Gene

KWMTBOMO14494

Pre Gene Modal

BGIBMGA000068

Annotation

PREDICTED:_glucose_dehydrogenase_[FAD?_quinone]-like_[Bombyx_mori]

Location

Bomo_Chr24(-):7922889-7925699      View in EpiBrowser

Location in the cell

Cytoplasmic   Reliability : 1.137 PlasmaMembrane   Reliability : 1.405

CDS

ATGCTACCCGGTCTTTTTATTCTGCTCCAAAACTCGTACCAAGATTGGAACTATGTGTCCGAACCCGAGGAAGCTACAAAGAATCAACAAGTCGGTGCCTATAGAACGTCCGCAGGAAAATGTCTGGGTGGAAGCAGCAATATCAATCATTTTATACATCTACGAGGAGATCCATGCGACTTCGATTCTTGGGCAGCCTACCTTAAAGACGAATCTTGGTCTTATAAGAACGTTCTTCCGTATTTCCGGAAAAGTGAGACAGTCCAAGACGAAGACATCCTTAAATATTATGCCAATTTCCACGGTGTTGACGGTCCAGTAATTATAACCAGACAACCCGATGATTCCACCCGTAATATCATGGAGTCGTTCGAAGAAATTGGAGTACCATCGGTTTTAGACCTGAACACGAACAATACTGTTGGGTTCACGGAATCCTCTTTCATCATAGGCAACGGCCGAAGACAGAGTACTTCTCAAGCATACCTGAACAACTTGAAAAGAGATAATTTATACGTATTAACCGAAACTGTTGCTGAAAAAATTATTTTCGAAGATAATGTAGCTGTAGGTGTCATCTTAAGGCTTGGCAGCGGTGAAAAGATTACTGTCTACGCTAATAGAGAAGTCATTGTCTCTGCTGGAACATTTAACAGTCCAAAGCTACTCATGCTCTCCGGAATAGGCCCAGCCGAAGAACTCCAAAAATTTGGCATTGATGTCATTAAAGATCTGCCTGTGGGCAAGGACATGCAAGATCATTTTGCCGTACTGCTACTCAACAAATTGGAAAGATCCATAGAGATTTCCCAAATACCGCAATTAACACGATTGGCTTTCCCAGTTTTATTGGGAGGAATCAATTTGGACGGTTCTAAATGCTGTCCGGATTATCAGATCATAGGTTTGAAGTTCACCCATGATACGCCTTATTTTCTCCTCACTTGCACTGTACTTTTCGGTTTGAAACACGAAATATGTTCAAAGCTCAACGCAGAAACGATCGGCAGGAACCACCTGGTGACATTTATAGGAGCTTTTCATCCAGAGTCAAGAGGCTATGTGAAACTGAGAAGTGCAGACCCGAATGACGACCCGATCATATCCCAATCATTTTACAGCAATGCGAAAGACTTTGACAACATGAAAAAGTATGTCAAACATTTCTTAACTGTATACAACTCATCTTATTTCCGAGAAATTAATGCGGAAGTGGCTGATCCGGGGCTGGATGAATGCGGGGAAATGTCCTTAGATAATGAAGATTATTTGGAGTGCTACATTAAGGGTATGACGGTAACGATTTTTCACCAGACGAGCACATGCGCTATGGGCAGCGTGGTGGATAGCAACATGCAAGTGTATGGTGTGGAGAACCTCCGAGTTATCGATGCCAGTACAATGCCCAACATTACCAGAGCCAATACCCTAGCGGCCTCCATTATGATGGCAGAGAAAATGAGTGATGTGATAAAAAATAAATATAATCTTTAA

