SGID Silkworm Genome Informatics Database
Gene
KWMTBOMO14513
Annotation
PREDICTED:_uncharacterized_protein_LOC105842783?_partial_[Bombyx_mori]
Location in the cell
Nuclear   Reliability : 4.059
 

Sequence

CDS
ATGTCTCATAGAGATAATAGAAGGCAGTCCTATAATTACGAGCAAGGAAACCAACGCCACTACCAACAGACTCAAAAAGAAGCATGGGTGGCCCTTACGGCTGCCTACAATGCCAAGTGTGGCTCCTTCCCCAAGCAGAAGGAACAGCTCAAATTAAAATGGGACAATTTGAAAAAGATGGCCCGAAAGAGAGCACAAAAAGTACGAATGAATAGTCTAAAGACTGGTGGTGGAAAACCTGACTTCATCCCACCAGATGAATTGTTAGAAAAAGTAACATCTCTTTTGGGGTCGACCTGCACTGGGTTCGATGTCCCTTTTGGTGGTGACGGATTAGGCGTTGGTATGGTGCTGGAATTGGAAGTCGGTGGGCTTGAACTTCAGAACCAGTCGGATCATTGTGAACCCGAAACTGAAGGGAATGTGGTTCTGTGTCCAAGTCCAAAAAGAGACAATAAAACAAAGCACCATAGCATGTCTAAATGCTTGCAAACCAAAGCAAGGAAGAAAAAAGACGCAAGAGATGATGGGCGCCTTGAACTAAATCTTGCTATGGCCAAATATTATGAGAAGGCTGAAAAATTAGATTTAGAAATTCAGCTGTTAAAGAAAGAAATTTCAGACAAAGATAACAATAGTGCTTAA
Protein
MSHRDNRRQSYNYEQGNQRHYQQTQKEAWVALTAAYNAKCGSFPKQKEQLKLKWDNLKKMARKRAQKVRMNSLKTGGGKPDFIPPDELLEKVTSLLGSTCTGFDVPFGGDGLGVGMVLELEVGGLELQNQSDHCEPETEGNVVLCPSPKRDNKTKHHSMSKCLQTKARKKKDARDDGRLELNLAMAKYYEKAEKLDLEIQLLKKEISDKDNNSA

Summary

Pfam
PF13873   Myb_DNA-bind_5
Interpro
IPR028002   Myb_DNA-bind_5        + More
IPR026753   NAIF1       
IPR017877   Myb-like_dom       

Ontologies

Topology

Length:
214
Number of predicted TMHs:
0
Exp number of AAs in TMHs:
0.00798
Exp number, first 60 AAs:
0.00178
Total prob of N-in:
0.42897
outside
1  -  214
 
 

Population Genetic Test Statistics

Pi
332.089562
Theta
227.550096
Tajima's D
1.173086
CLR
0.07017
CSRT
0.705264736763162
Interpretation
Uncertain
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