    + More

EMBL

BABH01037780    NWSH01002560    PCG67983.1    KQ459348    KPJ01330.1    KQ460500    + More
KPJ14215.1    JTDY01000693    KOB76193.1    BABH01037781    BABH01037782    PCG67985.1    KPJ01331.1    KPJ14214.1    NHMN01023780    PZC87382.1    AGBW02007657    OWR54803.1    NWSH01000101    PCG79545.1    KPJ14219.1    KPJ01332.1    ODYU01007784    SOQ50841.1    KZ150113    PZC73306.1    PCG79542.1    PCG67986.1    PZC73307.1    ODYU01003449    SOQ42244.1    ODYU01002343    SOQ39719.1    KOB76194.1    SOQ42245.1    PCG79551.1    JTDY01005941    KOB66448.1    KPJ14216.1    PCG67987.1    OWR54801.1    PCG79549.1    KZ149901    PZC78532.1    KQ459805    KPJ19901.1    PZC73312.1    JTDY01001204    KOB74548.1    BABH01037837    ODYU01001825    SOQ38558.1    KPJ01319.1    JTDY01002088    KOB72139.1    BABH01037808    KPJ01329.1    JTDY01006056    KOB66330.1    SOQ50842.1    AK403822    BAM19962.1    KOB72140.1    KPJ01318.1    RSAL01000335    RVE42467.1    JTDY01003077    KOB70190.1    KPJ01328.1    KOB66447.1   

Proteomes

UP000005204    UP000218220    UP000053268    UP000053240    UP000037510    UP000007151    + More
UP000283053   

PRIDE

H9JGW7    H9JGW5    H9JGZ9    H9JGV0   

Pfam

PF00096   zf-C2H2        + More
PF12756   zf-C2H2_2
PF07776   zf-AD

Interpro

IPR013087   Znf_C2H2_type        + More
IPR036236   Znf_C2H2_sf       
IPR003604   Matrin/U1-like-C_Znf_C2H2       
IPR041661   ZN622/Rei1/Reh1_Znf-C2H2       
IPR003656   Znf_BED       
IPR011031   Multihaem_cyt       
IPR036280   Multihaem_cyt_sf       
IPR012934   Znf_AD       

SUPFAM

SSF57667   SSF57667        + More
SSF48695   SSF48695       

ProteinModelPortal

H9JGW7   A0A2A4J9B0   A0A0N0P9Y2   A0A194RAB4   A0A0L7LKX9   H9JGW5   + More
A0A2A4J7C4   A0A0N1PEC3   A0A194R9N0   A0A2W1CJD2   A0A212FM29   A0A2A4K5M3   A0A194R9N5   A0A0N0P9L7   A0A2H1WCN7   A0A2W1BKE3   A0A2A4K7B4   A0A2A4J899   A0A2W1BJ82   A0A2H1VPT0   A0A2H1VFV9   A0A0L7LLH6   A0A2H1VN37   A0A2A4K5P5   A0A0L7KT37   A0A194RE62   A0A2A4J789   A0A212FM41   A0A2A4K655   A0A2W1BTX6   A0A0N0PEI0   A0A2W1BDN3   A0A0L7LG70   H9JGZ9   A0A2H1VCI0   A0A0N0P9L3   A0A0L7L9S7   H9JGV0   A0A0N0P9L6   A0A0L7KT95   A0A2H1WDA4   I4DPX2   A0A0L7L9T0   A0A0N1PFT1   A0A3S2NAG6   A0A0L7L463   A0A0N1I4T9   A0A0L7KT45  

KEGG

101737348    K09228 KRAB domain-containing zinc finger protein | (RefSeq) zinc finger protein 26-like

GO

GO:0003676   GO:0008270   GO:0003677   GO:0005634   GO:0016021   GO:0046872   GO:0006101   GO:0003824   GO:0008152   GO:0016491   GO:0015930  

Length:

278

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

0.21585

Exp number, first 60 AAs:

0.21456

Total prob of N-in:

0.50311

outside

1  -  278

 

 

Pi

200.128409

Theta

170.277356

Tajima's D

0.894236

CLR

0.56464

CSRT

0.631118444077796

Interpretation

Uncertain