Gene

KWMTBOMO14560

Pre Gene Modal

BGIBMGA003902

Annotation

PREDICTED:_piggyBac_transposable_element-derived_protein_4-like_[Papilio_xuthus]

Location

Bomo_Chr24(+):10237099-10237917      View in EpiBrowser

Location in the cell

Cytoplasmic   Reliability : 1.628 Mitochondrial   Reliability : 1.727

CDS

ATGAAATTGACTAAGAACTTACTGGAAGAGGGTCGAACTTTAATAGCAGACAACTTTTATACATCTGTTCCATTAGCTGAAGAATTACTAAAAAAGAAGACATTTATGTGTGGTACACTTAGAACCAACAGAGGAGGACTACCTAAGCCCTTCATAAGTAAAAAAATAAAGAAAGGACAAGTTATTGGAAACATGAACAAGAAAGGGGTCAAAGTAATAAAGTGGATGGATAAACGCCAGGTTACAATGATGACGACTGTTAAAGAGCACGACGCGAGTTTGATAGATACGGGGAAAGTGTCAAGAGCAACAAAGCAGCCAATAATGAAGCCACCAAGTATTATTATGTACAATGAAAATAAGAAAGGAGTTGATTTTAGTGACCAAATGACCGCGTATTACTCAACACTTTTGAGAGGACTGAAATGGTATCGCAAGTTAATGATGAATGTTTTATTTGGAACTTACATAGTAAATGCATGGATTGTGCATGAAATGGTAAATGAATGTTCAATCTATGACAAAGACACAATTTACCGATTTCATTGA

Protein

MKLTKNLLEEGRTLIADNFYTSVPLAEELLKKKTFMCGTLRTNRGGLPKPFISKKIKKGQVIGNMNKKGVKVIKWMDKRQVTMMTTVKEHDASLIDTGKVSRATKQPIMKPPSIIMYNENKKGVDFSDQMTAYYSTLLRGLKWYRKLMMNVLFGTYIVNAWIVHEMVNECSIYDKDTIYRFH

Uniprot

A0A2H1X1M1   A0A2H1VNZ4   A0A0L7L5K1   A0A023EYN9   T1I3L1   A0A1B6IUZ3   + More
A0A1B6MGI3   T0MIV2   A0A0P4WIX9   V5GG67   J9MA42   T0MM39   J9JQ12   J9LWR0   A0A1A9VDM4   J9K106   A0A0K0EJ21   A0A182YRA2   A0A0P4W9M6   S4P945   A0A1E1VXQ8   A0A1B6HG03   A0A0N4Y481   J9K6D0   J9JPM8   A0A3P6SFF4   S4PBM2   W6NLG1   J9M7T4   A0A0N4XY30   A0A0D6LDM3   A0A182RWV0   J9LKV2   E2C9Y4   A0A016SIZ8   A0A1B6J0Q3   A0A0N4W5M2   A0A016U6U0   A0A1B6J5E9   A0A016V127   A0A0A9W581   A0A2S2PWY5   A0A212FPU3   A0A0N4XVG7   A0A2S2QDJ8   A0A0D6LHL4   X1X046   J9JVX5   J9KNJ0   J9LK68   A0A016VEZ7   A0A0N4WS15   A0A0C2C4I8   A0A2H8TZ84   J9KXH3   A0A023F0B8   A0A023EYQ2   S4P9J6   A0A1B6MQT6   A0A2S2Q5H6   A0A1E1WHA1   A0A1B6KIH2   X1WU42   X1XDE1   A0A2S2QUS6   A0A0A9W0B8   A0A0N5BEP7   A0A1B6DJ43   A0A0K8TA89   A0A183G7U2   A0A3P8A9A8   A0A2H1WP49   A0A1B0AXK3   A0A0A9X2F2   A0A016VFC3   A0A016VFZ3   A0A1B6L0C0   S4NY54   A0A2S2Q7N7   A0A1B6IXW2   A0A090XCF3   A0A1B6K2A9   A0A1B6LFF4   A0A1B6CPG7   A0A1B6C5Q1   A0A0N4YQB3   A0A090X8N5   A0A1B6H7X0   A0A182HPM2   W4ZHM1   Q7PKD9   A0A084W7H9   A0A0N4UUN0   A0A182KB20   A0A2S2Q116   A0A182V3F3  

