Silkworm Genome Informatics Database

Gene

KWMTBOMO14547

Pre Gene Modal

BGIBMGA014408

Annotation

PREDICTED:_uncharacterized_protein_LOC105841853_[Bombyx_mori]

Location

Bomo_Chr24(+):10030559-10032843 View in EpiBrowser

Location in the cell

Nuclear Reliability : 3.992

CDS

ATGGAAGAAGTAGTTGAAGGATCGTTCCAGGAGCCTACTTGTCCACCTACCGGATGCGGCGATGCTGAATTGGCGGCTTATCAACAACAAAAAGATAAGTTTGATAAAACTGATGCCAGCGCTATCCTAATACTTACCACCAATATGCAAGAAGACACACTTCGAAAAGTGATGCGGTTCACTAAAGTACGTGATGTCTGGTTAGAGCTCCACAGGCTGTTCGACGGAACAAATGAGGACAAAACCTACAACCTGTGTATGAGTTTCTTCAGCTTTAAGAGGGATCAAGCAGACAACATAGCTACCCACATGTCAAAATTAAAGAACATTTGGACTGAACTGAATCAAGAACTCAAGAAGGACAATAACCAAGAGCTACCCGAACTGCTACTTGTTTGTAAAATACTGGACACGCTTGACGATTTATACTTCAGCTTCAGAAGTAGTTGGCTCCTCCTGCCCAAATCCAACCGTACTGTAGAAAGCCTAACTAGTCATCTCTGCGCATTTGAAAGGGCACTGCAAGGTAACAATGTACCTTCGCATCATTCGGAAGCCCTGGTTTCGAATACGGAGAAGAAGAAGGACAAGAAGCTTAAATGCAACTACTGCCTAGGTTTTGGCCACAGAGTACGCAACTGTCAAAAATGGATCCGTGACGGTAAACCTCCTAAGTGCCAAAATCCGACCCAGACAGCAACGCCTTCTACTTCAAAGACCGCTAATTTGCTACTCATGTCTTTAGAAGACAACGAAATCTTCACAGTTTCACGGGACAACGAGAGCTGTTACATAGATAATGGTGCAACAAGCCACGTCACCAACAGAGCTGACATTTTCCAAACCTACGAACATTTCAATGAGAACTACACTGTTACAACGGCCGCTGTCGGACACACCATAAAATGCCTGCTAAGTGACAACGGCGGTGAATTTGACAACGCATCCATGAAAAATGTTTTAGACACTCATGGAATAGCACAGCGACTCATCACCCCGTATACACCTGAACAAAACGGAGTAAGCGAAAGGGAGAACAGAACCCTAGTTGAGACAGCAAGATCAATGATGTACGCTCATGAGCCATTACCGCAAGTGCTATGGGCAGAGTTCATTAATACTGCCGCATACATACTAAACAGAACAGGTCCCACAAGTTCAGATAAATCTCCGCATGAACTTTGGTATGAAAAGAAACCTATTATTAAACATCTCCGAATAATAGGCTCAATCGCATACGTCCATATTCCAAAGCAGAAGCGTAGAAAATTCGACAAAAAGGCGATAAAAGGTCGACTTATCGGGTACGACGAAGATTGCTACCGTATCTGGGTCACAGACGGAAAACAGTCGACGCTCGTCCGCTCTCGTGATGTAATTTTCGATGAGAAACCTCTTCCCATCTGTAATAGTGAAATTCCTAAAACAGAAGTTGAGAAACAGAAGTTGTATACCCGATTACCATAA

Protein

MEEVVEGSFQEPTCPPTGCGDAELAAYQQQKDKFDKTDASAILILTTNMQEDTLRKVMRFTKVRDVWLELHRLFDGTNEDKTYNLCMSFFSFKRDQADNIATHMSKLKNIWTELNQELKKDNNQELPELLLVCKILDTLDDLYFSFRSSWLLLPKSNRTVESLTSHLCAFERALQGNNVPSHHSEALVSNTEKKKDKKLKCNYCLGFGHRVRNCQKWIRDGKPPKCQNPTQTATPSTSKTANLLLMSLEDNEIFTVSRDNESCYIDNGATSHVTNRADIFQTYEHFNENYTVTTAAVGHTIKCLLSDNGGEFDNASMKNVLDTHGIAQRLITPYTPEQNGVSERENRTLVETARSMMYAHEPLPQVLWAEFINTAAYILNRTGPTSSDKSPHELWYEKKPIIKHLRIIGSIAYVHIPKQKRRKFDKKAIKGRLIGYDEDCYRIWVTDGKQSTLVRSRDVIFDEKPLPICNSEIPKTEVEKQKLYTRLP

Uniprot

K7JC54 X1XSG1 A0A1Y1K3Q7

Pubmed

20075255 28004739

EMBL

AAZX01015857 AAZX01019482 ABLF02042028 GEZM01099106 GEZM01099105 JAV53487.1 + More

Proteomes

UP000002358 UP000007819

Pfam

PF13976   gag_pre-integrs        + More
PF00665   rve
PF07727   RVT_2
PF00098   zf-CCHC

Interpro

IPR013103   RVT_2        + More
IPR012337   RNaseH-like_sf
IPR001584   Integrase_cat-core
IPR039537   Retrotran_Ty1/copia-like
IPR036397   RNaseH_sf
IPR025724   GAG-pre-integrase_dom
IPR036875   Znf_CCHC_sf
IPR001878   Znf_CCHC

SUPFAM

SSF53098 SSF53098 + More
SSF57756 SSF57756

Gene 3D

3.30.420.10

ProteinModelPortal

K7JC54 X1XSG1 A0A1Y1K3Q7

PDB

6EX9 E-value=0.00422161, Score=96

KEGG

105841853 no KO assigned | (RefSeq) uncharacterized LOC105841853

GO

GO:0000943 GO:0015074 GO:0003676 GO:0008270 GO:0006085 GO:0006101 GO:0003824 GO:0008152 GO:0016491 GO:0015930

PANTHER

PTHR11439

Length:

488

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

0.01049

Exp number, first 60 AAs:

0

Total prob of N-in:

0.00101

outside

1 - 488

Pi

429.495

Theta

234.454307

Tajima's D

2.718784

CLR

0

CSRT

0.96275186240688

Interpretation

Uncertain

Sequence

Summary

Ontologies

Topology

Population Genetic Test Statistics

Multiple alignment of Orthologues

Gene Tree