Silkworm Genome Informatics Database

Gene

KWMTBOMO14552

Pre Gene Modal

BGIBMGA013783

Annotation

AF461149_1_transposase_[Bombyx_mori]

Location

Bomo_Chr24(-):10097216-10098218 View in EpiBrowser

Full name

Signal transducer and activator of transcription

Location in the cell

Mitochondrial Reliability : 2.127 Nuclear Reliability : 2.205

CDS

ATGAAGACTAGTGTAGATGACAGGTCAAGAAGTGGTCGCCCTCGGTCTGTTAGGACTCCAGCAGTGATAAAAGCTGTGAAGGCGCGAATTCAAAGAAATCCCAAACGTAAGCAGAAATTGTTGGCCCTTCAGATGGGGTTAAGCAGAACCACGGTGAAAAGGGTGTTAAATGAAGACTTAGGGCTTCGGGCATATCGAAGAAAAACAGGACATCGTTTGAATGCTCGTCTAATGGACCTGAGACTGAAGAGATGCCGCGCTTTGTTGAAGCGGCACTGGGTATTCCAACAAGATTCGGCGCCAGCTCATAGAGCGAAGAGCACACAAGACTGGCTGGCGGCGCGTGAAATCGACTTCATCCGGCACGAAGACTGGCCCTCCTCCAGTCCAGATTTGAATCCGTTAGATTACAAGATATGGCAACACTTGGAGGAAAAGGCGTGCTCAAAGCCTCATCCCAATTTGGAGTCACTCAAGACATCCTTGATTAAGGCAGCCGCCGATATTGACATGGACCTCGTTCGTGCTGCGATAGACGACTGGCCGCGCAGATTGAAGGCCTGTATTCAAAATCACGGAGGTCATTTTGAATAA

Protein

MKTSVDDRSRSGRPRSVRTPAVIKAVKARIQRNPKRKQKLLALQMGLSRTTVKRVLNEDLGLRAYRRKTGHRLNARLMDLRLKRCRALLKRHWVFQQDSAPAHRAKSTQDWLAAREIDFIRHEDWPSSSPDLNPLDYKIWQHLEEKACSKPHPNLESLKTSLIKAAADIDMDLVRAAIDDWPRRLKACIQNHGGHFE

Similarity

Belongs to the transcription factor STAT family.
Belongs to the TGF-beta family.

Uniprot

A0A3S2NF68 A0A3S2THT4 A0A3S2LTJ6 A0A3S2NQU1 A0A3S2NNP5 A0A0N4Y9Q8 + More
A0A3S2TER6 A0A3S2NJ26 A0A183F5L1 A0A3P7TF39

EMBL

RSAL01000063 RVE49524.1 RSAL01000131 RVE46422.1 RSAL01000012 RVE53510.1 + More
RSAL01000009 RVE53890.1 RSAL01000200 RVE44486.1 UYSL01020934 VDL76658.1 RSAL01000223 RVE44007.1 RSAL01000677 RVE41245.1 UZAH01001595 VDO19836.1

Proteomes

UP000283053 UP000038043 UP000271162 UP000050761

Pfam

PF01017   STAT_alpha        + More
PF02864   STAT_bind
PF00017   SH2
PF02865   STAT_int
PF00019   TGF_beta
PF02801   Ketoacyl-synt_C
PF00109   ketoacyl-synt
PF16197   KAsynt_C_assoc
PF13358   DDE_3

Interpro

IPR009057   Homeobox-like_sf        + More
IPR012345   STAT_TF_DNA-bd_N
IPR008967   p53-like_TF_DNA-bd
IPR013799   STAT_TF_prot_interaction
IPR013800   STAT_TF_alpha
IPR013801   STAT_TF_DNA-bd
IPR000980   SH2
IPR015988   STAT_TF_coiled-coil
IPR001217   STAT
IPR036535   STAT_N_sf
IPR036860   SH2_dom_sf
IPR001839   TGF-b_C
IPR029034   Cystine-knot_cytokine
IPR017948   TGFb_CS
IPR015615   TGF-beta-rel
IPR032821   KAsynt_C_assoc
IPR014031   Ketoacyl_synth_C
IPR020841   PKS_Beta-ketoAc_synthase_dom
IPR016039   Thiolase-like
IPR014030   Ketoacyl_synth_N
IPR038717   Tc1-like_DDE_dom

SUPFAM

SSF46689   SSF46689        + More
SSF48092   SSF48092
SSF47655   SSF47655
SSF49417   SSF49417
SSF55550   SSF55550
SSF57501   SSF57501
SSF53901   SSF53901

Gene 3D

1.10.532.10 2.60.40.630 3.30.505.10 2.10.90.10 3.40.47.10

ProteinModelPortal

A0A3S2NF68 A0A3S2THT4 A0A3S2LTJ6 A0A3S2NQU1 A0A3S2NNP5 A0A0N4Y9Q8 + More
A0A3S2TER6 A0A3S2NJ26 A0A183F5L1 A0A3P7TF39

PDB

5CR4 E-value=1.18984e-07, Score=130

KEGG

101740752 no KO assigned | (RefSeq) aldo-keto reductase AKR2E4-like

GO

GO:0005737 GO:0005634 GO:0003677 GO:0005576 GO:0008083

PANTHER

PTHR11801 PTHR11848

Subcellular location

Cytoplasm
Nucleus
Secreted

Length:

197

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

0.00063

Exp number, first 60 AAs:

0.00063

Total prob of N-in:

0.37403

outside

1 - 197

Pi

140.835052

Theta

86.02075

Tajima's D

2.582653

CLR

0.474186

CSRT

0.950302484875756

Interpretation

Uncertain

Sequence

Summary

Ontologies

Topology

Population Genetic Test Statistics

Multiple alignment of Orthologues

Gene Tree