Gene

KWMTBOMO14579

Annotation

PREDICTED:_zinc_finger_protein_595-like_isoform_X2_[Plutella_xylostella]

Location

Bomo_Chr24(+):10772289-10785551      View in EpiBrowser

Location in the cell

Nuclear   Reliability : 4.491

CDS

ATGAATAAAACCAATCGCAAGAAGGGGTGTAGGCAAAGATCGAATACAAACAAAACAGAACCGGAACCGACTACTGAAATCACCTTAAACGTTCCAAAAGTTGATTACAGCTCACCTCCATCCATAGCAGCACCTCATGCTCGTCCGGAGCAGCAGTACAGTTTATGCTGCTGCTGTATGGAACTCCCTTGCCCCAAGAACCTGTGGCTTGAATACACCTGGATGGAAAACACCGAAGTCTACGGGCAAATGCTCGAACAATGTTTTGGATTTAATTTCCCAGAAGACATCAGGCCCAAACAGCAGATATGCGAGGTCTGCGTCACGAGGCTCCGGGATTCGGTTCGGTTCAAGAGGCAAGTCGCCGAATGCACCAAGAGACTAATGGACAGCCTTCGAGACGTTAAAATAGCTGCAGGATCAACAGAAAGAATCAAAGAAGAATTCTCGCCCGCGGACCACAACAATGAAATAGACTACCAAGATGACATCCGGAATGACAGCGACGAAATCGAAACAGGAAAACTGAAAGGCGAGTACGTCGAAGAACCCGAGAGGAAATATAAGACCGAAGACAAAATCGTGGGTAGACCGTCGAAAACCAAACAAATCCGCAATGTTGACCCCAAAACGCCGAGAGCGAACATCGGTCTCCTACTCCAACACACAACGATATTGCCGTTCAAATCGAACCGTGGTTACTTCAACTGTTTCTATTGCGGCAAACAATTCGTCGTGATCCAACAGTTGAGAGTACACACGCAAACGGCGCACGGCAACGTTACATTCGCGTCGATCACCAAGAACATCCTGCGACCCAACGATAAAGTCAAAGCGGATATAGGGGAGGTCTCGTGCCGGCTCTGCAGCGAGACCTTGAACGACCTTCCGTATGAGGATGCAGCACTTCGAGGAGGTGCACAACAGATCGCCTCTCGATCTGAGCTGCAAGATCTGCACGAAGGCCTTCAAAACGACCAGCCACCTCGGTTGCCATATGAGAACCGACCATTTCAATATACCGTACGTGAAGAGAAAAAAAAATAA

Protein

MNKTNRKKGCRQRSNTNKTEPEPTTEITLNVPKVDYSSPPSIAAPHARPEQQYSLCCCCMELPCPKNLWLEYTWMENTEVYGQMLEQCFGFNFPEDIRPKQQICEVCVTRLRDSVRFKRQVAECTKRLMDSLRDVKIAAGSTERIKEEFSPADHNNEIDYQDDIRNDSDEIETGKLKGEYVEEPERKYKTEDKIVGRPSKTKQIRNVDPKTPRANIGLLLQHTTILPFKSNRGYFNCFYCGKQFVVIQQLRVHTQTAHGNVTFASITKNILRPNDKVKADIGEVSCRLCSETLNDLPYEDAALRGGAQQIASRSELQDLHEGLQNDQPPRLPYENRPFQYTVREEKKK

Uniprot

A0A2W1BHY2   A0A2H1W4Q3   A0A2H1W2Z8   A0A2H1VCI6   A0A212ESM8   A0A2A4K7C4   + More
A0A2W1BKF2   A0A0N0P9X6   A0A0L7L8B2   A0A1E1WUH1   A0A212FGJ0   A0A212FGI7   A0A212FGL8   A0A0N1I342   A0A0N0PET9   A0A2A4K6K7   H9JGV8   A0A194RAC3   A0A2A4J945   A0A194R9B4   A0A1E1WEJ1   A0A212FM51   A0A2H1W7P8   H9JGY5   A0A3S2NKW4   A0A2A4K5P2   H9JGX2   A0A3S2LYM8   A0A2A4JCT4   A0A0N1IBB3   H9JGW1   A0A194R8P8   A0A2H1VPT0   A0A0N1IN28   A0A2W1BU48   A0A1E1VY23   A0A0N0P9L4   A0A2A4K655   A0A2H1W6G6   A0A2A4JIU7   A0A2H1W1Q8   A0A2W1BTX6   A0A0N1PHE9   H9JGU3   A0A3S2PBY9   S4NL96   A0A2A4JJ58  

