Gene
KWMTBOMO14474
Annotation
reverse_transcriptase_[Lasius_niger]
Location in the cell
Nuclear Reliability : 4.028
Sequence
CDS
ATGACAAACAACAACAAAAACGAGCAGGAAAACAATGTGACTGATTTACATAATCCAAATATCCCATGGAAACGAATGCCAAACCAAAAAAGGAACCGTTCTCCTGAGGAAAATTCGCTTTCTAAATCTAATGAAGCCAAAAGGTTACATACAAGAAACCAACTGATCAGCCAAAACAGAGATATTACTGAATCTACAAGTAGACAAAGTCCAGAAATAGAAACAAGTAATCGTTACTCAATATTAGATGTTGAAGCTGATGACTCGGCTCTACAAAAGAAGACCCCCAAACCGCCACCCATTATACTATATGGTATTGAAGACCTTGCCAAATTAACAGAATTAATAGAACAAGTGTTGGAAAAGAATGACTACACCTTTAAAGTATCATCTAAAGACCAACTCATCATATCCTCTGCCACAATTGACAAGTATAAAATCCTTATAGAGCATATCAGAGCTAGAGGGCTAATAGGCCATACATTCACACGAAAGGATCAAAAATGTATGCGGATAGTAATCAAACATCTACACTTTAGCACACCTAAAGATGCCATCATTGATGCAATAGAGAAGACAGGTAACAAAGTACAAGGAGAGATCGTCACTGCACGAAAACCTGGCACCAAAGAACCATTAAATACATTTTTTGTCAATGTAGCATCCCATGAAAATAATAAACATGTCAAAGATATAAAATTCATTTACCACCAAAAAGTAAAAATAGAAGACCCGAAACGAAAGACAACTATAGTACAGTGTACAAGGTGTCAACAATATGGGCACAGCAAAAATTATTGTATGCGCCCATATAGATGCGTAAAATGTGCTGGTCCACATAAGACAACATTGTGCACTATTGACAAAAATACCCCAGCTGTGTGCATTCTCTGCTCAGGAAGTCATCCTGCTAGTTACAAAGGATGTATGGTATACAAAGAAATTCTTACAAGGAAGAAAATGGCTAATAAACCTAACACGAAATATAAAATCAACTCTCTTGCTACAAAAGATCCAACAGTATATAACGATACCCAAATAGAAACTGAAAAAGAAAGAAAAGTAAAAACCACCAAACAGCATGCTACTGTTCAAGAAAGTTTAAAACAATACAGTGAGGTTGTTAAAAAAGGTCTTGAAAATTCATCTCTCAAGAATCATACTTATGATCCAATCAAATATAAAAAAGATACGCAGGATCATCAGACATCATGGCCTTTAGATACCAGTACAGAAACACAGAGATCAAATACATACATAAATAGACATCAGCCAAGAACACAAAAACCTATGACAAAATACAACCATGACAATATGTCACAGAGAACACAATTAAAAAAAATAGATAGCGACAATGACACTCGAGAGCAAATACTTATGTTAGAAAAGGTCATAACAAGACAATCTGAAAGAATTGACCAACTTATAACACAGCTAAACACAATGATGAACCTTATCATTACACTCGAGCTAGAAATTTTGCTCAAGCTTAATAAAATAGACGTTGCGCTAATATCAGAAACTCATCTTAATGACAATAGAACAATTTTGATAGATAACTATAGTGTATATAACACAAATCATCCTGATGGAACTTCACATGGAGGAACCGCCGTTCTTATTAAAAATAACATAAGGCATAATGTACACAGTGCTTTTCGAGAGGAATGGCTCCAAGCTACTACTATAACTATAAACGAAAAGTTTGGGCCTATTAACATCAGTGCTATCTACTGTCCACCAAAACACAATCCTAAGCAAGATATGTTTAATAAATTCTTCAACACTTTGGGCAATAAATTTATAAGCGGAGGTGATTGGAACTGCAAGAATACATTCTGGGGATCACGGTTGACAACTACTAAGGGACGTGAACTGAAAAAAAGTGCTGATGATTGCAAGCTAACAATCCTTGGAACAGGTGAACCTACCTACTGGCCAACAGATACAAATAGACTTCCAGATCTGGTGGACTTTTTTATAATAAAGGGTCTTTCATATGTATATTTTGAAGTTGAGTCATCACTTGATTCTGTGTCGGATCACACTCCTGTCATAGCAACATTTAGCATCTCACCTATACAAAAAGAACAAAAAGAAGTACTATATAATTATAAAACAGACTGGAACTCATTCAGCGATTATCTAGAGGAAGAAATTAAACTTAGTGTTAAACTTAAAACAGAAGAAGATATAGATGAGGCAACATTTTATATCACAAACCTCATTCAAGTGGCTGCGTGGCATTCCACTCCAAAATTAAGCGATCATACTGTTAGTAATAATATACCTATGGAAATACGCCACAAACTTCAAGTAAAGAGAAAGCTAAGAAGGCAACTCCACATGACAAGATCCGATACAGACAGAAAAGAATTTAATAAAATCTCAAGAGAACTAAAAGAACTAATCAATGAATCTGTCAACTCAGCATTTCATCATAAAATATCAGGGCTCTCAGCATACAAGAAGGACAATTATTCTTTATGGAAAATCACCAAAAACTTCAAAAAACCTAAAAGCCATATTCCACCAATGAGGAAATCGCCAACCGACCCTTGGGCCAAGAGTACAACTGAAAAAGCTGAGCTATTTGCAAATTACTTGTATGAAATATTTGCCCCTAACCTATCACCAATGGAGGACTATGAAAAAGAAGTTGATGTCATGATTAATAGTGACCAGCAACTATCCCTGCCACTCAAATCCGTCACCCCCAGGGAACTTACGCAATGTATACAGTCTCTTAAAAATAAAAAAGCTCCTGGTTTTGATTTAATAACTGGTGAGGTACTTAAAAAATTGCCCAAAAAAGTAATAATATTTCTAACAATGTTATTCAATGCTATCCTCAGAGTACATTATTACCCAAAACTCTGGAAAATAGCACAAGTCTGCATGGTTATAAAGCCTGGAAAACCAGCGTCAGATCCAAGTTCATATAAGCCCATAAGTCTTCTACCTGTGTTGTCTAAGGTGTTTGAAACGGTATTTCTAGTCGAACAAGTACACAGAGTAGTTCATAAAATTCGACAATCCTTAGAAAAGAAGGAATACTGTTCTGCGGCATTTATTGACATCAAGCAAGCTTTCGATAAAGTCTGGCATAAGGGATTACTATATAAATTGAAAACCCTCCTACCGAATTCTTTTTTCATGCTCCTGAGATCCTACTTAAAACACAGAAAATTCCAAGTCAAATTTGGAGAGGACTGTTCGAAGCTGTATAATATTAACGCCTCCGTACCCCAGGGATCAGTGTTTGGTCCGGTCCTGCCTCAATCCCAAGATGTTGTAACTGCGACTTACGCTGACGATACAGCTTGTCTGGCAAGTGACATAGATCCACATAATGCATCATTACAACTACAAGTACAGCTTGACAAAGTAGATGCTTGGTTGCAGAGATGGCGATTAAAACCTAGTGTAACTAAGTCAACGCAGGTAACATTCACCCTCCGGAAAGGTGTCTGTGTCCCTGTTTACATGGAAGGTAAAGCTTTACCAAATGCCGACTCTGTGAAATACTTGGGATTACACCATATAAAAGCAAAAAAACGAGAAGCGAACTTGCAATTTCTCTCTTTGAATTGGTTACTGGGACGCCGGTCTCCACTGTCACTAAGTAACAAACTCCTGGTCTACAAAGCGATTATAAAACCTGTCTGGACTTATGGAATAGAACTGTGGGGTTCCGCTAGCAACTCGAATATCGAGATCTTACAGAGATTCCAGAACATTGCTCTTAGAACTATCTCAAACGCGCATTGGTTTGTAAGAAATAGTGAGATTCACGAATATTTAGAAATGCCGACTGTTCGAGAGGAAGTCAACAAGAACAGCAAGAGATATAAGGAAAGACTAAATGAGCACTCAAATGAATTGGCAAGGTGCCTGCTAGACACAACTGGAGATGGGAAACGTTTAAAAAGATGGCAAATTTTAGACTTAGACCAAAGATACTAA
