SGID Silkworm Genome Informatics Database
Gene
KWMTBOMO14546  Validated by peptides from experiments
Pre Gene Modal
BGIBMGA014403
Annotation
PREDICTED:_uncharacterized_protein_LOC106115633_isoform_X1_[Papilio_xuthus]
Location in the cell
Extracellular   Reliability : 1.858 PlasmaMembrane   Reliability : 1.893
 

Sequence

CDS
ATGGCGTTTTGCCGTTTACTGTTCCCGTTGCTAGTTCTAAGCGTGGCCAGTGCGTCGACGGTGCCAGTGTTCTTATGGGGCGACTTATCCAGTAGCTCTGGAAACTCCCTGAAATCGAACCCATTGAGCACGGTGTCCGCTCAAGGGTTCAGCGAAATTTTGAATAATGAGCTGAAAGACGACCCCTACGTGATAGTATTCCTTGAAGAAACCTTATCGGTCGAAGATTTTTCACGTAAAAATAACGAAGGTGATATTTCGATTCCGTACCTGTATGATAATTTAAGTGACGCTCTGTACTTGCCTTCCGTCGAAGATGCCTCAAGAGTACTCGAGGAGGTCGCCAAAGGAGCTGTTCATGTAAAACTCACCCAAAACGGACTCTCTGCAGCCATTGAAGATAAAAATAACAGGTTTATGTTCATCGCCTTGAAGGATGCTATGGAAGGCGAGTCACGTTACGACCTCCTCCGGCGCCATAGCAACTTTATGGAGGACCAGATATCTAAGCTGGAGAAGAAAGGTGATGTAATAGCTGTATACACTGCCCGAAACCCATCATGGACCATTCCGGACACCCACTCAAGGGTTCGTCGTCAAGCCAACTCTTCTGTAACCAACGGACCTGATTACTCATTAGACGGTCTGCGTTTGTACTTAACCGGCGTTACATTAGACCACAGCAATGCCAGCGTGACATTCACAAACTATGCAGGCGGCTCATCTGAATACAATACAACAACTGGAGTCTTGAACGGCACTTTAAACTTTGATCAGGGAAGCCTGACTCTTAACTTCCACAGGGCCGCAGGATATTGGTTCTTTGACACCGTGCACTTTGTCCAGACCAATCCGGCTGTTGACGAGATCCTCTATGCCACTGACGACTTGAATGCCCTGCTCGACTTTTCTTATCGTTGCAAACAGTCTGTCAGCTTCAAGAGTATCAACGAGACACAAGAGTACAAGGTGTCGTTTATCGATATAAAGGTGCAGCCGTTCTTTGGTCCAACAAACGCTTCGACTCCGTTTGGGGATTCCTTTAACTGCGTCGGATTCTTCTCTGCCCCCATCTGGTCCGGTCTGTTCGTTGTGTTCATATTGCTGTCCATAACCTTCTATGGCATCATGACCATGATGGACATTAAAACCATGGATAGGTTCGATGACCCGAAAGGCAAAACCATTACCATAAACGCAGGAGAGTAA
Protein
MAFCRLLFPLLVLSVASASTVPVFLWGDLSSSSGNSLKSNPLSTVSAQGFSEILNNELKDDPYVIVFLEETLSVEDFSRKNNEGDISIPYLYDNLSDALYLPSVEDASRVLEEVAKGAVHVKLTQNGLSAAIEDKNNRFMFIALKDAMEGESRYDLLRRHSNFMEDQISKLEKKGDVIAVYTARNPSWTIPDTHSRVRRQANSSVTNGPDYSLDGLRLYLTGVTLDHSNASVTFTNYAGGSSEYNTTTGVLNGTLNFDQGSLTLNFHRAAGYWFFDTVHFVQTNPAVDEILYATDDLNALLDFSYRCKQSVSFKSINETQEYKVSFIDIKVQPFFGPTNASTPFGDSFNCVGFFSAPIWSGLFVVFILLSITFYGIMTMMDIKTMDRFDDPKGKTITINAGE

