Silkworm Genome Informatics Database

Gene

KWMTBOMO14473

Pre Gene Modal

BGIBMGA000151

Annotation

PREDICTED:_ALK_tyrosine_kinase_receptor_[Bombyx_mori]

Location

Bomo_Chr24(+):7412859-7413681 View in EpiBrowser

Location in the cell

Nuclear Reliability : 3.387

CDS

ATGGCGACACGTAAACTAATAATATTTCTTGCGATCGTCGCGTTGGCTGCCGGCGAACATGAGAACGAAACAGAAAACAAAGCAGAGGAAGCCATGGAGGCGGAAAAGGACCAAAAACTGAGGTCCGCGTCGCCGGCCAGATCACAGGGCTCATTCCACAAGCTGACCGCCCTGATGAATAACACGGAGGAAAGACGCCAGTCGCGTCGGAAGAACAAGGATAATCTCAACAAGATCCTGCAGATGAACAGACGACACGATGACATGCTGAATGACAACGAAGGTATACCTATTAACCAGAGGACCGCACCTGACAACGACACAACACTCACGGACAAGATCAAGATCCTGCGTCCGCTCGTGCCGATGTATGAGCCGGAAAGCAAATACAATCACGTCTCGCAAGCTAGCGGGGTTTTTTGTAATTTCGAAACATCAAACGCGTCCATGGACTTATGTACGTGGCAGTGGAACTCCACGGTTTCGAGACACGGTCTGGGATTCAGTGTGATCACTCCGGACGATCTGGTGAACGTTAATAGTACAACTAAGGGTATGAGGTTCTCCGGGCCTTCGGAAGACGCTGATCGGAACCCCAAAGGTATGTTTGAACTTCATAGGTTGCGACTTTCTGGATCGTGTTAG

Protein

MATRKLIIFLAIVALAAGEHENETENKAEEAMEAEKDQKLRSASPARSQGSFHKLTALMNNTEERRQSRRKNKDNLNKILQMNRRHDDMLNDNEGIPINQRTAPDNDTTLTDKIKILRPLVPMYEPESKYNHVSQASGVFCNFETSNASMDLCTWQWNSTVSRHGLGFSVITPDDLVNVNSTTKGMRFSGPSEDADRNPKGMFELHRLRLSGSC

Similarity

Belongs to the protein kinase superfamily. Tyr protein kinase family.

Uniprot

H9ISC4 A0A2H1WPL5 A0A194RNX5 A0A2A4J6P9 A0A2W1CSA8 A0A0N1I9Y9 + More
A0A212FJE7

Pubmed

19121390 26354079 28756777 22118469

EMBL

BABH01024274 ODYU01010089 SOQ54947.1 KQ460118 KPJ17721.1 NWSH01002714 + More
PCG67631.1 NHMN01023779 PZC87380.1 KQ459286 KPJ02023.1 AGBW02008275 OWR53852.1

Proteomes

UP000005204 UP000053240 UP000218220 UP000053268 UP000007151

PRIDE

H9ISC4

Pfam

PF00629   MAM        + More
PF00057   Ldl_recept_a
PF07714   Pkinase_Tyr

Interpro

IPR036055   LDL_receptor-like_sf        + More
IPR002172   LDrepeatLR_classA_rpt
IPR013320   ConA-like_dom_sf
IPR000998   MAM_dom
IPR023415   LDLR_class-A_CS
IPR020635   Tyr_kinase_cat_dom
IPR008266   Tyr_kinase_AS
IPR000719   Prot_kinase_dom
IPR011009   Kinase-like_dom_sf
IPR001245   Ser-Thr/Tyr_kinase_cat_dom
IPR017441   Protein_kinase_ATP_BS

SUPFAM

SSF49899   SSF49899        + More
SSF57424   SSF57424
SSF56112   SSF56112

Gene 3D

4.10.400.10

CDD

cd00112 LDLa
cd06263 MAM

ProteinModelPortal

H9ISC4 A0A2H1WPL5 A0A194RNX5 A0A2A4J6P9 A0A2W1CSA8 A0A0N1I9Y9 + More
A0A212FJE7

KEGG

101735728 K05119 anaplastic lymphoma kinase [EC:2.7.10.1] | (RefSeq) ALK tyrosine kinase receptor

GO

GO:0016020 GO:0007165 GO:0000187 GO:0004714 GO:0048666 GO:0016021 GO:0004713 GO:0005524

SignalP

Position: 1 - 18, Likelihood: 0.976354

Length:

214

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

0.00406999999999999

Exp number, first 60 AAs:

0.00392

Total prob of N-in:

0.04686

outside

1 - 214

Pi

200.269003

Theta

190.012156

Tajima's D

0.177353

CLR

0

CSRT

0.419079046047698

Interpretation

Uncertain

Sequence

Summary

Ontologies

Topology

Population Genetic Test Statistics