SGID Silkworm Genome Informatics Database
Gene
KWMTBOMO14540
Pre Gene Modal
BGIBMGA014546
Annotation
hypothetical_protein_KGM_14113_[Danaus_plexippus]
Location in the cell
Cytoplasmic   Reliability : 1.956 Nuclear   Reliability : 2.532
 

Sequence

CDS
ATGAATCCCAAAAAGGTTCCGCACGCTAAGGACGATCCCTTGGAAGCGACCAAAGCTAACGACGAGACGTGGCCAACATTCGACTTCTCCAAATTCGAGTCGTATCTCAACAACGACGGCGACCAAGGCAGCAACAGAATAAAACGCAAAGCTAAGAACACCCGGCGTTTCGACACTGTCAGCGGCCCGAAGCTCCGCGAGCGACCCCACCACTATCTCTACCCGGAACCGGTCAAAGACAGGATCCTCGAGTTCACGACCACCACAAAGAAACCGGGTATCCTGCCGGACCAGATGAATCCAGGCGTCATATTCAGGGTGCGAATGTCCGACGCCATTCTGCGGATCAAACAGCGAATGTACGAGGACCCGGAGAGGCATATAGAAGCGGACATCATATACACGAACCTGATAAAGAAGATCGTCATGGACGAGATTACCAAGTTCCACAATCTACTGCTCATGTACAAAACCGACAGAAGCATCAAGGAGCATTTAGGGGAGTGTGGCGGTAGGATTTACAAATTCATAAGCTACATGACGATCAAAGTTCATATCTATTGCCTCTTCGATGCTCTGTGGATAGACGGCAACCCTTACGTGATCGGAGATGAGTATACCGTAACGCCGGTCGAGGTGCCTCCGATGCTGCAATGCGACGCGGCTGAATGTAACTCTGTCGTTTTCGTGGATTCGATCACTGAACCTAGAGACCTTGAGGAGTAA
Protein
MNPKKVPHAKDDPLEATKANDETWPTFDFSKFESYLNNDGDQGSNRIKRKAKNTRRFDTVSGPKLRERPHHYLYPEPVKDRILEFTTTTKKPGILPDQMNPGVIFRVRMSDAILRIKQRMYEDPERHIEADIIYTNLIKKIVMDEITKFHNLLLMYKTDRSIKEHLGECGGRIYKFISYMTIKVHIYCLFDALWIDGNPYVIGDEYTVTPVEVPPMLQCDAAECNSVVFVDSITEPRDLEE

Summary

Pfam
PF00096   zf-C2H2
Interpro
IPR013087   Znf_C2H2_type        + More
IPR036236   Znf_C2H2_sf       
SUPFAM
SSF57667   SSF57667       

Ontologies

Topology

Length:
241
Number of predicted TMHs:
0
Exp number of AAs in TMHs:
0.41722
Exp number, first 60 AAs:
0
Total prob of N-in:
0.13047
outside
1  -  241
 
 

Population Genetic Test Statistics

Pi
314.202124
Theta
184.176919
Tajima's D
2.667215
CLR
0.000992
CSRT
0.95925203739813
Interpretation
Uncertain
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