Summary

EMBL
BABH01041376    AGBW02012775    OWR44472.1    GDQN01004728    JAT86326.1    KQ460130    + More
KPJ17529.1    NWSH01000512    PCG75932.1    ODYU01001279    SOQ37278.1    KQ459581    KPI99107.1    KZ150319    PZC71429.1    RSAL01000072    RVE49084.1    KQ459574    KPI99574.1    JTDY01000973    KOB75241.1    GALX01003018    JAB65448.1    KK852908    KDR13979.1    NEVH01007816    PNF35574.1    GEZM01006604    JAV95688.1    KQ971307    EFA11226.1    KK852669    KDR18876.1    PYGN01000704    PSN41978.1    GEBQ01002540    JAT37437.1    CH954177    EDV59397.1    NEVH01007825    PNF35171.1    PYGN01000418    PSN46733.1    KA645208    AFP59837.1    GFTR01006038    JAW10388.1    AAAB01008844    EAA06051.5    APCN01003080    CH940648    EDW61511.1    AE013599    BT003279    AAF58965.1    AAF58966.2    AAO25036.1    CM000071    EAL25632.1    KRT02422.1    DQ440094    CH477465    ABF18127.1    EAT40488.1    CM000157    EDW89477.1    CH479183    EDW36028.1    DS235797    EEB17209.1    CH933808    EDW09147.1    GEDC01012914    JAS24384.1    AXCN02000314    CH916367    EDW02201.1    GAPW01001945    JAC11653.1    JXUM01074646    KQ562843    KXJ75025.1    GFDG01001603    JAV17196.1    GFDG01001602    JAV17197.1    GFDG01001605    JAV17194.1    GFJQ02007651    JAV99318.1    ACPB03016232    AXCM01008102    CH902619    EDV36705.2    GFDG01001604    JAV17195.1    CP012524    ALC42044.1    KZ288199    PBC33632.1    CVRI01000043    CRK96156.1    GGFK01000888    MBW34209.1    GALA01001107    JAA93745.1    GAMC01003508    JAC03048.1    KQ767877    OAD53277.1    OUUW01000001    SPP72938.1    GGFJ01006145    MBW55286.1    GGFM01000656    MBW21407.1    GGFJ01006146    MBW55287.1    CM000362    CM002911    EDX06319.1    KMY92481.1    CH964154    EDW79783.1    KK854166    PTY12449.1    CH480816    EDW47074.1    GAMD01001017    JAB00574.1    GANO01004895    JAB54976.1    ATLV01011716    KE524713    KFB36113.1    GBXI01012345    JAD01947.1    GL436716    EFN71595.1    GDHF01002076    JAI50238.1    GAKP01016152    JAC42800.1    GDHF01026613    JAI25701.1    GDHF01024613    JAI27701.1    LJIG01016297    KRT81025.1    ADMH02002112    ETN58856.1    KQ434803    KZC05906.1    AK341770    BAH72074.1    GBYB01013953    JAG83720.1    JH431566   
Pfam
PF05827   ATP-synt_S1
Interpro
IPR008388   ATPase_V1-cplx_s1su       

Ontologies

Topology

SignalP
Position:   1 - 18,         Likelihood:  0.976165
 
 
Length:
402
Number of predicted TMHs:
1
Exp number of AAs in TMHs:
35.61112
Exp number, first 60 AAs:
13.36283
Total prob of N-in:
0.61439
POSSIBLE N-term signal
sequence
outside
1  -  354
TMhelix
355  -  377
inside
378  -  402
 
 

Population Genetic Test Statistics

Pi
25.969204
Theta
184.223016
Tajima's D
0.870062
CLR
0.254657
CSRT
0.624668766561672
Interpretation
Uncertain
Peptides ×
Source Sequence Identity Evalue
26822097 HSNFMEDQISK 100.00 0.003
26280517 NPQATDIFGQADAVVK 100.00 0.003
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