SGID Silkworm Genome Informatics Database
Gene
KWMTBOMO14480
Pre Gene Modal
BGIBMGA000073
Annotation
PREDICTED:_uncharacterized_protein_LOC101742436_isoform_X2_[Bombyx_mori]
Location in the cell
Nuclear   Reliability : 4.264
 

Sequence

CDS
ATGAAACGAGCTATTTTCGTTCCCAGAAAGCCAAGGTACTCCCAGGACAAATACGAGTCATTCTCCGAAGTGTCCAACTCGCCGCAACACGCTCCGCCCGAGGACGTCATCCCCAAGATCAAAACCGAGGTCATCGATAAACCGCTCGACCTAAAAACCAAAGCGGAGGTCACCGATAGACCGGACACCGTGGACAAATGCAACCAAACCGTCATAGACAAGAACCCGTCGTTGGAGATCAAGATCGACGCTAACTCAATCTTGCCCGACGACCACTTCGACGACGACAAACTCTTCATGAACTCCCTGATACCGTTGTTCAAGAAGATGAGCGACGACACCAGACTCCTGTGCAGGATCGAGGTGCTGAAGATCATACGATACGCCTTGCAAGGGCACAAGTGCTTCGAAGCTCTGAAGGTGGCCGAAGACAGCTTCTTCAGAGACAGAATGAGCGGGATCCTGGCAAAGCAGGAGGTGGACGTGGCGACGTCGAAGGGCGCGGAAACTAGGCTGTCGATGACGACGCGTTCGGCTGATGGCAGCAGACCAGTTAGGAAACGGAGGACGCGGTCGCCATCGCCGCTTCCAGTTACCACCAAGAGACGTGGGCCAGGACGTCCGAGGAAGATCCGCCCACCGCCGTCGGACTCTGACGAAGAGCAGCTCTCGAGGAAGCAGTGCCCCAAGCTGAAGGTGTCTCCCGTGGAGGTGCCGCGGATGTCGGAGATGGACGAGTCCCTCATACAGGTGACCAGTGTCGCGCAGATGTCCACGCCATTGTTTATGAAGATGTACAACTTGGAACGATCTAAGGCCGCCCCCGCACTGTCGAGCACGAATCAACCGATGCACGTGTCAGTCAAAACTGAACCCCTCGAAGACGCACAAAGTCAGCTCGCGAGCTAA
Protein
MKRAIFVPRKPRYSQDKYESFSEVSNSPQHAPPEDVIPKIKTEVIDKPLDLKTKAEVTDRPDTVDKCNQTVIDKNPSLEIKIDANSILPDDHFDDDKLFMNSLIPLFKKMSDDTRLLCRIEVLKIIRYALQGHKCFEALKVAEDSFFRDRMSGILAKQEVDVATSKGAETRLSMTTRSADGSRPVRKRRTRSPSPLPVTTKRRGPGRPRKIRPPPSDSDEEQLSRKQCPKLKVSPVEVPRMSEMDESLIQVTSVAQMSTPLFMKMYNLERSKAAPALSSTNQPMHVSVKTEPLEDAQSQLAS

Summary

Pfam
PF02944   BESS        + More
PF10545   MADF_DNA_bdg
Interpro
IPR004210   BESS_motif        + More
IPR006578   MADF-dom       
IPR039353   TF_Adf1       

Ontologies

Topology

Subcellular location
Nucleus  
Length:
302
Number of predicted TMHs:
0
Exp number of AAs in TMHs:
0.00266
Exp number, first 60 AAs:
0
Total prob of N-in:
0.06215
outside
1  -  302
 
 

Population Genetic Test Statistics

Pi
254.532516
Theta
185.556707
Tajima's D
1.339346
CLR
0
CSRT
0.747412629368532
Interpretation
Uncertain
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