Gene

KWMTBOMO14483  Validated by peptides from experiments

Pre Gene Modal

BGIBMGA000072

Annotation

PREDICTED:_regulator_of_chromosome_condensation-like_[Papilio_xuthus]

Location

Bomo_Chr24(-):7626131-7637449      View in EpiBrowser

Location in the cell

Nuclear   Reliability : 2.254

CDS

ATGCCGGCGGCACGGGGTGTGAAGCGTGCTGCTTCCAAATCATCGACCACGACATCAGCTTCGGGACCGAAAAACAAGAAAAAACGCGGAGCAATACAGTTGGAGATACCCACTGCTCCAAAGAAGCGAGGACGTGTTCTGACATGTGGACAAGGAGACGTTGGCCAGCTCGGCCTTGGAGAAGACGTAGTGGAAACTACAAAATTCAAATATGTGACTGCATTAGGTGATAAAATAGTTGATGTGCAAGCAGGTGGTATGCACACTATAGCATTGGACAGCAGTGGAAAGATTTGGACTTTTGGTTGTAATGACGAAGGTGCCCTTGGACGTGCCACCAGCAATGAGAAGGATGAAGGGACTCCCAAACAGGTTTCTTTGCCTGTCGCAGCTGTGGCTGTCTCGGCTGGAGACTCACACTCTGCTGCTTTATTGCAGAATGGAGATGTTTATGCTTGGGGGTCTTTCCGAGATTCTCATGGTAGCATGGGACTGGTTGTCCGAGGGCGCGAAGGAAAACCCTGCAAAGAACCTGTTAAGATTGACATCGGAGAGCCAGCCGTAGAAATAGCATCAGGGGGTGATCATCTAGTTGTATTGACGACATCAGGCGGTGTATTCACACTGGGCTGCGGGGAACAAGGGCAGCTGGGCAGGCTGGCGCAGAGATCAGCGTCTCGAGACGCCAGGCAGGGCTTCAGCGCGCTGCTGGTGCCGGCGCGGGTGACGCTGCGGCAGGCGGCGGCGCGCGTGTGGGCGGGCCACCACGCCACCTTCGTGCTGGACGCGCAGCACGCCAGACTCTTCGCCTTCGGACTCAACAACTACGGACAGCTCGGCATAACGGGTGAGAAACGTAAAACAGCGTTGTTTTCTCCGACCGAGTGTGACGCACTACGAGCCGTCGGAGACGATCACGCGTGGAGCGCTGTGGCCCTCGGACAACATCACACACTGACGCTCGCTGCCAACGGACAGATATATGCGCTGGGACGTTGTGAATATGGGAGGCTAGGTCTGGGCGACAAATCTGGCGACGCGGAGACTCTAGAACTAATACCCAAGCTGCAGAACAAGAAATGCATCAGTATAGCGGCCGGCACCAGCAATTCCTTCGCCGTCACAGACTCCGGCGAAGTGTACTCTTGGGGCATGGGCAGCGAGGGGCAGCTGGGCACCGGAGAGAGCGAGGACCTCAACGAGCCCACCCTCGCCGCCGTCGACAGCCGTGCGCCCCTCCGCGTCTCCGCCGGCGGACAACACACCGTGCTGCTGGTCGAGGAAACATCGTCGCAGAGAGAACCTTCCCCGATTCCTGAACGTGAGACGGAATCCCAACAATCCGAGGACACCGAGGAGGAGGAGGAGGAGACGAGTAGAGCGGACATCACCGAGCAAGAGGGAGAGATCACCTCGACGTCTGCAGCCAAACCTGAGGACGTCTCCAACGATACGGAACCTCAGAAAGTGAACGGAGATGAGAAAGAGACTCCCATGGAGGTTGATGAAACTGACGCGGTACAAAAAGAGAAATCATCCGAGGAAGACGAGGCAGACGAAAGAGAAACGAAACCTGAGGAAGAGTCTAAGAGCGAGGTGCCGGAGCCGCGCGCCAGGCAACCCGACCCGCACAACGGCACGCACGCGCCCGCCTGCTGA

