Silkworm Genome Informatics Database

Gene

KWMTBOMO14502

Pre Gene Modal

BGIBMGA008526

Annotation

PREDICTED:_uncharacterized_protein_LOC105841662_[Bombyx_mori]

Location

Bomo_Chr24(-):8499589-8501088 View in EpiBrowser

Location in the cell

Nuclear Reliability : 3.54

CDS

ATGGACCTGTATAGAAAGCAGCAGCAGTACTATGCTGACACACCGAGCGACCAATTACTCCAGGAAGTGATGAAGACGTTTGAGGATATACCCTCAAAGGTTCAGCAGTACCCTCAGATGAGGCGGGACATCAAGTCCTTCCTGGAGTCACAATCGGACAAAAGTATCCGCATACTCTTTGAGTTGAGTAAGCGGATGAAGTGTCTGGAAGCAGCGGCGTCCGGGACTAGCATACATACAGTAGCGTCATCTTCTAACAAAGAAGAAAAACTGCTGGGAAAATTGCAAGAGGTGGAAAACACACTAACTTCACGGCTTAGTCAAATGGAAGTTAACCTGAAGCATGAAATATCAGAACTTAATATAGGAAACGACGATCGAGGCGCTGACATCCTCGAACATATGTTCAAAAATTTCGAAGAGACCAAAGCCGAAATAGTTAAATCGACCGAAGGTGTCGTGGGACGGACGCAGGCTCTCTTTGAAGATCTGGCTGGTACTGTCGCCAGAGACGTCGTCGAAGCCAAAACACAAATAAGCCAGATAACAAAAGGGTTGACAGCTGAGAGCAACATGGTTCCCCAAACATATGCCAGCGCCGCAGCAACAAAACCTGGGCGTCGTCCGGCGCTTCACTCGATGGCGGTGACCTTCGAGGACAATCAAGAGACTGCCGAAGAGGTACTCGCGAGAGTGAGGAAAGCGGTCGACGCCAGGGGTACTGGCCTTAAAATAAATAAAATAAGGAAGGCAAAGAATAGCACAGTCATACTCGGCTGCGATACGGAAGTGGAACTAGATAAGGTGAGAGAAAGGATAAAAAGCCACGGTGATGGGTTAATCGTAGCGCCCATGAAGAATAAGGACCCACTCGTCGTCCTTAAAGACGTCTTTATGGACAATGACGACAACGAAATGGTTAAGGCCCTTTACGCTCAAAACGCCGACATCTTCATGGGTCTATCACAAGAGGAGATGGATTTGACAATTAAATTTAAAAAGAGGACCAGAAATCCTAAGACCTCTCACGTTGTCATCCAGGTGAGACCGAAGGTATGGCAGAGGATGACGGAGGCTGGCGCCCTCTATCTGGACCTGCAAAGGGTCAGAGTGGAGGACCAGTCTCCGCTCATCCAATGCACGAAGTGCCTCGCCTTCGGCCACGGCCGCAAATTCTGCACCGGGAATGTAGACAAGTGTAGCCACTGCGGAGGCCCACACTTGCGCGAGGAATGCGCCGACTACATCGCGGGAATTAAACCGCAGTGCTGCAATTGCTTGCACTCCAGGTTGCAGAGTACGGATCACAACGCATTCAGTGTCGATTGCCCAACCCGCAAAAAGTGGGACTACCTGGCGCGATCAAACACTGCATATATATGA

Protein

MDLYRKQQQYYADTPSDQLLQEVMKTFEDIPSKVQQYPQMRRDIKSFLESQSDKSIRILFELSKRMKCLEAAASGTSIHTVASSSNKEEKLLGKLQEVENTLTSRLSQMEVNLKHEISELNIGNDDRGADILEHMFKNFEETKAEIVKSTEGVVGRTQALFEDLAGTVARDVVEAKTQISQITKGLTAESNMVPQTYASAAATKPGRRPALHSMAVTFEDNQETAEEVLARVRKAVDARGTGLKINKIRKAKNSTVILGCDTEVELDKVRERIKSHGDGLIVAPMKNKDPLVVLKDVFMDNDDNEMVKALYAQNADIFMGLSQEEMDLTIKFKKRTRNPKTSHVVIQVRPKVWQRMTEAGALYLDLQRVRVEDQSPLIQCTKCLAFGHGRKFCTGNVDKCSHCGGPHLREECADYIAGIKPQCCNCLHSRLQSTDHNAFSVDCPTRKKWDYLARSNTAYI

Uniprot

H9JG79 A0A212EIV6 A0A2H1WF63 H9JWP7 A0A0K1IJN6 A0A2P8XUI0 + More
K7JYZ7 J9KRH3 K7JRS2

Pubmed

19121390 22118469 29403074 20075255

EMBL

BABH01002157 AGBW02014565 OWR41401.1 ODYU01008279 SOQ51725.1 BABH01018399 + More
BABH01018400 BABH01018401 KP771712 AKU04649.1 PYGN01001327 PSN35652.1 AAZX01016229 ABLF02020082 ABLF02020086 ABLF02020092 AAZX01023289

Proteomes

UP000005204 UP000007151 UP000245037 UP000002358 UP000007819

PRIDE

H9JG79 H9JWP7

Pfam

PF01826   TIL        + More
PF14529   Exo_endo_phos_2
PF00098   zf-CCHC
PF00078   RVT_1

Interpro

IPR002919   TIL_dom        + More
IPR036084   Ser_inhib-like_sf
IPR036691   Endo/exonu/phosph_ase_sf
IPR001878   Znf_CCHC
IPR005135   Endo/exonuclease/phosphatase
IPR036875   Znf_CCHC_sf
IPR000477   RT_dom

SUPFAM

SSF57567   SSF57567        + More
SSF56219   SSF56219
SSF57756   SSF57756

Gene 3D

3.60.10.10

ProteinModelPortal

H9JG79 A0A212EIV6 A0A2H1WF63 H9JWP7 A0A0K1IJN6 A0A2P8XUI0 + More
K7JYZ7 J9KRH3 K7JRS2

KEGG

105842324 no KO assigned | (RefSeq) uncharacterized LOC105842324

GO

GO:0003676 GO:0008270

Length:

460

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

0.00073

Exp number, first 60 AAs:

0

Total prob of N-in:

0.02501

outside

1 - 460

Pi

68.242399

Theta

94.529828

Tajima's D

-0.696149

CLR

450.849678

CSRT

0.196390180490975

Interpretation

Uncertain

Sequence

Summary

Ontologies

Topology

Population Genetic Test Statistics

Multiple alignment of Orthologues

Gene Tree