Silkworm Genome Informatics Database

Gene

KWMTBOMO14515

Pre Gene Modal

BGIBMGA014383

Annotation

Uncharacterized_protein_OBRU01_10026_[Operophtera_brumata]

Location

Bomo_Chr24(-):9111231-9114763 View in EpiBrowser

Location in the cell

Cytoplasmic Reliability : 1.551 Mitochondrial Reliability : 1.211 Nuclear Reliability : 1.531

CDS

ATGGAAAAAAGTGATACTGAAGACGATAATCTTATCACGACGAAAGAAAGAAGAGCATATAAGCAGCAAGCATTAACAAAGTTATTGACGAAAATCTCAGCCACCGACTTCGCTGCAGCTTCCAAAGCTTCTTTAGCAGTCTTGGAGTCAAGACTTATTTCGATCTATGCTGAATTTGAAACCCTTTGTCAAGAAGCGTTCGCATTGGGAGATAAGTCAACGAGCAAAGCTGATGAATTTGAAGAAAGGTATATCAATGCTCTAACGCTACTGAAAGAGAACTTAAGCCACTCATCAAGCCATAATCAATCCGAACAAAAAATTAAATTACCAGTGATTCAAATTCCACTATTCAATGGTAAGTCAAGTGATTATAAAACTTTTATAGGATTGTTCGAATCTTTAATAGATAAAGACAGGTCATTAGATGACATAAAAAAATTATATTATCTCCGTAATTTTGTGACTAACGACCCTTATGATCTCATCAAAAACTTGCCATTGGTTGGTGAAAGTTACCATGAATCACTCAAAATTGGCTGCCCCGCTAAACTAACCACGGATCAAGGCAGACAATTTGAAAGTAATGTTTTTAAGGAACTAATGAAGTGTCTAGGTATTGTCAAGACACGCACTACTCCCTATCACCCGCAATGCAACGGGTTAGTGGAAAGATGGTACCGTTCACTCAAGGCAGCGTACATGGCCCGACTAGATTCTAAGGCGTGGGTTGAAGAATTACCTATTGTTTTGCTAGGACTTCGTGCAGCACCGCGGACCGACTCAGGCGTCAGTGCCGCCGAAATGACCTACAGGCAAACATTGCGTTTAGCGGGAGATTTTTATAATGATAGTATTATACCTATATTAGATCATTGTCAATACGTAAAGCATTTGCGCGCTATGATATATAATTTGAAACCTAAACCGCTACCGCAGCTCGATAATCAGGAGTTTCAACTAAGATTTCGGCTCGACAAGCAGTCTGTGCAATTACTGTTAGGTGAAATTTATCCTTTTTTAAAGGCAAAAGGAACCAGGAATCATGGAATATCTCCCTTACATCAACTGCTATTAACTTTAAGGTTCTATGCCTTAGGAACTATGCTACTATCAGTAGCAGACTTTATAGGTGTTTCGAAAGCATCAGCATGTCGTACTGTTCGCGACGTCAGTAATGCTATAGCACAGCTATATAGCAAGTACATCTACATGCATTCCGATACCGAACAAGACTTTTATGCTGTTTCAAGATTCCCAGGTGTCCTTGGTGCACTTGATGGTACACACATTAGGATTCAGTCACCATGTAAACACGGGGCCAACAGCTTTATAATGAAGCCCATATTCGAACAAGAAACTGCATTGAAAGATGTTTTGGTGTTGAAACGAAGATTCCCTGTTGTAGCCTTAAAATTGCGCCTGAGCCTTCTAAGAGCCAATGCAGTGATTATAGCTACAGCTGTACTCCACAACATTTGTCGACTGAAGAAGCTTGATGATATATCACCAGAAGTAGAAATTCCTGAGGCAGGCCTACAGAAAGTAGCACTGAGGAAACTTTTAGTACAGAAAGAGCTAATTTGA

Protein

MEKSDTEDDNLITTKERRAYKQQALTKLLTKISATDFAAASKASLAVLESRLISIYAEFETLCQEAFALGDKSTSKADEFEERYINALTLLKENLSHSSSHNQSEQKIKLPVIQIPLFNGKSSDYKTFIGLFESLIDKDRSLDDIKKLYYLRNFVTNDPYDLIKNLPLVGESYHESLKIGCPAKLTTDQGRQFESNVFKELMKCLGIVKTRTTPYHPQCNGLVERWYRSLKAAYMARLDSKAWVEELPIVLLGLRAAPRTDSGVSAAEMTYRQTLRLAGDFYNDSIIPILDHCQYVKHLRAMIYNLKPKPLPQLDNQEFQLRFRLDKQSVQLLLGEIYPFLKAKGTRNHGISPLHQLLLTLRFYALGTMLLSVADFIGVSKASACRTVRDVSNAIAQLYSKYIYMHSDTEQDFYAVSRFPGVLGALDGTHIRIQSPCKHGANSFIMKPIFEQETALKDVLVLKRRFPVVALKLRLSLLRANAVIIATAVLHNICRLKKLDDISPEVEIPEAGLQKVALRKLLVQKELI

Uniprot

NA

ProteinModelPortal

NA

PDB

3S3O E-value=6.39958e-06, Score=120

KEGG

101742499 K23222 nuclease HARBI1 [EC:3.1.-.-] | (RefSeq) uncharacterized LOC101742499

GO

GO:0015074 GO:0003676 GO:0005524 GO:0008026 GO:0005634 GO:0005507 GO:0004713 GO:0016491 GO:0015930

Length:

528

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

4.81490000000001

Exp number, first 60 AAs:

0.01938

Total prob of N-in:

0.01192

outside

1 - 528

Pi

231.592644

Theta

193.775867

Tajima's D

0.539735

CLR

38.273833

CSRT

0.521573921303935

Interpretation

Uncertain

Sequence

Summary

Ontologies

Topology

Population Genetic Test Statistics