SGID Silkworm Genome Informatics Database
Gene
KWMTBOMO14490  Validated by peptides from experiments
Pre Gene Modal
BGIBMGA000158
Annotation
ecdysone_oxidase_[Bombyx_mori]
Location in the cell
Cytoplasmic   Reliability : 1.028 Extracellular   Reliability : 1.161 PlasmaMembrane   Reliability : 1.027
 

Sequence

CDS
ATGGCAGACGCGGCAACAGCAGTTATGGCTCTGGCGTATTTGTTCCAGTGGCCTCCCCAAGCAATAGTGCAGGATGGTGACACCTTTGATTTCGTCGTTGTCGGATCGGGATGTGGAGCTATTGTGGCTGATAGATTGTCGGAAAACAGTTCAGTGCGAGTTCTTTTGATTGAAGCAGGAACATACCCGTCGAACGAATCTATTATGCCTGGAACTTTTCCTTTACTCCAAAATTCATACGAGGACTGGAACGAGACATCGATCCCGGAGAGCACAACGAAACACCAAAAGATCGGCGCGTACAAGCTGTCGACGGGAAAAGCCTTGGGCGGAGGCAGCACTATCAATCACCTACTCCATCTCCGAGGAGACAAGGACGACTTCGATACTTGGGCGTCCTACCTTGGAGACGACTCTTGGTCATCCGCAAACGTCCGTAAGTACTTCAAGAAATCGGAGAACATGCTAGACGCAGATATAATGGCCAGTCACGCCGACTACCACGGGACTGAAGGTCCAGTGATGGTATCAAGGCAGCCCGACGACGCCACGCACAACTTATTGAAGGCTTTTAGCGATATCGGAGTGCCAACGGTGATTGACTTGAACGCGGATGACAACGTTGGATGTGCAGAGGCTTCATACATCATAGGTGACGGTGTGCGACAGAGCACTGCTTACGCGTACCTAAATAAAAAAACTAGAGATAATCTGTACGTGCTTACCGAAACATTAGCAGAAAAAATCATCATCGAAAACGACATAGCTAAAGGTGTTATCTTGCGGCTAGCAAGCGGCAAGAAAATCAATGTTTACGCTAGCAAAGAAGTTATTATATCGGCCGGATCATTCAACAGTCCAAAAATACTAATGCTCTCTGGGATCGGGCCAGCTGATCACCTGAAAAGCATGGGCATTGACGTCATCAAAGATCTACCTGTGGGCCAGGGAATGCAGGACCACAATGCACTTTTCCTAGTCAACAAATTGGAAGAATCAACGGCGACTTCGGAAACATTACCATTAACAAAATTTCCGTTCCCTATTCTATTGGCTAGCGTCAACCTAGATGATTCTAAAAGCTACGCCGACTATCTGCTTATTGGACTTGTATTCGCCCAGGACAAAGGCTACACCGATGTTACTTGTTCGACTCTCTTTAGCTTCACCGACGAAATATGCTCGAACTTTAGCGAAAGCGTCGCCGGTAGGAACCAATTCATTTCATTAATAGGCACATCCCAACCAAAATCCAGGGGCTACGTGCAGCTAAAAAGTTCAGATCCAGATGACAAACTAGTTATATCAGAATCATTTTATTCTGATCCCGAAGATTTTACTAACATGCTGAAGTATCTAACTCATTTTTTAACTATTTACAATTCCGCTTATTTCCAAGATATCAAAGCGGAAATAGCTGATCCCGGCTTGGAAGAATGCGGTGAGATGGACGTCAGTAGTGAGGATTATTGGAAGTGTTACATCAAGTCCATGACCGTCCACCTATTCCATTACTCCGGTACATGTGCCATGGGCAGTGTGGTGGACAGTAAAATGAAAGTGTACGGTATAGATAACCTCCGGGTTGTCGATGTGAGCACCATGCCTTTTATCGTCAGAGCCAATACCTTGGCGGCTGGCATAATGATGGCGGAAAAGATAAGTGACGACATTAAAAATGAATATTCCCTTTGA
Protein
MADAATAVMALAYLFQWPPQAIVQDGDTFDFVVVGSGCGAIVADRLSENSSVRVLLIEAGTYPSNESIMPGTFPLLQNSYEDWNETSIPESTTKHQKIGAYKLSTGKALGGGSTINHLLHLRGDKDDFDTWASYLGDDSWSSANVRKYFKKSENMLDADIMASHADYHGTEGPVMVSRQPDDATHNLLKAFSDIGVPTVIDLNADDNVGCAEASYIIGDGVRQSTAYAYLNKKTRDNLYVLTETLAEKIIIENDIAKGVILRLASGKKINVYASKEVIISAGSFNSPKILMLSGIGPADHLKSMGIDVIKDLPVGQGMQDHNALFLVNKLEESTATSETLPLTKFPFPILLASVNLDDSKSYADYLLIGLVFAQDKGYTDVTCSTLFSFTDEICSNFSESVAGRNQFISLIGTSQPKSRGYVQLKSSDPDDKLVISESFYSDPEDFTNMLKYLTHFLTIYNSAYFQDIKAEIADPGLEECGEMDVSSEDYWKCYIKSMTVHLFHYSGTCAMGSVVDSKMKVYGIDNLRVVDVSTMPFIVRANTLAAGIMMAEKISDDIKNEYSL

