Gene

KWMTBOMO14586

Annotation

PREDICTED:_zinc_finger_protein_100-like_[Amyelois_transitella]

Location

Bomo_Chr24(+):10881199-10889113      View in EpiBrowser

Transcription factor

zf-C2H2

Location in the cell

Nuclear   Reliability : 3.051

CDS

ATGTCGAATAAGAAATACGGAGAATGCAGGTGTTGTTCAGCAAAAGGCAAACACAGAGATATTACGAAGGAATATTATCACAATGGTCTAAGAGAAGTGTTCATTGACAATTTTATCGACTGCTTCAATTTATTTTTATCAACTCACAAACAGCTGACAACATTAATTTGTTCGAGTTGTGTATCAAGGCTCCGGGATGCATGTTGCTTCAGGAACCTAGTCGTAAATACAGAACGGAAACTTCTAGAAGCTGTTGGAGGTCAGGGGCAGCCTGTCTTTGTCAATGTTCCAGTCGATGAATCGTCACCAGACACAGAGTTTGATATAAAGGTAGAACAAAACAGTGACATAAAGGAGGAGCCTCAGGACTCAGATGATGAACTCCTCGGCCTAGATAATACTGTTGATGACGATTATGATATCGACTTGGATGTGAGAGAGGATCTGGTGGAGGGCGAGGAAGAGTTACTGGCTCGGTTCAGGAGCGAAGTTCTAGATCCACTTCCTACTAGGCACACTTTAAGACAGATATGTCCTAATTACGCCAGACATTTGGATTTGCTCAAGGGAATAACGGTATTCCCTAGGACGTTAAAGAAACTACTCAAAGAGAATGAGAGCAGGCGTCCCATGATCGCCGGCAATGTCTACATAACCGAGAAAGTGGCTCAGGTCGTCAACGCGACCACACTCTTAAAATATTCGAACATGACGCCCTTCAAAAGCAGAGGCCGGAAGGGATTCTTGTGTTTCTATTGTCCGAATATATTCGAGAGCGCAACAAAACTCCGCGAGCACACCTCCGAACACGACAAGGAACTGATTAACGGCATCCTGAAGACGTTCGCGTGCGCAGTCTGCGGCCAGGCTTTTGTGCAGAAATGCAGCTTAAAGGGACACATGAAGACGCACCATCTCGAATATAATTTAGCATAA

Protein

MSNKKYGECRCCSAKGKHRDITKEYYHNGLREVFIDNFIDCFNLFLSTHKQLTTLICSSCVSRLRDACCFRNLVVNTERKLLEAVGGQGQPVFVNVPVDESSPDTEFDIKVEQNSDIKEEPQDSDDELLGLDNTVDDDYDIDLDVREDLVEGEEELLARFRSEVLDPLPTRHTLRQICPNYARHLDLLKGITVFPRTLKKLLKENESRRPMIAGNVYITEKVAQVVNATTLLKYSNMTPFKSRGRKGFLCFYCPNIFESATKLREHTSEHDKELINGILKTFACAVCGQAFVQKCSLKGHMKTHHLEYNLA

Uniprot

A0A2A4JD46   A0A2H1W1N2   A0A3S2PBY9   A0A0N0PDP7   A0A2W1BB14   A0A212FGJ9   + More
H9JGY7   H9JGY8   A0A3S2NBW7   A0A3S2LYM8   H9JGU3   A0A0N0P9X6   H9JGV8   A0A2A4J945   A0A212FGJ0   A0A2A4K5P2   A0A212FGI7   A0A212FGL8   H9JGW1   A0A2A4JIU7   A0A2W1BKF2   A0A2A4K7C4   A0A194RAC3   A0A2H1VCI6   A0A212ESM8   A0A2H1W7P8   A0A0N0PET9   A0A0N1IN28   A0A2H1W6G6   A0A194R9B4   A0A3S2L6W4   A0A3S2NKW4   A0A0L7L8B2   A0A1E1WEJ1   A0A0N0P9L4   A0A1E1VY23   A0A0N1PHE9   A0A2W1BU48  

