SGID Silkworm Genome Informatics Database
Gene
KWMTBOMO14545  Validated by peptides from experiments
Pre Gene Modal
BGIBMGA014407
Annotation
clip_domain_serine_protease_11_precursor_[Bombyx_mori]
Location in the cell
Cytoplasmic   Reliability : 1.754 Mitochondrial   Reliability : 1.299
 

Sequence

CDS
ATGGACTCTCCCGCTGCCAAGACCAAGTGCCTCGCCACCGGCTGGGGCAAGGACAAGTTCGGGAAGGAAGGGAGACACCGGGGCATCATGAAAAAGATCGAGGTGCCGGTTGTCGAGAACCAGGTGTGCCAGCGCGAGCTCCGCAAGACGCGGCTCGGGAGGCTGTTCCAGCTCCACGAGTCGTTCATGTGCGCGGGGGGGCAGCGCGGCCGCGACCCCTGCACCGGGGACGGGGGGTCGCCGCTCGTGTGCCCCATACCGAACCAAACGAACCGGTACTGGCAGTCCGGGATCGTGTCCTGGGGCATCGGCTGCGGGGAGCAGGGCACCCCGGGCGTGTACGTGGACGTCAGCAAGATCCGCGCGTGGATCGACGAGAAGGTCGCCGAAAACGGATTCGACACGAAAGCTTACCAACCTAAGATTTGA
Protein
MDSPAAKTKCLATGWGKDKFGKEGRHRGIMKKIEVPVVENQVCQRELRKTRLGRLFQLHESFMCAGGQRGRDPCTGDGGSPLVCPIPNQTNRYWQSGIVSWGIGCGEQGTPGVYVDVSKIRAWIDEKVAENGFDTKAYQPKI

Summary

Similarity
Belongs to the peptidase S1 family.
EMBL
BABH01041370    BABH01041371    BABH01041372    BABH01041373    BABH01041374    GAIX01004065    + More
JAA88495.1    BABH01041359    BABH01041360    BABH01041361    BABH01041362    AF513368    AB436165    AAN77090.1    BAG70412.1    ODYU01001279    SOQ37277.1    AK401279    BAM17901.1    KQ459805    KPJ19884.1    EU770391    ACI32835.1    KZ150319    PZC71430.1    AK402486    BAM19108.1    NWSH01000512    PCG75933.1    FJ882067    ACZ68116.1    JTDY01006997    KOB65538.1    KQ459348    KPJ01304.1    AGBW02009431    OWR50839.1    AY829844    AAV91458.1    AY672800    AAV91027.1    RSAL01000281    RVE43040.1    GQ222378    ACS92763.1    GAKP01011334    JAC47618.1    APGK01030057    KB740754    ENN79053.1    CH933807    EDW13537.1    KRG03846.1    KB632375    ERL93883.1    GL435781    EFN72618.1    AJ278310    CAB93496.1    AXCN02001109    BT127757    AEE62719.1    MH261257    AYA71582.1    AXCM01000677    GDHF01026236    GDHF01017251    GDHF01011785    JAI26078.1    JAI35063.1    JAI40529.1    GDHF01002678    JAI49636.1    KPJ01302.1    GDHC01019752    JAP98876.1    AAAB01008986    EAA00751.3    KQ971314    EEZ99181.1    KK107293    EZA53191.1    KQ435753    KOX76091.1    CM000157    EDW88785.1    GBXI01016415    JAC97876.1    GDHF01032741    JAI19573.1    KQ982231    KYQ58865.1    CVRI01000070    CRL07164.1    JN215469    AEX33291.1    GDHF01017671    GDHF01015071    GDHF01004544    JAI34643.1    JAI37243.1    JAI47770.1    GBYB01012771    JAG82538.1    GAMC01007476    JAB99079.1    GAMC01007477    JAB99078.1    GANO01004575    JAB55296.1    APCN01002396    KX346577    ASN76824.1    FX985353    BAX07366.1    CH916372    EDV99444.1    GBYB01009641    JAG79408.1    FX985366    BAX07379.1    FX985352    BAX07365.1    EZ422064    ADD18272.1    ATLV01023873    KE525347    KFB49751.1    GGFM01002049    MBW22800.1    GGFJ01005513    MBW54654.1    CH964265    EDW83475.2    GGFM01006058    MBW26809.1    GGFJ01005514    MBW54655.1    KA644677    AFP59306.1    GAMD01001182    JAB00409.1    GGFJ01005503    MBW54644.1    GGFJ01005512    MBW54653.1    APCN01002398    EAA00410.4    KQ979039    KYN23318.1    GGFK01002694    MBW36015.1    AXCN02001108    KJ512107    AID60330.1    GGFK01004821    MBW38142.1    APCN01002395    GGFK01004811    MBW38132.1    GGFK01005205    MBW38526.1    GGFM01001974    MBW22725.1   
Pfam
PF00089   Trypsin        + More
PF18322   CLIP_1
Interpro
IPR009003   Peptidase_S1_PA        + More
IPR001314   Peptidase_S1A       
IPR001254   Trypsin_dom       
IPR041515   PPAF-2_Clip       
IPR018114   TRYPSIN_HIS       
SUPFAM
SSF50494   SSF50494       
PDB
2B9L     E-value=3.98453e-40,     Score=407

Ontologies

Topology

Length:
142
Number of predicted TMHs:
0
Exp number of AAs in TMHs:
0.01134
Exp number, first 60 AAs:
0
Total prob of N-in:
0.41393
outside
1  -  142
 
 

Population Genetic Test Statistics

Pi
149.50505
Theta
116.965964
Tajima's D
0.899738
CLR
0.384648
CSRT
0.631718414079296
Interpretation
Uncertain

Multiple alignment of Orthologues

 
 

Gene Tree

 
 
Peptides ×
Source Sequence Identity Evalue
28467696 KIETNPEIAR 100.00 0.003
29197581 IFQIHESFMCAGGQR 100.00 0.003
28467696 IEVPVEQVIEEK 100.00 0.004
29197581 FPDDPESQK 100.00 0.004
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