Pubmed

26227816    25474469    23829473    25244985    23622113    20798317    + More
25730766    25401762    22118469    26823975    25970599    12364791    14747013    17210077    24438588   

EMBL

ODYU01012748    SOQ59213.1    ODYU01003590    SOQ42555.1    JTDY01002808    KOB70685.1    + More
GBBI01004439    JAC14273.1    ACPB03026393    GECU01016947    JAS90759.1    GEBQ01004953    JAT35024.1    KE647206    EQB60920.1    GDRN01069744    JAI63996.1    GALX01005527    JAB62939.1    ABLF02002863    ABLF02002864    KE647018    EQB62075.1    ABLF02010187    ABLF02050407    ABLF02029982    ABLF02038619    GDRN01075668    JAI63019.1    GAIX01005691    JAA86869.1    GDQN01011536    GDQN01001322    JAT79518.1    JAT89732.1    GECU01034165    JAS73541.1    UYSL01020365    VDL74272.1    ABLF02025866    ABLF02025869    ABLF02025877    ABLF02017387    UYRV01020826    VDK68263.1    GAIX01004551    JAA88009.1    CAVP010060744    CDL96544.1    ABLF02007064    UYSL01019948    VDL71548.1    KE125214    EPB70205.1    ABLF02029983    GL453910    EFN75248.1    JARK01001552    EYB90668.1    GECU01014964    JAS92742.1    UZAF01016313    VDO25445.1    JARK01001390    EYC10641.1    GECU01032257    GECU01013302    JAS75449.1    JAS94404.1    JARK01001356    EYC20951.1    GBHO01041038    JAG02566.1    GGMS01000862    MBY70065.1    AGBW02000393    OWR55781.1    UYSL01019831    VDL70383.1    GGMS01006604    MBY75807.1    KE125300    EPB69401.1    ABLF02011864    ABLF02011866    ABLF02042566    ABLF02030622    ABLF02030627    ABLF02015113    ABLF02011361    JARK01001346    EYC26204.1    UZAF01018515    VDO52364.1    KN776787    KIH44577.1    GFXV01007414    MBW19219.1    ABLF02011601    ABLF02011602    GBBI01004438    JAC14274.1    GBBI01004440    JAC14272.1    GAIX01003729    JAA88831.1    GEBQ01001683    JAT38294.1    GGMS01003657    MBY72860.1    GDQN01004768    JAT86286.1    GEBQ01028741    JAT11236.1    ABLF02018838    ABLF02030707    GGMS01012057    MBY81260.1    GBHO01042743    GDHC01013469    JAG00861.1    JAQ05160.1    GEDC01011621    JAS25677.1    GBRD01003367    JAG62454.1    UZAH01030316    VDP10112.1    ODYU01009999    SOQ54787.1    JXJN01005290    GBHO01032324    JAG11280.1    EYC26339.1    EYC26340.1    GEBQ01022824    JAT17153.1    GAIX01013935    JAA78625.1    GGMS01004555    MBY73758.1    GECU01015929    JAS91777.1    GBIH01001830    JAC92880.1    GECU01002110    JAT05597.1    GEBQ01017560    JAT22417.1    GEDC01022043    JAS15255.1    GEDC01028472    JAS08826.1    UYSL01024178    VDL83170.1    GBIH01001829    JAC92881.1    GECU01037003    GECU01013756    JAS70703.1    JAS93950.1    APCN01003265    AAGJ04151167    AAAB01008986    EAA43299.1    ATLV01021248    KE525315    KFB46173.1    UXUI01007140    VDD85673.1    GGMS01002243    MBY71446.1   

