SGID Silkworm Genome Informatics Database
Gene
KWMTBOMO14534
Pre Gene Modal
BGIBMGA014444
Annotation
PREDICTED:_uncharacterized_protein_LOC101744966?_partial_[Bombyx_mori]
Location in the cell
Nuclear   Reliability : 3.062
 

Sequence

CDS
ATGCACTGGGCCTCATATCCTTTAGGCCACAACGACTTCAGGTCCGAACGCTTTTGCGACGTGACCTTGTACTGTTCTCCGAATTTCGCGACCCAAGTGACTGGCAAGGACACGGTGGAGCCACAGAACATCCGAGGAGTCTCACTTCGGGCGCACAGGGTTGTTCTGGCGGCGTGCTCGGAGTTGCTGGGGGCGCTGCTGGGCGCTCACGAGGCTCACGGGGAACCTGTCCTGGTCATCGACGGTGCTGAACCGAAACACCTGAAGGCTCTCCTCGATTATATGTACACCGGCGAAATGAACGTTCATCATTCGCAGCTCGCGAGTCTCCTGAAGACAGCCGAGGAGCTCCGCATCAAGGGCCTGACGGATTTACGGTGGAATAACAAGGACGAACCGCCAGACTCTGAAACTGGAGTCGTGGCCACGCCCACTAGCTCGCCCGTCGAGAAACAAACAGACAAACTCACCGAAAAACAAGAGAAGACGCCGTCCCCACTACCGATACTACCGAAACTAGAAACGTCCAAGCAAATTTCCCCAAAGCCCGAGACGCCAAAGTTGAATTCCCCCAAACAGGTCTCCCCGAAGATAAGTTCCCCCAAACAGGTCTCCCCCAAGCAAGTCTCCCCCAAACAAGTCTCCCCGAAACTAGGGTCCCCTAGAGGGGGCTCGTCGAGTCAGGAAGCGCCCCGGACCCCGGAGGCCGCAGACTTTCGCTCGTTGAAGACCGAAAGCGAAGTCGGCGACGACAAGGCTCTTGATAAATTCAATGTCAACGGTGGTCCTCCGCCCTTAATAAAACTGACGACTAAAGAAAGAATCAGTCCAATCAAGCGAGAGAACTCTGAAATAGACAGTCCGAGCCCCAAGCGACAGAGGCTGGCGAGCGCCACCGAGCACATGGACGAAGACTCCATGTCTGCATCAAGAGGAGACAAAGACGAATGGCAACACGGGAATCTAGTAAGTCGATGA
Protein
MHWASYPLGHNDFRSERFCDVTLYCSPNFATQVTGKDTVEPQNIRGVSLRAHRVVLAACSELLGALLGAHEAHGEPVLVIDGAEPKHLKALLDYMYTGEMNVHHSQLASLLKTAEELRIKGLTDLRWNNKDEPPDSETGVVATPTSSPVEKQTDKLTEKQEKTPSPLPILPKLETSKQISPKPETPKLNSPKQVSPKISSPKQVSPKQVSPKQVSPKLGSPRGGSSSQEAPRTPEAADFRSLKTESEVGDDKALDKFNVNGGPPPLIKLTTKERISPIKRENSEIDSPSPKRQRLASATEHMDEDSMSASRGDKDEWQHGNLVSR

Summary

Pfam
PF00651   BTB
Interpro
IPR011333   SKP1/BTB/POZ_sf        + More
IPR000210   BTB/POZ_dom       
IPR009057   Homeobox-like_sf       
IPR013087   Znf_C2H2_type       
IPR036236   Znf_C2H2_sf       
SUPFAM
SSF54695   SSF54695        + More
SSF46689   SSF46689       
SSF57667   SSF57667       
PDB
4HXI     E-value=0.00505172,     Score=93

Ontologies

Topology

Length:
325
Number of predicted TMHs:
0
Exp number of AAs in TMHs:
0.00917
Exp number, first 60 AAs:
0.00404
Total prob of N-in:
0.00870
outside
1  -  325
 
 

Population Genetic Test Statistics

Pi
194.445961
Theta
139.036311
Tajima's D
2.135467
CLR
0.045545
CSRT
0.903554822258887
Interpretation
Uncertain
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