Pubmed

26354079    28756777    22118469    19121390    26227816   

EMBL

NWSH01001894    PCG69769.1    ODYU01005781    SOQ47000.1    RSAL01000113    RVE47005.1    + More
KQ460130    KPJ17537.1    KZ150324    PZC71395.1    AGBW02008654    OWR52857.1    BABH01037794    BABH01037801    BABH01037802    RVE47007.1    RVE47008.1    BABH01037827    BABH01037828    BABH01037829    KQ459348    KPJ01310.1    BABH01037792    BABH01037793    NWSH01002560    PCG67980.1    AGBW02008655    OWR52854.1    NWSH01000101    PCG79547.1    OWR52852.1    OWR52853.1    BABH01037786    BABH01037787    BABH01037788    NWSH01001274    PCG71891.1    KZ150113    PZC73316.1    PCG79550.1    KQ460500    KPJ14225.1    ODYU01001825    SOQ38559.1    AGBW02012775    OWR44479.1    ODYU01006883    SOQ49125.1    KQ459805    KPJ19902.1    KPJ01325.1    ODYU01006648    SOQ48679.1    KPJ14222.1    RVE47010.1    RSAL01000335    RVE42465.1    JTDY01002272    KOB71753.1    GDQN01005632    JAT85422.1    KPJ01322.1    GDQN01011465    JAT79589.1    KPJ17536.1    KZ149901    PZC78539.1   

Proteomes

UP000218220    UP000283053    UP000053240    UP000007151    UP000005204    UP000053268    + More
UP000037510   

PRIDE

H9JGY7    H9JGY8    H9JGU3    H9JGV8    H9JGW1   

Pfam

PF07776   zf-AD        + More
PF00096   zf-C2H2
PF12756   zf-C2H2_2
PF05225   HTH_psq

Interpro

IPR013087   Znf_C2H2_type        + More
IPR012934   Znf_AD       
IPR036236   Znf_C2H2_sf       
IPR003656   Znf_BED       
IPR041661   ZN622/Rei1/Reh1_Znf-C2H2       
IPR009057   Homeobox-like_sf       
IPR007889   HTH_Psq       

SUPFAM

SSF57667   SSF57667        + More
SSF46689   SSF46689       

ProteinModelPortal

A0A2A4JD46   A0A2H1W1N2   A0A3S2PBY9   A0A0N0PDP7   A0A2W1BB14   A0A212FGJ9   + More
H9JGY7   H9JGY8   A0A3S2NBW7   A0A3S2LYM8   H9JGU3   A0A0N0P9X6   H9JGV8   A0A2A4J945   A0A212FGJ0   A0A2A4K5P2   A0A212FGI7   A0A212FGL8   H9JGW1   A0A2A4JIU7   A0A2W1BKF2   A0A2A4K7C4   A0A194RAC3   A0A2H1VCI6   A0A212ESM8   A0A2H1W7P8   A0A0N0PET9   A0A0N1IN28   A0A2H1W6G6   A0A194R9B4   A0A3S2L6W4   A0A3S2NKW4   A0A0L7L8B2   A0A1E1WEJ1   A0A0N0P9L4   A0A1E1VY23   A0A0N1PHE9   A0A2W1BU48  

PDB

2COT     E-value=0.00582192,     Score=92

KEGG

101745960    K22534 PR domain zinc finger protein 5 | (RefSeq) zinc finger protein 226-like

GO

GO:0003676   GO:0008270   GO:0005634   GO:0003677   GO:0046872   GO:0006101   GO:0003824   GO:0008152   GO:0016491   GO:0015930  

Length:

311

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

0.21476

Exp number, first 60 AAs:

0.01045

Total prob of N-in:

0.13380

outside

1  -  311

 

 

Pi

179.879884

Theta

140.041549

Tajima's D

0.454096

CLR

0.06347

CSRT

0.505624718764062

Interpretation

Uncertain