Proteomes

UP000037510    UP000015103    UP000007819    UP000078200    UP000035681    UP000076408    + More
UP000038043    UP000271162    UP000025227    UP000075900    UP000008237    UP000024635    UP000038042    UP000268014    UP000007151    UP000046392    UP000050761    UP000092460    UP000075840    UP000007110    UP000007062    UP000030765    UP000038041    UP000274131    UP000075881    UP000075903   

Pfam

PF13843   DDE_Tnp_1_7        + More
PF02037   SAP
PF05380   Peptidase_A17
PF05699   Dimer_Tnp_hAT
PF00188   CAP
PF13842   Tnp_zf-ribbon_2

Interpro

IPR029526   PGBD        + More
IPR003034   SAP_dom       
IPR036361   SAP_dom_sf       
IPR008042   Retrotrans_Pao       
IPR008906   HATC_C_dom       
IPR012337   RNaseH-like_sf       
IPR014044   CAP_domain       
IPR035940   CAP_sf       
IPR032718   PGBD4_C_Znf-ribbon       

SUPFAM

SSF68906   SSF68906        + More
SSF53098   SSF53098       
SSF55797   SSF55797       

Gene 3D

1.10.720.30     3.40.33.10    

ProteinModelPortal

A0A2H1X1M1   A0A2H1VNZ4   A0A0L7L5K1   A0A023EYN9   T1I3L1   A0A1B6IUZ3   + More
A0A1B6MGI3   T0MIV2   A0A0P4WIX9   V5GG67   J9MA42   T0MM39   J9JQ12   J9LWR0   A0A1A9VDM4   J9K106   A0A0K0EJ21   A0A182YRA2   A0A0P4W9M6   S4P945   A0A1E1VXQ8   A0A1B6HG03   A0A0N4Y481   J9K6D0   J9JPM8   A0A3P6SFF4   S4PBM2   W6NLG1   J9M7T4   A0A0N4XY30   A0A0D6LDM3   A0A182RWV0   J9LKV2   E2C9Y4   A0A016SIZ8   A0A1B6J0Q3   A0A0N4W5M2   A0A016U6U0   A0A1B6J5E9   A0A016V127   A0A0A9W581   A0A2S2PWY5   A0A212FPU3   A0A0N4XVG7   A0A2S2QDJ8   A0A0D6LHL4   X1X046   J9JVX5   J9KNJ0   J9LK68   A0A016VEZ7   A0A0N4WS15   A0A0C2C4I8   A0A2H8TZ84   J9KXH3   A0A023F0B8   A0A023EYQ2   S4P9J6   A0A1B6MQT6   A0A2S2Q5H6   A0A1E1WHA1   A0A1B6KIH2   X1WU42   X1XDE1   A0A2S2QUS6   A0A0A9W0B8   A0A0N5BEP7   A0A1B6DJ43   A0A0K8TA89   A0A183G7U2   A0A3P8A9A8   A0A2H1WP49   A0A1B0AXK3   A0A0A9X2F2   A0A016VFC3   A0A016VFZ3   A0A1B6L0C0   S4NY54   A0A2S2Q7N7   A0A1B6IXW2   A0A090XCF3   A0A1B6K2A9   A0A1B6LFF4   A0A1B6CPG7   A0A1B6C5Q1   A0A0N4YQB3   A0A090X8N5   A0A1B6H7X0   A0A182HPM2   W4ZHM1   Q7PKD9   A0A084W7H9   A0A0N4UUN0   A0A182KB20   A0A2S2Q116   A0A182V3F3  

KEGG

101745018    no KO assigned | (RefSeq) uncharacterized LOC101745018

GO

GO:0016021   GO:0046983  

Length:

182

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

9.88587

Exp number, first 60 AAs:

0.00184

Total prob of N-in:

0.37813

outside

1  -  182

 

 

Pi

295.434746

Theta

223.060643

Tajima's D

1.021705

CLR

0

CSRT

0.667466626668667

Interpretation

Uncertain