Protein

MPAARGVKRAASKSSTTTSASGPKNKKKRGAIQLEIPTAPKKRGRVLTCGQGDVGQLGLGEDVVETTKFKYVTALGDKIVDVQAGGMHTIALDSSGKIWTFGCNDEGALGRATSNEKDEGTPKQVSLPVAAVAVSAGDSHSAALLQNGDVYAWGSFRDSHGSMGLVVRGREGKPCKEPVKIDIGEPAVEIASGGDHLVVLTTSGGVFTLGCGEQGQLGRLAQRSASRDARQGFSALLVPARVTLRQAAARVWAGHHATFVLDAQHARLFAFGLNNYGQLGITGEKRKTALFSPTECDALRAVGDDHAWSAVALGQHHTLTLAANGQIYALGRCEYGRLGLGDKSGDAETLELIPKLQNKKCISIAAGTSNSFAVTDSGEVYSWGMGSEGQLGTGESEDLNEPTLAAVDSRAPLRVSAGGQHTVLLVEETSSQREPSPIPERETESQQSEDTEEEEEETSRADITEQEGEITSTSAAKPEDVSNDTEPQKVNGDEKETPMEVDETDAVQKEKSSEEDEADERETKPEEESKSEVPEPRARQPDPHNGTHAPAC

Uniprot

H9IS46   A0A2H1WLW9   A0A0N1I887   A0A0N1IBI6   A0A212FFS5   A0A2M4BM08   + More
A0A182G103   A0A2M4BM10   A0A182F957   A0A2M4BLR5   A0A2M4A4E4   A0A2M4A4V1   A0A2M3Z220   T1DNI4   W5JCJ2   A0A1Q3EWK3   A0A1Q3EWJ9   B0WZT7   Q170U4   A0A182VN51   A0A336LML3   A0A2J7QM13   A0A067QZU3   A0A182LAY1   Q7PFU0   A0A182I8Z3   A0A182J8T6   A0A182U0Q7   A0A182JVW0   A0A182QFE8   A0A182P7D4   A0A088A2K9   K7J3L1   A0A2A3EIC6   A0A232F0L5   A0A154PGP4   A0A1W4XHP3   A0A182VY01   A0A0L7RBD5   A0A2P8Z8U0   A0A0P4YTT8   E9FU66   A0A084VZN9   A0A0P5V3I1   A0A182MHG1   A0A1L8E655   A0A0P6GP46   A0A0P4ZI50   A0A0P5E774   U5EXC8   A0A0N8CFV1   A0A0N8CRR9   A0A0P6DI92   A0A0N0BG37   A0A0P5X079   A0A182R5S0   A0A0N7ZNN9   A0A0C9QLJ6   A0A0P5BSQ6   A0A1B0CJ09   T1PGJ3   A0A0P5G0I9   A0A0L0CQ00   A0A139WK14   A0A026W568   A0A0J7KNC9   A0A1B0D9S9   A0A2C9JH32   A0A2C9JH41   A0A034VHC3   A0A0B6Z548   W8BEE5   N6TX19   F5HJ84   A0A0A1WK84   E2AQP4   A0A0K8TK87   A0A1B0B9W2   E9J335   A0A0P6HCM1   W5M7K3   A0A0K8WA55   A0A1B6M1V1   A0A195D9R6   A0A151XED0   A0A1B0AZ37   A0A195F3N5   F4W524   A0A1I8QCW4   A0A1A9ZWI1   A0A158NE29   A0A1B0FK39   A0A1A9YAQ2   A0A195BP20   A0A151IF15   A0A1A9XXD5   A0A1A9W4J8  

