Gene

KWMTBOMO14497

Pre Gene Modal

BGIBMGA000164

Annotation

PREDICTED:_nephrin-like_[Bombyx_mori]

Location

Bomo_Chr24(+):8166509-8266750      View in EpiBrowser

Location in the cell

Extracellular   Reliability : 1.118 Nuclear   Reliability : 1.216 PlasmaMembrane   Reliability : 1.313

CDS

ATGTCTGAAAACGTGCTCTCCTTCACGGCCGATGCGTCCGATAACAAAGCGCGTTACAGTTGTGAAGCCAAGAATATCATGATCAGCAACACGCTGAAGGCTGAGATCGACCTGACTGTGCTCTTTGCTCCCGCCCACGTCACTATATCTGGACCCTCTGAAGCGAGAGTCGGCGATCCAGTTCCCCTGACCTGCAGTACAGCTCCTTCGAATCCAGCTGCTGAGATTAAGTGGCTAGTCATAGGGAAGCACCATAAAGAAGCTAGTAATAGAACCGTTATTTCTCCAGAAGGTGGCTGGATTACCTCGTCCAACATAACCGTGATAGTGGAACCGAATAGAAGGTCAATAGTAGTGGTGTGCCACGGCATCAACGCTCAGCTGACGGAAAACGTGATCGCCACTCACACCATCAATGTCTTGTATCCACCTTCGGCGCCCATGATAACTGGCTACGTGCCCGGCACAACCCTCGCTGCCGGAACAGTTCAGAAGCTGGCCTGCATCTCGACTGGAGGGAACCCTTTGGCCACTCTCACGTGGTTTAAGAATGACAAAAAGATACATTCAACAACTAAGACAACGGACAAAGCGGTGTCAGCAGAGATCTCGATCCTGACCAATGTGACCGACAATCAGGCCCAGTACAGATGTGAGGCCACAAACAGTGCGACTGAGATACCACTCTTTGAAACAGTCACACTAAACGTACACTTCGCGCCTGAAGCTGTCAAGGTCCGAGCTGAACCCGACGTGCTTAAGCCGGGAATCGAAGCGACACTGATCTGCGACTCCGCGTCTAGCAACCCGCCTGCCACCCTGTCGTGGTGGCGTGATGGGATCCCAGTTCAAAGTGCTCCGATGCAGCTCAAGAAAGGTCTGCACGGGGGTAAAGTGTCTACAATAGAACTGAAACTCAGCATCACTAAGGAGATGAACGGTGCTGTCTACACGTGCCAGGCCACCAACGAGGTCTTGCAGAGAAGCGTCCATGATGCTTTGGCCTTGAAGGTTTTGTATGCACCAATATTCGACGACACGACATCTTACAACACAGTGGGAATCGAAAACGAGCCGTTGATAATATCGGTCAGAGCGGATGGCAACCCGCCCAGCATCACCTACACGTGGACGAAGGACGGCCTTCCCATCACACAGTCCTCCTACAGCAGCGGCAATGACAGGATAATATCAGAAGGCAGCATGCTGAACATGACGAAATTAACACGTCACGATGCCGGGATATACACTTGTGAGGCTGTGAACTCTCAGGGAGCTGCTGTCGCCAATATTTCCGTATCAGTACACTATCCAGCGGGCATTAAATCGGTGTCTCAAAATGTGGTTGCGAACCCAAACGAAGACGCCGTTTTGTCTTGCACTGCGATCGGAAATCCTCTGTTAGCGGAGCACATTAAATGGGAACGCAAAGGGTACAAAATCGACCCCAAGTCTGTAACTTTTGAACCGAAGAATCTCACAAGTTATTTAATAATACGCAAGGCAAAAAGCGAGAACTTGGGTAATTTTCAGTGTGTGGTCAACAATGGTATTGGAAGTGCGACTAAACAAGACGTTATGCTTATAGTTAAGTTCAAACCCGAGATGGACACTTCACCTAACTTAGTCAAATCGGCCTCAAATGTTGGACAAGTTGGACGTTTGATGTGCAAATGCAAATCAGTACCAGCGCCTAGCTTTACCTGGTCCAAAAATGGAGTGAAGCTACCTGTAAATACATCTACGAAATATTTCGCGGAGTTCCACAAGAACGATCACATCACCTACACCTCGGTGCTGCTCATCAATGACGTGACCACTTCAGACTATGGGTCTTACGAGTGTGGCGCCAGGAACGAGCTTGGGTTCAGTACCACGACGGTGAAATTAGACGTGACCAGCGCACCAGATCAAGTGGTCTCGCTAACTGTAACAAATGTAACTCACAGTACAGTGACATTGGAGTGGGTACCAGGCTTCGACGGAGGACTGCAATCTTGGTATAGGATTCGATATAGAAAAGTGTTCGATGACGTGTACAAGTACGAAGATGTTCTGCCCAAGCACGCTACGAACTTCACCGTTCGTGGGCTCGAGAAGAACACCGATTACGTATTCTCCGTAATGGCTATTAACAAAATAGGGCAAAGCAAATACAGACCGGACGACACGAAGGCGACGACGCTGACTTCTTCGGAAGTAGGCGAACTGAGTACGGTATCCACTGAATACGTAGAGACACCTGACATATCCAAGCCTGTCATTGTTTACGTGTCTCTAACAGGAGCCGTCTTAGTATTGATAAATGTCGCATTGATTGCTTGTTTCGTTTGGAAGCGACGCTTGAGACGCATCAAAGAACAAGCCGGCCAAGCTTCCAAATCAGCCACAATAGAGATGTACGCTCCGTCGTCATACAACGACACCATGACCGGAGAAACCCTCAGCTCCGTCTCTGAGAAATCCGAGACTTACTCCCAGGACGACGGCGATGAGAGGCACCCTCCGCCGATCCCGGAGGTGCCGTCTATACACAATAGGCACATGCTTAGTCAGACAACTGATGCGTACCTAATGGAAGATCAGGGTCTAGTGATCCCACCACCCTTGGATTACCCCCCGCCGAACTACGCAGTGTACGACGGCGACCACTCCAGGACCCTGCCCCACCCTCACAGGCACAAGGACATGAGTGGACACAGCACGCTGGGCAGAAGCGCTGGTAAGCCGAATTACGTACCGGCTCCAAGTCCGATGCCGCCGCTGGATGGCTCCTACTACAACATGTCCTCGGACAGGTACCTGTCGTACCCACCACTCATCGGGGAGTATCTACAGCAGCAAGCCGGTCGCACCCCGACCCCTCCCCAGCAGTACGGAGCGCAGCCTCTGACGAAACCTCATCTGATGAACGGAACTGTGACAGGAGGATCGCCCTCGCACATGCCGAGTCCTCCTCACAATTATGGGCTTGACGTATCTATAGATCGTCAGTCGGCGGGCGGCACTCTGAGGCGGCAGCGGCTCGACAAGATGGCGGCGGTCCCCCCTCCTGACGTCACCGTGCTGCACCCGGGGAACTGCGCGCAGCACCAGATATCCCAGACGCCGTCTACGAAACAGCCGCAGTCGATCCTCAAGGACCCGTCGAGGCACAAGTACGGGCACCCCTACGGGAGTCCCGTCTCCTCCAGCACCCCACACAACAGCAACCAGATCCTGACGGTGCAGAACCTCACCAGCGACACTCCACAGTACGGAACCATCAAGAAGGAGAACAAAAAACAAAACATAGATATTGTTGAAATGACGTCAGCCCATTTCGCGTTCCCTGAACCTCCCCGGGTCACTTCGATTTTGAACCTTATGGAGTATATCCAAGCAGTTCATAATCTAACCACACAGATAAACGTCGTACCTGTATCGGGTTTCGCATTAACTTTTGTTCGTTGGTAA