Protein

MLPGLFILLQNSYQDWNYVSEPEEATKNQQVGAYRTSAGKCLGGSSNINHFIHLRGDPCDFDSWAAYLKDESWSYKNVLPYFRKSETVQDEDILKYYANFHGVDGPVIITRQPDDSTRNIMESFEEIGVPSVLDLNTNNTVGFTESSFIIGNGRRQSTSQAYLNNLKRDNLYVLTETVAEKIIFEDNVAVGVILRLGSGEKITVYANREVIVSAGTFNSPKLLMLSGIGPAEELQKFGIDVIKDLPVGKDMQDHFAVLLLNKLERSIEISQIPQLTRLAFPVLLGGINLDGSKCCPDYQIIGLKFTHDTPYFLLTCTVLFGLKHEICSKLNAETIGRNHLVTFIGAFHPESRGYVKLRSADPNDDPIISQSFYSNAKDFDNMKKYVKHFLTVYNSSYFREINAEVADPGLDECGEMSLDNEDYLECYIKGMTVTIFHQTSTCAMGSVVDSNMQVYGVENLRVIDASTMPNITRANTLAASIMMAEKMSDVIKNKYNL

Cofactor

FAD

Similarity

Belongs to the GMC oxidoreductase family.

Uniprot

H9IS42   C7EPE2   A0A0L7L247   A0A2H1WPH8   A0A2A4IZ69   A0A0L7KN60   + More
A0A212FMS7   A0A0N1PIV1   A0A3S2LRK7   A0A2A4JWF9   A0A3S2N607   A0A2W1BRA5   A0A2H1VCU6   A0A2A4J139   A0A2H1WQ34   A0A2H1VP10   A0A2A4JYC1   A0A2H1V0S8   A0A0L7LL99   A0A0N0PDR9   A0A0L7LUK3   A0A2A4JE08   A0A2H1VB55   A0A2W1BEK9   A0A194QAM1   A0A2A4JF29   A0A2W1BU23   A0A2W1BQ09   A0A2H1W7M4   A0A2H1W336   A0A194QAR0   A0A0L7LPB4   A0A2W1BIV7   A0A2A4IZE5   A0A2H1VZZ7   A0A212EII3   A0A2H1VCV1   D0ABA6   A0A2H1VDA1   A0A212F6I0   A0A2H1W3T3   A0A194PPA0   A0A2W1BM44   A0A2H1W0I8   A0A212F6I8   A0A2A4JSK9   A0A0N1IPT1   A0A2A4JUI0   A0A0L7LQD8   A0A2H1VYA6   H9J869   A0A0N1I9P3   A0A194QGE4   A0A194QNE6   A0A2W1BPR7   A0A2W1BFD2   A0A0L7KY98   A0A2A4JQV7   A0A2W1B6G7   A0A2A4K9G4   H9JLQ9   A0A0L7L6H5   H9JRF5   A0A2H1V4R2   A0A2W1BHP2   A0A2A4K5W1   A0A2H1VDD9   A0A2W1BWE7   A0A2H1WHG3   A0A291P0W5   H9JLW3   A0A0L7KB12   A0A2A4K7J0   A0A2H1WZ72   A0A2A4K6C3   A0A0L7KQ89   A0A194R898   H9JLP6   H9J868   A0A1Z2RRI5   Q95NZ0   A0A2W1BIM1   A0A2H1V9N6   A0A2H1WHH0   H9JI92   A0A194PXZ3   A0A0L7KKV3   A0A2W1BCG7   A0A0L7LP50   A0A0L7L0I7   A0A194QC26   A0A1Q3FK91   B0WJG6   K7J277   A0A212FF54   A0A212F947   A0A1Y9H2C4   A0A2A3EM41   A0A182Q3I8   A0A182R5V7  

Pubmed

19121390    26227816    22118469    26354079    28756777    28986331    + More
28605547    11373299    20075255   