Pubmed

19121390    26354079    22118469    26483478    20920257    23761445    + More
17510324    24845553    20966253    12364791    14747013    17210077    20075255    28648823    29403074    21292972    24438588    25315136    26108605    18362917    19820115    24508170    15562597    25348373    24495485    23537049    25830018    20798317    26369729    21282665    21719571    21347285   

EMBL

BABH01024294    ODYU01009556    SOQ54071.1    KQ460846    KPJ11995.1    KQ459286    + More
KPJ02033.1    AGBW02008771    OWR52582.1    GGFJ01004979    MBW54120.1    JXUM01135728    KQ568319    KXJ69056.1    GGFJ01004978    MBW54119.1    GGFJ01004879    MBW54020.1    GGFK01002363    MBW35684.1    GGFK01002347    MBW35668.1    GGFM01001737    MBW22488.1    GAMD01002845    JAA98745.1    ADMH02001893    ETN60600.1    GFDL01015362    JAV19683.1    GFDL01015399    JAV19646.1    DS232217    EDS37762.1    CH477468    EAT40461.1    EJY57703.1    UFQT01000022    SSX18011.1    NEVH01013216    PNF29644.1    KK853149    KDR10666.1    AAAB01008844    EAA45186.5    APCN01003138    AXCN02000044    KZ288252    PBC31032.1    NNAY01001394    OXU24132.1    KQ434899    KZC11035.1    KQ414617    KOC68130.1    PYGN01000144    PSN52909.1    GDIP01223179    JAJ00223.1    GL732524    EFX89525.1    ATLV01018895    KE525252    KFB43433.1    GDIP01105294    JAL98420.1    AXCM01006202    GFDF01000059    JAV14025.1    GDIQ01032398    JAN62339.1    GDIP01216330    JAJ07072.1    GDIP01192379    GDIP01146139    GDIP01143992    GDIP01122543    GDIP01079599    GDIP01009879    LRGB01002101    JAJ77263.1    KZS09166.1    GANO01002598    JAB57273.1    GDIP01135839    JAL67875.1    GDIP01105295    JAL98419.1    GDIQ01077240    JAN17497.1    KQ435793    KOX74234.1    GDIP01079600    JAM24115.1    GDIP01227625    JAI95776.1    GBYB01004419    JAG74186.1    GDIP01180616    JAJ42786.1    AJWK01013945    KA647819    AFP62448.1    GDIQ01254978    JAJ96746.1    JRES01000080    KNC34341.1    KQ971328    KYB28388.1    KK107474    EZA50174.1    LBMM01005176    KMQ91749.1    AJVK01028443    GAKP01017432    GAKP01017430    GAKP01017428    GAKP01017426    GAKP01017425    GAKP01017422    GAKP01017420    JAC41522.1    HACG01016607    CEK63472.1    GAMC01018406    JAB88149.1    APGK01057312    KB741280    KB631604    ENN70867.1    ERL84585.1    EGK96345.1    GBXI01014828    JAC99463.1    GL441804    EFN64233.1    GDAI01002984    JAI14619.1    JXJN01010624    GL768055    EFZ12764.1    GDIQ01021136    JAN73601.1    AHAT01009530    GDHF01030331    GDHF01004273    JAI21983.1    JAI48041.1    GEBQ01010061    JAT29916.1    KQ981082    KYN09660.1    KQ982254    KYQ58736.1    JXJN01006156    KQ981820    KYN35190.1    GL887596    EGI70720.1    ADTU01012636    CCAG010003334    KQ976424    KYM88262.1    KQ977830    KYM99401.1   

Proteomes

UP000005204    UP000053240    UP000053268    UP000007151    UP000069940    UP000249989    + More
UP000069272    UP000000673    UP000002320    UP000008820    UP000075903    UP000235965    UP000027135    UP000075882    UP000007062    UP000075840    UP000075880    UP000075902    UP000075881    UP000075886    UP000075885    UP000005203    UP000002358    UP000242457    UP000215335    UP000076502    UP000192223    UP000075920    UP000053825    UP000245037    UP000000305    UP000030765    UP000075883    UP000076858    UP000053105    UP000075900    UP000092461    UP000095301    UP000037069    UP000007266    UP000053097    UP000036403    UP000092462    UP000076420    UP000019118    UP000030742    UP000000311    UP000092460    UP000018468    UP000078492    UP000075809    UP000078541    UP000007755    UP000095300    UP000092445    UP000005205    UP000092444    UP000092443    UP000078540    UP000078542    UP000091820   