Protein

MSENVLSFTADASDNKARYSCEAKNIMISNTLKAEIDLTVLFAPAHVTISGPSEARVGDPVPLTCSTAPSNPAAEIKWLVIGKHHKEASNRTVISPEGGWITSSNITVIVEPNRRSIVVVCHGINAQLTENVIATHTINVLYPPSAPMITGYVPGTTLAAGTVQKLACISTGGNPLATLTWFKNDKKIHSTTKTTDKAVSAEISILTNVTDNQAQYRCEATNSATEIPLFETVTLNVHFAPEAVKVRAEPDVLKPGIEATLICDSASSNPPATLSWWRDGIPVQSAPMQLKKGLHGGKVSTIELKLSITKEMNGAVYTCQATNEVLQRSVHDALALKVLYAPIFDDTTSYNTVGIENEPLIISVRADGNPPSITYTWTKDGLPITQSSYSSGNDRIISEGSMLNMTKLTRHDAGIYTCEAVNSQGAAVANISVSVHYPAGIKSVSQNVVANPNEDAVLSCTAIGNPLLAEHIKWERKGYKIDPKSVTFEPKNLTSYLIIRKAKSENLGNFQCVVNNGIGSATKQDVMLIVKFKPEMDTSPNLVKSASNVGQVGRLMCKCKSVPAPSFTWSKNGVKLPVNTSTKYFAEFHKNDHITYTSVLLINDVTTSDYGSYECGARNELGFSTTTVKLDVTSAPDQVVSLTVTNVTHSTVTLEWVPGFDGGLQSWYRIRYRKVFDDVYKYEDVLPKHATNFTVRGLEKNTDYVFSVMAINKIGQSKYRPDDTKATTLTSSEVGELSTVSTEYVETPDISKPVIVYVSLTGAVLVLINVALIACFVWKRRLRRIKEQAGQASKSATIEMYAPSSYNDTMTGETLSSVSEKSETYSQDDGDERHPPPIPEVPSIHNRHMLSQTTDAYLMEDQGLVIPPPLDYPPPNYAVYDGDHSRTLPHPHRHKDMSGHSTLGRSAGKPNYVPAPSPMPPLDGSYYNMSSDRYLSYPPLIGEYLQQQAGRTPTPPQQYGAQPLTKPHLMNGTVTGGSPSHMPSPPHNYGLDVSIDRQSAGGTLRRQRLDKMAAVPPPDVTVLHPGNCAQHQISQTPSTKQPQSILKDPSRHKYGHPYGSPVSSSTPHNSNQILTVQNLTSDTPQYGTIKKENKKQNIDIVEMTSAHFAFPEPPRVTSILNLMEYIQAVHNLTTQINVVPVSGFALTFVRW

Uniprot

A0A0N0PA00   A0A3S2NCP6   A0A2A4IWZ6   A0A2A4IX72   A0A139WLP6   A0A1W4WJY9   + More
A0A1W4W8Q7   N6U7C2   A0A0T6ATC5   A0A1I8MG43   Q17EB4   B4MCQ7   A0A0A1XN41   W8AGU0   A0A034WJV1   B0W2H5   A1Z7J1   A0A0K8UT05   A0A1I8MG33   A0A0J9R9J1   B3N859   W8ASK6   B4P3C8   Q9V4Y0   A0A0P8Y1S3   B4MK54   B3MFE2   A0A0B4LEH1   A0A1W4UJL7   A0A0K8UX23   A0A0R1DM32   A0A0J9TWM0   B4KTR8   A0A1B0GHZ6   A0A336MT59   A0A3B0J269   B4HS98   N6VFH4   B4JVD6   A0A0R1DM24   A0A0P8XM21   Q0E9F2   A0A1W4UX38   A0A0J9R8H9   A0A0Q5WB65   Q28Y51   A0A0K8WGJ9   A0A182WXT9   A0A182I5W1   A0A182J0F9   A0A182KV59   A0A084WAR0   A0A182QEF0   A0A067RPG9   A0A182PM44   A0A182ND98   A0A182JYF8   A0A0P8ZLT9   A0A182U8V5   Q7PRK4   A0A182WFS3   A0A182MKW5   A0A182RL21   A0A0R1DM84   A0A182Y6U2   A0A182FUC2   A0A182FUC4   E0VBT1   T1HY22   A0A0K8SMC2   A0A0K8SPG1   A0A0A9W594   A0A0K8SQB0   A0A0K8SP48   A0A0A9X1V3   B4QG93   A0A0L0BRQ7   A0A1I8NFJ5   A0A1I8NFK6   A0A1I8NFJ2   A0A2J7RB58   A0A1I8PED7   A0A1I8PE51  

