Gene

KWMTBOMO14520

Pre Gene Modal

BGIBMGA014382

Annotation

PREDICTED:_uncharacterized_protein_LOC105387121_[Plutella_xylostella]

Location

Bomo_Chr24(-):9273817-9278205      View in EpiBrowser

Location in the cell

Cytoplasmic   Reliability : 1.326 Mitochondrial   Reliability : 1.791 Nuclear   Reliability : 1.249

CDS

ATGGCCTCATTACCAAAATGTCGTTTAGAGTCCGATATTTATCCCTTCCAACATACTGTCGGTGTTGATATAGGAGACGAATATCATTATAATTTGATCGTCGCAAAGCTTAGTAGAGATAATGTGGAACAGATCAGTGATTTAGGCCTGACACGCCCAGACTCCCAGAAATACGAGGCATTGAAGACCAGATTGCTTGCCGTTTACGAGGAATCCGAGGTTCGGCAAGTACCAAAATTCCTGAATGAAATGGAACTGGGTGATCAAAAGCCACCCCAGCTTCTACGAAGAATGAAGGTTCTTGCCAGAAATAAATTCGCGGAAGAAACTCTTCGCATGCTGTGGATGGGACATTTACCCGTCGGCAATACAGTTATCCGTCAGTGA

Protein

MASLPKCRLESDIYPFQHTVGVDIGDEYHYNLIVAKLSRDNVEQISDLGLTRPDSQKYEALKTRLLAVYEESEVRQVPKFLNEMELGDQKPPQLLRRMKVLARNKFAEETLRMLWMGHLPVGNTVIRQ

Uniprot

H9JXW4   A0A2A4JQB6   A0A2A4JNQ1   H9J4N2   H9JCU7   A0A2H1WB17   + More
A0A2H1V5N9   A0A0L7LSS0   A0A0L7KZ22   A0A0L7LKK8   A0A2A4JI65   A0A0L7LQI4   A0A1E1WLV2   A0A2A4JUK3   A0A2W1BAJ4   A0A0L7LG32   A0A0L7L5A2   A0A0L7LFW5   A0A2W1BA89   A0A0L7KTE7   A0A0L7KS03   A0A0J7K6V1   A0A151IIJ9   A0A1Y1MA44   A0A0A9Y7A4   A0A087TXF8   A0A026VRX8   A0A2L2YSA7   T1IE85   A0A1Y1MVP9   A0A151I8D5   A0A139W8G7   A0A139WA14   A0A0A9Z2L8   X1X8P9   K7K066   K7JBC2   A0A139WPP8   E2BRX8   A0A139WPG8   A0A0L7LFF1   A0A1I8Q981   X1WYV7   D7GYF3   D7EJX5   A0A2A4J536   A0A0A9YNN7   A0A0A9ZC79   K7JBB9   K7JBC0   K7JVT0   A0A0P8Y298   A0A0P8Y4V5   D6WTN9   T1IE13   T1I831   A0A034V7S3   A0A154PT26   A0A151JR52   A0A0P8ZL89   A0A0A9X9N4   T1HGU2   A0A139W9J0   A0A151ITG2   A0A151IZ47   A0A2M4AQA2   A0A2M4AQR5   A0A2M4ARB7   A0A2M4AYW0   A0A2M4AYL6   A0A1S4EQ14   A0A151J3D2   A0A2R7W7C8   E2BBH0   K7JBZ8   K7JX19   A0A0A9ZFJ2   A0A151JX20   A0A0P8Y533   A0A0K8SFH9   A0A151K218   A0A3Q0JNT2   A0A2M4AUN5   X1WIV3   A0A0L7QK36   A0A2M4ATJ7   A0A0L7R2Y5   A0A0J7K6I6   A0A1I8Q298   A0A151JF00   A0A151JCH0   A0A2A4J8M7   A0A0J7K0A7  

Pubmed

19121390    26227816    28756777    28004739    25401762    24508170    + More
26561354    18362917    19820115    20075255    20798317    17994087    25348373   

EMBL

BABH01040601    NWSH01000903    PCG73612.1    PCG73611.1    BABH01022003    BABH01027731    + More
BABH01027732    ODYU01007352    SOQ50042.1    ODYU01000815    SOQ36165.1    JTDY01000162    KOB78510.1    JTDY01004351    KOB68269.1    JTDY01000727    KOB76088.1    NWSH01001424    PCG71274.1    JTDY01000325    KOB77690.1    GDQN01003070    JAT87984.1    NWSH01000589    PCG75479.1    KZ150191    PZC72412.1    JTDY01001264    KOB74344.1    JTDY01002934    KOB70464.1    JTDY01001300    KOB74269.1    KZ150227    PZC72038.1    JTDY01006055    KOB66331.1    JTDY01006677    KOB65789.1    LBMM01012923    LBMM01012917    KMQ85926.1    KMQ85930.1    KQ977516    KYN02153.1    GEZM01036621    JAV82564.1    GBHO01016636    JAG26968.1    KK117196    KFM69797.1    KK111495    EZA46390.1    IAAA01053498    IAAA01053499    LAA11042.1    ACPB03034542    GEZM01019580    GEZM01019578    JAV89619.1    KQ978367    KYM94586.1    KQ973343    KXZ75568.1    KQ971745    KYB24749.1    GBHO01005513    JAG38091.1    ABLF02062577    AAZX01005161    AAZX01000249    KQ971307    KYB29887.1    GL450083    EFN81554.1    KYB29888.1    KOB74268.1    ABLF02062578    GG695519    EFA13383.1    KQ971759    EFA12902.2    NWSH01003151    PCG66856.1    GBHO01008962    JAG34642.1    GBHO01004189    JAG39415.1    AAZX01023342    AAZX01004730    AAZX01008012    CH902689    KPU72637.1    CH902694    KPU81747.1    KQ971355    EFA07205.2    ACPB03037918    ACPB03012735    GAKP01020775    JAC38177.1    KQ435204    KZC15052.1    KQ978645    KYN29457.1    CH902629    KPU75574.1    GBHO01027248    JAG16356.1    ACPB03011651    KQ972226    KYB24577.1    KQ981018    KYN10257.1    KQ980726    KYN14011.1    GGFK01009622    MBW42943.1    GGFK01009800    MBW43121.1    GGFK01010016    MBW43337.1    GGFK01012457    MBW45778.1    GGFK01012556    MBW45877.1    KQ980296    KYN16851.1    KK854387    PTY15358.1    GL447057    EFN86960.1    AAZX01023221    GBHO01000305    JAG43299.1    KQ981607    KYN39392.1    CH905996    KPU81830.1    GBRD01013927    JAG51899.1    LKEX01010536    KYN50169.1    GGFK01011186    MBW44507.1    ABLF02032144    KQ414987    KOC58988.1    GGFK01010782    MBW44103.1    KQ414663    KOC65240.1    LBMM01013103    KMQ85816.1    KQ979024    KYN24351.1    KQ979048    KYN23218.1    NWSH01002598    PCG67884.1    LBMM01018089    KMQ83878.1   