Protein
MTNNNKNEQENNVTDLHNPNIPWKRMPNQKRNRSPEENSLSKSNEAKRLHTRNQLISQNRDITESTSRQSPEIETSNRYSILDVEADDSALQKKTPKPPPIILYGIEDLAKLTELIEQVLEKNDYTFKVSSKDQLIISSATIDKYKILIEHIRARGLIGHTFTRKDQKCMRIVIKHLHFSTPKDAIIDAIEKTGNKVQGEIVTARKPGTKEPLNTFFVNVASHENNKHVKDIKFIYHQKVKIEDPKRKTTIVQCTRCQQYGHSKNYCMRPYRCVKCAGPHKTTLCTIDKNTPAVCILCSGSHPASYKGCMVYKEILTRKKMANKPNTKYKINSLATKDPTVYNDTQIETEKERKVKTTKQHATVQESLKQYSEVVKKGLENSSLKNHTYDPIKYKKDTQDHQTSWPLDTSTETQRSNTYINRHQPRTQKPMTKYNHDNMSQRTQLKKIDSDNDTREQILMLEKVITRQSERIDQLITQLNTMMNLIITLELEILLKLNKIDVALISETHLNDNRTILIDNYSVYNTNHPDGTSHGGTAVLIKNNIRHNVHSAFREEWLQATTITINEKFGPINISAIYCPPKHNPKQDMFNKFFNTLGNKFISGGDWNCKNTFWGSRLTTTKGRELKKSADDCKLTILGTGEPTYWPTDTNRLPDLVDFFIIKGLSYVYFEVESSLDSVSDHTPVIATFSISPIQKEQKEVLYNYKTDWNSFSDYLEEEIKLSVKLKTEEDIDEATFYITNLIQVAAWHSTPKLSDHTVSNNIPMEIRHKLQVKRKLRRQLHMTRSDTDRKEFNKISRELKELINESVNSAFHHKISGLSAYKKDNYSLWKITKNFKKPKSHIPPMRKSPTDPWAKSTTEKAELFANYLYEIFAPNLSPMEDYEKEVDVMINSDQQLSLPLKSVTPRELTQCIQSLKNKKAPGFDLITGEVLKKLPKKVIIFLTMLFNAILRVHYYPKLWKIAQVCMVIKPGKPASDPSSYKPISLLPVLSKVFETVFLVEQVHRVVHKIRQSLEKKEYCSAAFIDIKQAFDKVWHKGLLYKLKTLLPNSFFMLLRSYLKHRKFQVKFGEDCSKLYNINASVPQGSVFGPVLPQSQDVVTATYADDTACLASDIDPHNASLQLQVQLDKVDAWLQRWRLKPSVTKSTQVTFTLRKGVCVPVYMEGKALPNADSVKYLGLHHIKAKKREANLQFLSLNWLLGRRSPLSLSNKLLVYKAIIKPVWTYGIELWGSASNSNIEILQRFQNIALRTISNAHWFVRNSEIHEYLEMPTVREEVNKNSKRYKERLNEHSNELARCLLDTTGDGKRLKRWQILDLDQRY
Summary
Uniprot
EMBL
Proteomes
Interpro
SUPFAM
SSF56219
SSF56219
Gene 3D
ProteinModelPortal
Ontologies
KEGG
GO
Topology
Length:
1321
Number of predicted TMHs:
0
Exp number of AAs in TMHs:
0.21955
Exp number, first 60 AAs:
0
Total prob of N-in:
0.00013
outside
1 - 1321
Population Genetic Test Statistics
Pi
338.631391
Theta
195.011007
Tajima's D
2.258002
CLR
0.064146
CSRT
0.914154292285386
Interpretation
Uncertain
