Gene

KWMTBOMO14583

Pre Gene Modal

BGIBMGA008785

Annotation

putative_zinc_finger_protein_84_[Danaus_plexippus]

Location

Bomo_Chr24(-):10808245-10817718      View in EpiBrowser

Location in the cell

Nuclear   Reliability : 3.744

CDS

ATGAAAGAGTATTACCACGACGGTATACGAGAGGTTTACTTCGATCTATTCATGGAATGTTTCAACATGTTTTTGTCGACAAACGAAAAGCTAACAACATTAATATGCAAATCATGTATTACAAAGCTAAGACATGCAAGCAGTTTCAAGTTAATGGCTGAGAATACAGAGAAGCAGCTACTAGACGAATTGGTACTCAGAGATGACAAGAATACCGTGTTTGTTAATGTGCCGGTAGAAGACGCAATCTTAGATGATGATCTAATAATAAAAGCTGAAGAGCTGACAGAGGTTAAAGAGGAACCACCAGACTCTGAACCTATGGAAACTGACTTTGATACCGATTATATTGACAATGACAGTGATGTAACAACGAAAAACCATTCGGACACGGAGAAAATGGTGAAAGGCGAATCCGAATTGTTGGCTCGCTTCGATCGAACCGAATTGAAGATGTTGCCAACTAGGAGGGCGCTGCGAGATCTGTGCCCCAACTACGTCAGACACTTGGAGCTGCTGAAAGGTATAGAAGTCGTACCGAGAATGGTGAGGAAGTTACTACAGGAGAACACCAGATTAACGAACAGCAAAAGAGTATACGTAACGGAGAAGGTGGCGCAGATCGTGAACTCGTCGACGCTACTGGAAAATTCCAATATGACCCCGTTCAGGAGTAGGGCCCGTAACGGCTACCCCTGTTTCTATTGCAGAAACACTGTAACAGATTTAAATATCAGCTGA

Protein

MKEYYHDGIREVYFDLFMECFNMFLSTNEKLTTLICKSCITKLRHASSFKLMAENTEKQLLDELVLRDDKNTVFVNVPVEDAILDDDLIIKAEELTEVKEEPPDSEPMETDFDTDYIDNDSDVTTKNHSDTEKMVKGESELLARFDRTELKMLPTRRALRDLCPNYVRHLELLKGIEVVPRMVRKLLQENTRLTNSKRVYVTEKVAQIVNSSTLLENSNMTPFRSRARNGYPCFYCRNTVTDLNIS

Uniprot

H9JGY8   A0A2A4JD46   A0A2H1W1N2   A0A3S2PBY9   A0A0N0PDP7   H9JGY7   + More
A0A212FGJ9   A0A2W1BB14   A0A3S2LYM8   A0A3S2NBW7   A0A2H1W7P8   H9JGU3   A0A194RAC3   A0A2A4K6K7   A0A2A4J945   A0A212FGJ0   H9JGV8   A0A2A4K7C4   A0A0N0P9X6   A0A2W1BKF2   A0A0N0PET9   A0A3S2L6W4   A0A1E1VZJ5   A0A212FGI7   A0A2W1BHY2   A0A2H1VCI6   A0A0N0P9L4   A0A2H1VCI8   A0A2H1W6G6   A0A194R9B9  

Pubmed

19121390    26354079    22118469    28756777   

EMBL

BABH01037801    BABH01037802    NWSH01001894    PCG69769.1    ODYU01005781    SOQ47000.1    + More
RSAL01000113    RVE47005.1    KQ460130    KPJ17537.1    BABH01037794    AGBW02008654    OWR52857.1    KZ150324    PZC71395.1    RVE47008.1    RVE47007.1    ODYU01006883    SOQ49125.1    BABH01037827    BABH01037828    BABH01037829    KQ460500    KPJ14225.1    NWSH01000101    PCG79548.1    NWSH01002560    PCG67980.1    AGBW02008655    OWR52854.1    BABH01037792    BABH01037793    PCG79550.1    KQ459348    KPJ01310.1    KZ150113    PZC73316.1    KQ459805    KPJ19902.1    RVE47010.1    GDQN01010942    JAT80112.1    OWR52852.1    PZC73304.1    ODYU01001825    SOQ38559.1    KPJ01322.1    SOQ38560.1    ODYU01006648    SOQ48679.1    KPJ14227.1   

Proteomes

UP000005204    UP000218220    UP000283053    UP000053240    UP000007151    UP000053268    + More

PRIDE

H9JGY8    H9JGY7    H9JGU3    H9JGV8   

Pfam

PF00096   zf-C2H2        + More
PF07776   zf-AD
PF05225   HTH_psq
PF12756   zf-C2H2_2
PF01391   Collagen

Interpro

IPR013087   Znf_C2H2_type        + More
IPR036236   Znf_C2H2_sf       
IPR012934   Znf_AD       
IPR009057   Homeobox-like_sf       
IPR007889   HTH_Psq       
IPR003656   Znf_BED       
IPR041661   ZN622/Rei1/Reh1_Znf-C2H2       
IPR008160   Collagen       

SUPFAM

SSF57667   SSF57667        + More
SSF46689   SSF46689       

ProteinModelPortal

H9JGY8   A0A2A4JD46   A0A2H1W1N2   A0A3S2PBY9   A0A0N0PDP7   H9JGY7   + More
A0A212FGJ9   A0A2W1BB14   A0A3S2LYM8   A0A3S2NBW7   A0A2H1W7P8   H9JGU3   A0A194RAC3   A0A2A4K6K7   A0A2A4J945   A0A212FGJ0   H9JGV8   A0A2A4K7C4   A0A0N0P9X6   A0A2W1BKF2   A0A0N0PET9   A0A3S2L6W4   A0A1E1VZJ5   A0A212FGI7   A0A2W1BHY2   A0A2H1VCI6   A0A0N0P9L4   A0A2H1VCI8   A0A2H1W6G6   A0A194R9B9  

KEGG

101746246    K22534 PR domain zinc finger protein 5 | (RefSeq) zinc finger protein 260-like

GO

GO:0003676   GO:0008270   GO:0005634   GO:0003677   GO:0006101   GO:0003824   GO:0008152   GO:0016491   GO:0015930  

Length:

246

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

0.01303

Exp number, first 60 AAs:

0.01292

Total prob of N-in:

0.14182

outside

1  -  246

 

 

Pi

231.721074

Theta

169.560088

Tajima's D

1.62888

CLR

0.000011

CSRT

0.814109294535273

Interpretation

Uncertain