Proteomes

UP000005204    UP000218220    UP000037510    UP000036403    UP000078542    UP000054359    + More
UP000053097    UP000015103    UP000007266    UP000007819    UP000002358    UP000008237    UP000095300    UP000007801    UP000076502    UP000078492    UP000079169    UP000078541    UP000053825   

PRIDE

H9JXW4    H9J4N2    H9JCU7   

Pfam

PF01490   Aa_trans        + More
PF10551   MULE
PF00078   RVT_1
PF17921   Integrase_H2C2
PF00665   rve
PF17917   RT_RNaseH
PF17919   RT_RNaseH_2
PF00077   RVP
PF14529   Exo_endo_phos_2

Interpro

IPR013057   AA_transpt_TM        + More
IPR021109   Peptidase_aspartic_dom_sf       
IPR018289   MULE_transposase_dom       
IPR000477   RT_dom       
IPR041588   Integrase_H2C2       
IPR001969   Aspartic_peptidase_AS       
IPR001995   Peptidase_A2_cat       
IPR034132   RP_Saci-like       
IPR012337   RNaseH-like_sf       
IPR001584   Integrase_cat-core       
IPR036397   RNaseH_sf       
IPR041373   RT_RNaseH       
IPR041577   RT_RNaseH_2       
IPR018061   Retropepsins       
IPR036691   Endo/exonu/phosph_ase_sf       
IPR005135   Endo/exonuclease/phosphatase       

SUPFAM

SSF50630   SSF50630        + More
SSF53098   SSF53098       
SSF56219   SSF56219       

Gene 3D

2.40.70.10     3.30.420.10     3.60.10.10    

CDD

cd06094  RP_Saci_like

ProteinModelPortal

H9JXW4   A0A2A4JQB6   A0A2A4JNQ1   H9J4N2   H9JCU7   A0A2H1WB17   + More
A0A2H1V5N9   A0A0L7LSS0   A0A0L7KZ22   A0A0L7LKK8   A0A2A4JI65   A0A0L7LQI4   A0A1E1WLV2   A0A2A4JUK3   A0A2W1BAJ4   A0A0L7LG32   A0A0L7L5A2   A0A0L7LFW5   A0A2W1BA89   A0A0L7KTE7   A0A0L7KS03   A0A0J7K6V1   A0A151IIJ9   A0A1Y1MA44   A0A0A9Y7A4   A0A087TXF8   A0A026VRX8   A0A2L2YSA7   T1IE85   A0A1Y1MVP9   A0A151I8D5   A0A139W8G7   A0A139WA14   A0A0A9Z2L8   X1X8P9   K7K066   K7JBC2   A0A139WPP8   E2BRX8   A0A139WPG8   A0A0L7LFF1   A0A1I8Q981   X1WYV7   D7GYF3   D7EJX5   A0A2A4J536   A0A0A9YNN7   A0A0A9ZC79   K7JBB9   K7JBC0   K7JVT0   A0A0P8Y298   A0A0P8Y4V5   D6WTN9   T1IE13   T1I831   A0A034V7S3   A0A154PT26   A0A151JR52   A0A0P8ZL89   A0A0A9X9N4   T1HGU2   A0A139W9J0   A0A151ITG2   A0A151IZ47   A0A2M4AQA2   A0A2M4AQR5   A0A2M4ARB7   A0A2M4AYW0   A0A2M4AYL6   A0A1S4EQ14   A0A151J3D2   A0A2R7W7C8   E2BBH0   K7JBZ8   K7JX19   A0A0A9ZFJ2   A0A151JX20   A0A0P8Y533   A0A0K8SFH9   A0A151K218   A0A3Q0JNT2   A0A2M4AUN5   X1WIV3   A0A0L7QK36   A0A2M4ATJ7   A0A0L7R2Y5   A0A0J7K6I6   A0A1I8Q298   A0A151JF00   A0A151JCH0   A0A2A4J8M7   A0A0J7K0A7  

KEGG

NA   

GO

GO:0016021   GO:0005634   GO:0004190   GO:0005524   GO:0003676   GO:0015074  

Length:

128

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

0.00365

Exp number, first 60 AAs:

0.00041

Total prob of N-in:

0.14467

outside

1  -  128

 

 

Pi

227.339448

Theta

198.271454

Tajima's D

1.130836

CLR

24.877164

CSRT

0.702114894255287

Interpretation

Uncertain