Silkworm Genome Informatics Database

Gene

KWMTBOMO14481

Annotation

PREDICTED:_uncharacterized_protein_LOC101742436_isoform_X1_[Bombyx_mori]

Location

Bomo_Chr24(-):7603747-7604179 View in EpiBrowser

Location in the cell

Nuclear Reliability : 1.177

CDS

ATGGGCCGTTCCCGAGACAACGATGCGATCAAAAGTAGCCTTATCATATCTGAAGTGCAGAAACGTCCATGTTTATTCGACACGAACGATACGAATTACGGCGACAGAGCGGAGAAGACGAGATGCTGGGAGGAGATCTGCGAGGTTGTGGTGCCGGGATGGACCGGCCTCGGGATGTCGGAGAAGTTCACCGCTGGTACGTTAACCGGACGATTTGCGGATGCGAGCGGTGCAGTGGGCGCGTGCGGCGCTCGGCGGCTCCGCGAACCGTCCTCTTGCATCGGTCGCGTTCGTAGTTGCGTGTCTTTGTTCCGTCGGCCAAACGCTTTCGAAACGTAA

Protein

MGRSRDNDAIKSSLIISEVQKRPCLFDTNDTNYGDRAEKTRCWEEICEVVVPGWTGLGMSEKFTAGTLTGRFADASGAVGACGARRLREPSSCIGRVRSCVSLFRRPNAFET

Uniprot

A0A194RJI2 A0A0N1IN35 A0A2H1VZ76 A0A1L8FQ83 A0A0J7L3L1 A0A0P4WND8 + More
A0A2G9R766 A0A0L7L0P1 A0A0L7KTV1 A0A1B6MEW8

Pubmed

26354079 27762356 26227816

EMBL

KQ460118 KPJ17712.1 KQ459286 KPJ02031.1 ODYU01005209 SOQ45842.1 + More
CM004477 OCT73733.1 LBMM01000937 KMQ97188.1 GDRN01058271 JAI65614.1 KV953483 PIO23718.1 JTDY01003746 KOB69052.1 JTDY01005909 KOB66491.1 GEBQ01005526 JAT34451.1

Proteomes

UP000053240 UP000053268 UP000186698 UP000036403 UP000037510

Pfam

PF10545   MADF_DNA_bdg        + More
PF00096   zf-C2H2
PF02944   BESS

Interpro

IPR006578   MADF-dom        + More
IPR013087   Znf_C2H2_type
IPR036236   Znf_C2H2_sf
IPR004210   BESS_motif
IPR039353   TF_Adf1

SUPFAM

SSF57667 SSF57667

ProteinModelPortal

A0A194RJI2 A0A0N1IN35 A0A2H1VZ76 A0A1L8FQ83 A0A0J7L3L1 A0A0P4WND8 + More
A0A2G9R766 A0A0L7L0P1 A0A0L7KTV1 A0A1B6MEW8

KEGG

101742436 no KO assigned | (RefSeq) uncharacterized LOC101742436

GO

GO:0003676 GO:0005634 GO:0003677

PANTHER

PTHR12243

Subcellular location

Nucleus

Length:

112

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

0.00728

Exp number, first 60 AAs:

0.00364

Total prob of N-in:

0.47628

outside

1 - 112

Pi

340.547127

Theta

238.190904

Tajima's D

1.35348

CLR

0.373606

CSRT

0.756062196890156

Interpretation

Uncertain

Sequence

Summary

Ontologies

Topology

Population Genetic Test Statistics