EMBL

BABH01024325    BABH01024320    GQ285072    ACT66690.2    JTDY01003559    KOB69344.1    + More
ODYU01010073    SOQ54917.1    NWSH01004322    PCG65227.1    JTDY01008771    KOB64409.1    AGBW02007651    OWR55045.1    KQ460044    KPJ18290.1    RSAL01000341    RVE42399.1    NWSH01000445    PCG76355.1    RVE42398.1    KZ149986    PZC75677.1    ODYU01001603    SOQ38054.1    NWSH01004424    PCG65132.1    ODYU01010216    SOQ55185.1    ODYU01003587    SOQ42538.1    NWSH01000427    PCG76483.1    ODYU01000155    SOQ34448.1    JTDY01000758    KOB75991.1    KPJ18288.1    JTDY01000066    KOB79079.1    NWSH01001885    PCG69794.1    ODYU01001607    SOQ38065.1    KZ150336    PZC71326.1    KQ459232    KPJ02522.1    NWSH01001625    PCG70657.1    KZ149963    PZC76280.1    KZ150085    PZC73783.1    ODYU01006844    SOQ49058.1    ODYU01006017    SOQ47491.1    KPJ02519.1    JTDY01000418    KOB77282.1    KZ150015    PZC74989.1    NWSH01004349    PCG65195.1    ODYU01005459    SOQ46343.1    AGBW02014643    OWR41285.1    SOQ38064.1    FP102341    CBH09301.1    ODYU01001935    SOQ38829.1    AGBW02010007    OWR49345.1    SOQ47492.1    KQ459603    KPI92960.1    PZC73780.1    SOQ46342.1    OWR49347.1    NWSH01000760    PCG74382.1    KPJ18289.1    NWSH01000559    PCG75661.1    JTDY01000335    KOB77647.1    ODYU01005196    SOQ45815.1    BABH01039860    BABH01039861    KPJ18287.1    KPJ02521.1    KQ461194    KPJ06879.1    PZC76281.1    PZC73782.1    JTDY01004415    KOB68187.1    PCG74381.1    KZ150274    PZC71662.1    NWSH01000039    PCG80370.1    BABH01005224    BABH01005225    BABH01005226    JTDY01002689    KOB70914.1    BABH01016356    ODYU01000650    SOQ35789.1    PZC73781.1    NWSH01000095    PCG79621.1    ODYU01001944    SOQ38845.1    KZ149916    PZC77944.1    ODYU01008704    SOQ52509.1    MF687606    ATJ44532.1    BABH01005279    JTDY01010191    KOB60265.1    PCG79620.1    ODYU01012146    SOQ58297.1    PCG79619.1    JTDY01007102    KOB65457.1    KQ460627    KPJ13480.1    BABH01005285    BABH01039855    BABH01039856    KY938814    ASA46455.1    AY035784    AY035785    AAK56551.1    AAK56552.1    KZ150303    PZC71523.1    ODYU01001405    SOQ37539.1    SOQ52508.1    BABH01022249    KQ459585    KPI98211.1    JTDY01009199    KOB63957.1    PZC71524.1    JTDY01000479    KOB76996.1    JTDY01003781    KOB69013.1    KPJ02540.1    GFDL01007123    JAV27922.1    DS231960    EDS29162.1    AAZX01008181    AGBW02008849    OWR52369.1    AGBW02009643    OWR50262.1    KZ288214    PBC32788.1    AXCN02000040   

Proteomes

UP000005204    UP000037510    UP000218220    UP000007151    UP000053240    UP000283053    + More
UP000053268    UP000002320    UP000002358    UP000075884    UP000242457    UP000075886   

PRIDE

H9IS42    C7EPE2    H9J869    H9JLQ9    H9JRF5    H9JLW3    + More
H9JLP6    H9J868    H9JI92   

Pfam

PF05199   GMC_oxred_C        + More
PF00732   GMC_oxred_N
PF03644   Glyco_hydro_85

Interpro

IPR036188   FAD/NAD-bd_sf        + More
IPR027424   Glucose_Oxidase_domain_2       
IPR000172   GMC_OxRdtase_N       
IPR007867   GMC_OxRtase_C       
IPR012132   GMC_OxRdtase       
IPR001878   Znf_CCHC       
IPR036875   Znf_CCHC_sf       
IPR005201   Glyco_hydro_85       