Pubmed

28756777    22118469    26354079    26227816    19121390    23622113    + More

EMBL

KZ150113    PZC73304.1    ODYU01006258    SOQ47936.1    ODYU01006008    SOQ47480.1    + More
ODYU01001825    SOQ38559.1    AGBW02012775    OWR44479.1    NWSH01000101    PCG79550.1    PZC73316.1    KQ459348    KPJ01310.1    JTDY01002272    KOB71753.1    GDQN01000613    JAT90441.1    AGBW02008655    OWR52854.1    OWR52852.1    OWR52853.1    KPJ01321.1    KQ459805    KPJ19902.1    PCG79548.1    BABH01037792    BABH01037793    KQ460500    KPJ14225.1    NWSH01002560    PCG67980.1    KPJ14222.1    GDQN01005632    JAT85422.1    AGBW02007657    OWR54806.1    ODYU01006883    SOQ49125.1    BABH01037794    RSAL01000335    RVE42465.1    PCG79547.1    BABH01037767    RSAL01000113    RVE47008.1    NWSH01001894    PCG69771.1    KQ460130    KPJ17535.1    BABH01037786    BABH01037787    BABH01037788    KPJ14213.1    ODYU01003449    SOQ42244.1    KPJ01325.1    KZ149901    PZC78539.1    GDQN01011465    JAT79589.1    KPJ01322.1    PCG79549.1    ODYU01006648    SOQ48679.1    NWSH01001274    PCG71891.1    ODYU01005781    SOQ46998.1    PZC78532.1    KPJ17536.1    BABH01037827    BABH01037828    BABH01037829    RVE47005.1    GAIX01014736    JAA77824.1    NWSH01001214    PCG72097.1   

Proteomes

UP000007151    UP000218220    UP000053268    UP000037510    UP000053240    UP000005204    + More
UP000283053   

PRIDE

H9JGV8    H9JGY5    H9JGX2    H9JGW1    H9JGU3   

Pfam

PF07776   zf-AD        + More
PF00096   zf-C2H2
PF12756   zf-C2H2_2
PF05225   HTH_psq

Interpro

IPR012934   Znf_AD        + More
IPR013087   Znf_C2H2_type       
IPR036236   Znf_C2H2_sf       
IPR003656   Znf_BED       
IPR041661   ZN622/Rei1/Reh1_Znf-C2H2       
IPR007889   HTH_Psq       
IPR009057   Homeobox-like_sf       

SUPFAM

SSF57667   SSF57667        + More
SSF46689   SSF46689       

ProteinModelPortal

A0A2W1BHY2   A0A2H1W4Q3   A0A2H1W2Z8   A0A2H1VCI6   A0A212ESM8   A0A2A4K7C4   + More
A0A2W1BKF2   A0A0N0P9X6   A0A0L7L8B2   A0A1E1WUH1   A0A212FGJ0   A0A212FGI7   A0A212FGL8   A0A0N1I342   A0A0N0PET9   A0A2A4K6K7   H9JGV8   A0A194RAC3   A0A2A4J945   A0A194R9B4   A0A1E1WEJ1   A0A212FM51   A0A2H1W7P8   H9JGY5   A0A3S2NKW4   A0A2A4K5P2   H9JGX2   A0A3S2LYM8   A0A2A4JCT4   A0A0N1IBB3   H9JGW1   A0A194R8P8   A0A2H1VPT0   A0A0N1IN28   A0A2W1BU48   A0A1E1VY23   A0A0N0P9L4   A0A2A4K655   A0A2H1W6G6   A0A2A4JIU7   A0A2H1W1Q8   A0A2W1BTX6   A0A0N1PHE9   H9JGU3   A0A3S2PBY9   S4NL96   A0A2A4JJ58  

KEGG

101746477    no KO assigned | (RefSeq) uncharacterized LOC101746477

GO

GO:0005634   GO:0003676   GO:0008270   GO:0003677   GO:0016021   GO:0046872   GO:0006101   GO:0003824   GO:0008152   GO:0016491   GO:0015930  

Length:

348

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

0.00693999999999999

Exp number, first 60 AAs:

0.00014

Total prob of N-in:

0.28455

outside

1  -  348

 

 

Pi

246.217692

Theta

165.537285

Tajima's D

2.365653

CLR

0.208666

CSRT

0.932603369831508

Interpretation

Uncertain