Pubmed

26354079    18362917    19820115    23537049    25315136    17510324    + More
17994087    25830018    24495485    25348373    10731132    12537568    12537572    12537573    12537574    16110336    17569856    17569867    22936249    17550304    10859168    15632085    20966253    24438588    24845553    12364791    25244985    20566863    25401762    26108605   

EMBL

KQ459286    KPJ02038.1    RSAL01000219    RVE44076.1    NWSH01006048    PCG63712.1    + More
PCG63713.1    KQ971319    KYB28870.1    APGK01036477    APGK01036478    KB740941    ENN77545.1    LJIG01022859    KRT78353.1    CH477283    EAT44865.1    CH940659    EDW71445.2    GBXI01001940    GBXI01000037    JAD12352.1    JAD14255.1    GAMC01018955    JAB87600.1    GAKP01003106    JAC55846.1    DS231827    EDS29363.1    AE013599    AAF59040.2    GDHF01024331    GDHF01024016    GDHF01022505    GDHF01000273    JAI27983.1    JAI28298.1    JAI29809.1    JAI52041.1    CM002911    KMY92349.1    CH954177    EDV59472.1    GAMC01018957    JAB87598.1    CM000157    EDW89401.1    AF254867    AAF77184.1    CH902619    KPU75758.1    CH963846    EDW72493.2    EDV35616.1    AHN56011.1    GDHF01033767    GDHF01021414    JAI18547.1    JAI30900.1    KRJ98391.1    KMY92350.1    CH933808    EDW09651.2    AJWK01010462    UFQS01002408    UFQT01002408    SSX13977.1    SSX33396.1    OUUW01000001    SPP75207.1    CH480816    EDW46993.1    CM000071    ENO01800.1    CH916375    EDV98404.1    KRJ98389.1    KPU75759.1    ABI31083.1    KMY92351.1    KQS70855.1    EAL26114.3    GDHF01002314    GDHF01001821    JAI50000.1    JAI50493.1    APCN01003525    APCN01003526    ATLV01022241    ATLV01022242    ATLV01022243    KE525330    KFB47304.1    AXCN02001786    KK852546    KDR21614.1    KPU75757.1    AAAB01008848    EAA07064.5    AXCM01002414    KRJ98388.1    DS235042    EEB10837.1    ACPB03011340    GBRD01011337    JAG54487.1    GBRD01010835    JAG54989.1    GBHO01043564    JAG00040.1    GBRD01010834    JAG54990.1    GBRD01010836    JAG54988.1    GBHO01029993    JAG13611.1    CM000362    EDX06243.1    JRES01001577    KNC21874.1    NEVH01006563    PNF38068.1   

Proteomes

UP000053268    UP000283053    UP000218220    UP000007266    UP000192223    UP000019118    + More
UP000095301    UP000008820    UP000008792    UP000002320    UP000000803    UP000008711    UP000002282    UP000007801    UP000007798    UP000192221    UP000009192    UP000092461    UP000268350    UP000001292    UP000001819    UP000001070    UP000076407    UP000075840    UP000075880    UP000075882    UP000030765    UP000075886    UP000027135    UP000075885    UP000075884    UP000075881    UP000075902    UP000007062    UP000075920    UP000075883    UP000075900    UP000076408    UP000069272    UP000009046    UP000015103    UP000000304    UP000037069    UP000235965    UP000095300   