Summary

Cofactor
FAD
Similarity
Belongs to the GMC oxidoreductase family.
EMBL
BABH01024320    GQ285072    ACT66690.2    BABH01024325    JTDY01003559    KOB69344.1    + More
ODYU01010073    SOQ54917.1    ODYU01010216    SOQ55185.1    KQ460044    KPJ18290.1    RSAL01000341    RVE42399.1    KZ150085    PZC73783.1    NWSH01004322    PCG65227.1    ODYU01005459    SOQ46343.1    NWSH01001885    PCG69794.1    RVE42398.1    KZ149963    PZC76280.1    JTDY01000758    KOB75991.1    NWSH01000427    PCG76483.1    JTDY01008771    KOB64409.1    ODYU01006844    SOQ49058.1    AGBW02007651    OWR55045.1    KZ150336    PZC71326.1    FP102341    CBH09301.1    ODYU01003587    SOQ42538.1    NWSH01004349    PCG65195.1    NWSH01000445    PCG76355.1    SOQ46342.1    KZ149986    PZC75677.1    ODYU01001603    SOQ38054.1    ODYU01000155    SOQ34448.1    AGBW02010007    OWR49345.1    PZC76281.1    NWSH01001625    PCG70657.1    JTDY01000066    KOB79079.1    ODYU01001607    SOQ38065.1    KZ150015    PZC74989.1    OWR49347.1    KQ459232    KPJ02522.1    PZC73780.1    NWSH01004424    PCG65132.1    KPJ18289.1    KPJ02519.1    NWSH01000559    PCG75661.1    BABH01039860    BABH01039861    JTDY01000418    KOB77282.1    KPJ18288.1    ODYU01006017    SOQ47491.1    KPJ02521.1    NWSH01000760    PCG74382.1    FJ493468    ACL36977.1    ODYU01005196    SOQ45815.1    SOQ38064.1    NWSH01000039    PCG80370.1    KZ150274    PZC71662.1    KQ459603    KPI92960.1    PCG74381.1    SOQ47492.1    PZC73782.1    KQ461194    KPJ06879.1    KPJ18287.1    BABH01005285    ODYU01008704    SOQ52509.1    PZC73781.1    NWSH01000095    PCG79621.1    BABH01039855    BABH01039856    ODYU01001935    SOQ38829.1    SOQ52508.1    KZ150303    PZC71524.1    BABH01005224    BABH01005225    BABH01005226    JTDY01000335    KOB77647.1    KPJ18306.1    KZ149916    PZC77944.1    ODYU01012146    SOQ58297.1    KQ460627    KPJ13480.1    MF687606    ATJ44532.1    ODYU01000650    SOQ35789.1    ODYU01001944    SOQ38845.1    KQ459585    KPI98211.1    PCG79619.1    JTDY01004415    KOB68187.1    AGBW02014643    OWR41285.1    ODYU01012241    SOQ58442.1    BABH01016356    AY035784    AY035785    AAK56551.1    AAK56552.1    RSAL01000028    RVE51877.1    ODYU01002782    SOQ40702.1    PZC71523.1    KQ982905    KYQ49514.1    JTDY01003781    KOB69013.1    AJVK01026844    AJVK01026845    AJVK01026846    AGBW02009643    OWR50262.1    NWSH01004668    PCG64789.1    KZ150306    PZC71499.1    AGBW02008849    OWR52369.1    JTDY01002689    KOB70914.1    GDIP01222028    GDIP01209432    GDIP01052298    GDIP01045705    JAJ13970.1    KY938814    ASA46455.1    JR040861    AEY59320.1    BABH01003799    KPJ02554.1    ODYU01001405    SOQ37539.1    KPJ18321.1   
Pfam
PF00732   GMC_oxred_N        + More
PF05199   GMC_oxred_C
Interpro
IPR036188   FAD/NAD-bd_sf        + More
IPR000172   GMC_OxRdtase_N       
IPR012132   GMC_OxRdtase       
IPR007867   GMC_OxRtase_C       
IPR027424   Glucose_Oxidase_domain_2       
SUPFAM
SSF51905   SSF51905       
Gene 3D
PDB
4YNU     E-value=1.88616e-46,     Score=470

Ontologies

Topology

Length:
564
Number of predicted TMHs:
0
Exp number of AAs in TMHs:
0.1045
Exp number, first 60 AAs:
0.04218
Total prob of N-in:
0.00477
outside
1  -  564
 
 

Population Genetic Test Statistics

Pi
257.028791
Theta
174.440252
Tajima's D
1.356059
CLR
0.000011
CSRT
0.755562221888906
Interpretation
Possibly Positive selection

Multiple alignment of Orthologues

 
 

Gene Tree

 
 
Peptides ×
Source Sequence Identity Evalue
24093152 AFPAIIK 96.97 1e-15
27102218 SMTVHIFHYSGTCAMGSVVDSK 96.97 1e-15
24093152 KSEIIAGIQADGQPRPNQPK 96.43 4e-13
27102218 TRDNIYVITETIAEK 96.43 4e-13
28467696 KSENFGISNAQIER 96.43 4e-13
24093152 GYSFTTTAER 96.43 1e-12
24093152 SENFVR 96.30 3e-12
27102218 DNIYVITETIAEK 96.30 3e-12
24093152 GDKDDFDTWASYIGDDSWSSANVR 96.00 1e-10
25860555 RFYVPGSSVPIDVDVQHR 95.83 6e-10
24093152 GDITSPTINADNSCGNGWICEHR 95.83 6e-10
27102218 GFGHIGIIVPDVDVACAR 95.83 6e-10
28467696 GDKDCPGNAVCDSNAR 95.83 6e-10
24093152 AEFIECDITK 95.65 1e-09
27102218 FPFPIIIASVNIDDSK 95.65 1e-09
24093152 SMGIDVIK 95.45 1e-08
27102218 AEIADPGIEECGEMDVSSEDYWK 95.45 1e-08
28467696 SMTTPAVAQMISTMIYYK 95.45 1e-08
24093152 DDEVQVVR 95.24 8e-08
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