PRIDE

H9IS46   

Pfam

PF00415   RCC1        + More
PF00338   Ribosomal_S10

Interpro

IPR000408   Reg_chr_condens        + More
IPR009091   RCC1/BLIP-II       
IPR036838   Ribosomal_S10_dom_sf       
IPR027486   Ribosomal_S10_dom       
IPR005729   Ribosomal_S10_euk/arc       
IPR001848   Ribosomal_S10       

SUPFAM

SSF50985   SSF50985        + More
SSF54999   SSF54999       

Gene 3D

2.130.10.30     3.30.70.600    

ProteinModelPortal

H9IS46   A0A2H1WLW9   A0A0N1I887   A0A0N1IBI6   A0A212FFS5   A0A2M4BM08   + More
A0A182G103   A0A2M4BM10   A0A182F957   A0A2M4BLR5   A0A2M4A4E4   A0A2M4A4V1   A0A2M3Z220   T1DNI4   W5JCJ2   A0A1Q3EWK3   A0A1Q3EWJ9   B0WZT7   Q170U4   A0A182VN51   A0A336LML3   A0A2J7QM13   A0A067QZU3   A0A182LAY1   Q7PFU0   A0A182I8Z3   A0A182J8T6   A0A182U0Q7   A0A182JVW0   A0A182QFE8   A0A182P7D4   A0A088A2K9   K7J3L1   A0A2A3EIC6   A0A232F0L5   A0A154PGP4   A0A1W4XHP3   A0A182VY01   A0A0L7RBD5   A0A2P8Z8U0   A0A0P4YTT8   E9FU66   A0A084VZN9   A0A0P5V3I1   A0A182MHG1   A0A1L8E655   A0A0P6GP46   A0A0P4ZI50   A0A0P5E774   U5EXC8   A0A0N8CFV1   A0A0N8CRR9   A0A0P6DI92   A0A0N0BG37   A0A0P5X079   A0A182R5S0   A0A0N7ZNN9   A0A0C9QLJ6   A0A0P5BSQ6   A0A1B0CJ09   T1PGJ3   A0A0P5G0I9   A0A0L0CQ00   A0A139WK14   A0A026W568   A0A0J7KNC9   A0A1B0D9S9   A0A2C9JH32   A0A2C9JH41   A0A034VHC3   A0A0B6Z548   W8BEE5   N6TX19   F5HJ84   A0A0A1WK84   E2AQP4   A0A0K8TK87   A0A1B0B9W2   E9J335   A0A0P6HCM1   W5M7K3   A0A0K8WA55   A0A1B6M1V1   A0A195D9R6   A0A151XED0   A0A1B0AZ37   A0A195F3N5   F4W524   A0A1I8QCW4   A0A1A9ZWI1   A0A158NE29   A0A1B0FK39   A0A1A9YAQ2   A0A195BP20   A0A151IF15   A0A1A9XXD5   A0A1A9W4J8  

PDB

3MVD     E-value=3.63264e-81,     Score=769

KEGG

101742720    K11493 regulator of chromosome condensation | (RefSeq) regulator of chromosome condensation

GO

GO:0003735   GO:0006412   GO:0015935  

Length:

552

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

0.00576

Exp number, first 60 AAs:

0

Total prob of N-in:

0.00307

outside

1  -  552

 

 

Pi

258.335368

Theta

172.968728

Tajima's D

0.995206

CLR

0.209152

CSRT

0.659217039148043

Interpretation

Uncertain