PRIDE

A1Z7J1    Q9V4Y0    Q0E9F2   

Pfam

PF00041   fn3        + More
PF08205   C2-set_2
PF07679   I-set
PF13895   Ig_2
PF00047   ig

Interpro

IPR036116   FN3_sf        + More
IPR013162   CD80_C2-set       
IPR013783   Ig-like_fold       
IPR003961   FN3_dom       
IPR007110   Ig-like_dom       
IPR003599   Ig_sub       
IPR036179   Ig-like_dom_sf       
IPR003598   Ig_sub2       
IPR013098   Ig_I-set       
IPR003006   Ig/MHC_CS       
IPR003597   Ig_C1-set       
IPR013151   Immunoglobulin       

SUPFAM

SSF49265   SSF49265        + More
SSF48726   SSF48726       

Gene 3D

2.60.40.10    

CDD

cd00063  FN3

ProteinModelPortal

A0A0N0PA00   A0A3S2NCP6   A0A2A4IWZ6   A0A2A4IX72   A0A139WLP6   A0A1W4WJY9   + More
A0A1W4W8Q7   N6U7C2   A0A0T6ATC5   A0A1I8MG43   Q17EB4   B4MCQ7   A0A0A1XN41   W8AGU0   A0A034WJV1   B0W2H5   A1Z7J1   A0A0K8UT05   A0A1I8MG33   A0A0J9R9J1   B3N859   W8ASK6   B4P3C8   Q9V4Y0   A0A0P8Y1S3   B4MK54   B3MFE2   A0A0B4LEH1   A0A1W4UJL7   A0A0K8UX23   A0A0R1DM32   A0A0J9TWM0   B4KTR8   A0A1B0GHZ6   A0A336MT59   A0A3B0J269   B4HS98   N6VFH4   B4JVD6   A0A0R1DM24   A0A0P8XM21   Q0E9F2   A0A1W4UX38   A0A0J9R8H9   A0A0Q5WB65   Q28Y51   A0A0K8WGJ9   A0A182WXT9   A0A182I5W1   A0A182J0F9   A0A182KV59   A0A084WAR0   A0A182QEF0   A0A067RPG9   A0A182PM44   A0A182ND98   A0A182JYF8   A0A0P8ZLT9   A0A182U8V5   Q7PRK4   A0A182WFS3   A0A182MKW5   A0A182RL21   A0A0R1DM84   A0A182Y6U2   A0A182FUC2   A0A182FUC4   E0VBT1   T1HY22   A0A0K8SMC2   A0A0K8SPG1   A0A0A9W594   A0A0K8SQB0   A0A0K8SP48   A0A0A9X1V3   B4QG93   A0A0L0BRQ7   A0A1I8NFJ5   A0A1I8NFK6   A0A1I8NFJ2   A0A2J7RB58   A0A1I8PED7   A0A1I8PE51  

PDB

6IAA     E-value=1.44087e-22,     Score=267

KEGG

101736649    no KO assigned | (RefSeq) nephrin-like

GO

GO:0016021   GO:0036059   GO:0007523   GO:0007286   GO:0030036   GO:0061321   GO:0005917   GO:0097206   GO:0001745   GO:0007156   GO:0005886   GO:0007520   GO:0007157   GO:0007155   GO:0005515   GO:0008270   GO:0016491   GO:0043565   GO:0005634   GO:0005524   GO:0005507   GO:0004713   GO:0015930  

Length:

1151

Number of predicted TMHs:

1

Exp number of AAs in TMHs:

24.15593

Exp number, first 60 AAs:

0.00341

Total prob of N-in:

0.00118

outside

1  -  753

TMhelix

754  -  776

inside

777  -  1151

 

 

Pi

234.592819

Theta

150.664762

Tajima's D

2.016658

CLR

0.370113

CSRT

0.889455527223639

Interpretation

Uncertain