SGID Silkworm Genome Informatics Database
Gene
KWMTBOMO14589
Pre Gene Modal
BGIBMGA008782
Annotation
PREDICTED:_PR_domain_zinc_finger_protein_5-like_[Bombyx_mori]
Location in the cell
Nuclear   Reliability : 2.884
 

Sequence

CDS
ATGTGTATTTGTCTGCCTGTACATCAGAACACCGACATAGTCCTGCATTACTTAAATCCTAAAACAGAAACGAAACCACCGAAAGAAGAGAAACTGAATCCCGAAAACGTGCAGCTCCCAGAGAAACCATCGAAGCTTCTAGAAGACGATGGCGGCGGAGGGACGGACTGGACCAATTCGTCGTCCGACTCAGACAAGCCGATCAAGAGGAAGGTCAAGGCCGGCAGGAAAAAGAAGAACGGCGTTCAGAAGAAGGAAGGAAAAACGAAATTAGGGAAGAGGAAAAGTGGGACGGCCCAATCGAAAAAGAGCCGCGCCCTGAAGCCGCAGATCGAAAAAAAAAACAATCACGATCGGGACTTGGACTGCATGGCCGAGGAGAACTTAATGACAATCGTCCAATATTCGTACGTTTGCCCGTTCAAGAACAGACGCAACAACTATTACTGCTTCTACTGCAAGGACTACTACCCGAAGCCCGAGGATCTGAGGTCGCACACGCTCCAGCACGACACGAAGCCGTTCCAATTGCTGATGGGCTACAAGAAGATGCCCAAGCTGGACATAACGCGCATCGATTGCAAACTATATGCACGTTGA
Protein
MCICLPVHQNTDIVLHYLNPKTETKPPKEEKLNPENVQLPEKPSKLLEDDGGGGTDWTNSSSDSDKPIKRKVKAGRKKKNGVQKKEGKTKLGKRKSGTAQSKKSRALKPQIEKKNNHDRDLDCMAEENLMTIVQYSYVCPFKNRRNNYYCFYCKDYYPKPEDLRSHTLQHDTKPFQLLMGYKKMPKLDITRIDCKLYAR

Summary

Uniprot
Pfam
PF00096   zf-C2H2
Interpro
IPR012934   Znf_AD        + More
IPR036236   Znf_C2H2_sf       
IPR013087   Znf_C2H2_type       
SUPFAM
SSF57667   SSF57667       
ProteinModelPortal

Ontologies

Topology

Length:
199
Number of predicted TMHs:
0
Exp number of AAs in TMHs:
0.00037
Exp number, first 60 AAs:
0
Total prob of N-in:
0.11531
outside
1  -  199
 
 

Population Genetic Test Statistics

Pi
270.598663
Theta
185.726437
Tajima's D
1.625706
CLR
0.163063
CSRT
0.816609169541523
Interpretation
Uncertain
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