SUPFAM

SSF51905   SSF51905        + More
SSF57756   SSF57756       

Gene 3D

3.50.50.60     4.10.450.10    

ProteinModelPortal

H9IS42   C7EPE2   A0A0L7L247   A0A2H1WPH8   A0A2A4IZ69   A0A0L7KN60   + More
A0A212FMS7   A0A0N1PIV1   A0A3S2LRK7   A0A2A4JWF9   A0A3S2N607   A0A2W1BRA5   A0A2H1VCU6   A0A2A4J139   A0A2H1WQ34   A0A2H1VP10   A0A2A4JYC1   A0A2H1V0S8   A0A0L7LL99   A0A0N0PDR9   A0A0L7LUK3   A0A2A4JE08   A0A2H1VB55   A0A2W1BEK9   A0A194QAM1   A0A2A4JF29   A0A2W1BU23   A0A2W1BQ09   A0A2H1W7M4   A0A2H1W336   A0A194QAR0   A0A0L7LPB4   A0A2W1BIV7   A0A2A4IZE5   A0A2H1VZZ7   A0A212EII3   A0A2H1VCV1   D0ABA6   A0A2H1VDA1   A0A212F6I0   A0A2H1W3T3   A0A194PPA0   A0A2W1BM44   A0A2H1W0I8   A0A212F6I8   A0A2A4JSK9   A0A0N1IPT1   A0A2A4JUI0   A0A0L7LQD8   A0A2H1VYA6   H9J869   A0A0N1I9P3   A0A194QGE4   A0A194QNE6   A0A2W1BPR7   A0A2W1BFD2   A0A0L7KY98   A0A2A4JQV7   A0A2W1B6G7   A0A2A4K9G4   H9JLQ9   A0A0L7L6H5   H9JRF5   A0A2H1V4R2   A0A2W1BHP2   A0A2A4K5W1   A0A2H1VDD9   A0A2W1BWE7   A0A2H1WHG3   A0A291P0W5   H9JLW3   A0A0L7KB12   A0A2A4K7J0   A0A2H1WZ72   A0A2A4K6C3   A0A0L7KQ89   A0A194R898   H9JLP6   H9J868   A0A1Z2RRI5   Q95NZ0   A0A2W1BIM1   A0A2H1V9N6   A0A2H1WHH0   H9JI92   A0A194PXZ3   A0A0L7KKV3   A0A2W1BCG7   A0A0L7LP50   A0A0L7L0I7   A0A194QC26   A0A1Q3FK91   B0WJG6   K7J277   A0A212FF54   A0A212F947   A0A1Y9H2C4   A0A2A3EM41   A0A182Q3I8   A0A182R5V7  

PDB

4HA6     E-value=2.12365e-37,     Score=392

KEGG

101736392    K00108 choline dehydrogenase [EC:1.1.99.1] | (RefSeq) glucose dehydrogenase [FAD, quinone]-like

PATHWAY

00260    Glycine, serine and threonine metabolism - Bombyx mori (domestic silkworm)
01100    Metabolic pathways - Bombyx mori (domestic silkworm)

GO

GO:0016614   GO:0050660   GO:0016021   GO:0047875   GO:0003676   GO:0008270   GO:0005737   GO:0033925   GO:0016829   GO:0016491   GO:0043565   GO:0005634   GO:0005524   GO:0005507   GO:0004713   GO:0015930   GO:0055114  

Length:

497

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

0.01174

Exp number, first 60 AAs:

0

Total prob of N-in:

0.00010

outside

1  -  497

 

 

Pi

239.297322

Theta

187.275154

Tajima's D

0.973351

CLR

0.000011

CSRT

0.657567121643918

Interpretation

Possibly Positive selection