Silkworm Genome Informatics Database

Gene

KWMTBOMO14471

Pre Gene Modal

BGIBMGA000150

Annotation

PREDICTED:_ADP-ribosylation_factor-like_protein_13B_[Papilio_xuthus]

Location

Bomo_Chr24(+):7374819-7381777 View in EpiBrowser

Location in the cell

Nuclear Reliability : 4.197

CDS

ATGGGTAATTGTTTTGGATTATTTCGGCGCAGCGGCGTTAGGCGGCAAATCGTTCTGATACTAATAGGCTTAGACAACGCGGGCAAAACGAAAACTGTGAATAACTTAGTGGGCGATAAAGATGACAAAGTTTTACCCACAATCGGTTTTAAAGCTGTTAATCTGGTGCATAAGGACACGCCCGTGACTATATACGATTTGGGCGGTGGGCCGAATTTTCGACAAATATGGCCACAGTATTACAGTGAAGTGCACGGGGTTATATTTGTTATTGATTCAAGCGATTGTTCGCGTTTGGACGAATGCAGAAGTGTGCTTGAAGATGTTTTGTCGCACGACAGAATATCTGGTAAACCTGTGCTTGTATTGGCCAACAAACAGGACAAGACCGGCGCCCTAGACGACATCGACGTTGTAGAGAAACTTAACATAGAACCACTGGTCAATAGATACCGATGTCCGACTCTAGTCGAATCGTACACAGCTAATATCGATACAAAATCGAAAAAGCTGAAGATCGACCCCGGCCTCCGGAAAGGTTACCACTGGCTTCTGAACTACATAATCCGACGCTACGGCGACATAAATTTGAGAGTACAAACCGACATCCACGCAGATCTGGAGAGACGGAAACGGATGCTCAACAAAGCTTCGAACACGAACTCACAGATGAGCAACAGCGACGACATCGCAACCCAAACGGGCTTCGAAAATCCGAATTACGACTTAACGAAATCGATTAATAACACCGAGATAATAATCGTCAAACCGATCAATCACAATCAGAACAGCATCGATTCTACAATAACCGTTGAGAGTATCGATAATTCGGAATCGACTAGCTGCGGTAAGCCGAAGTTGTCGCCATTATTCGGTCGTGCCAGTAACAGCCCTGCAACGGATATCGTTAAAATTGAATTGGAGCCCAAGAGCGCGTTCAGGAAGCTGTCGCCGATCGTGAGGAACAAAAGCGGCGGGAATCAACACATGGATTTCAAGAATCGACCTCAGTCGAGTCCCACTTTAAAGAAGATTAAGACCGAGCCCCACAGCAAGAACTCTTCGATGGTCGAAGACAAATCGGACACATCGTACGTTGGCGACGGGAACCGCACCTGGGACGGTGCAATGGTGAACCACAGCCGGGTACTAGTCAATGCTGCCGAACTAGCTCAGACGCAGAGGGAAGTCGTGCTTAACGATCGCGATTACACAACGAAATCGGAGGTAGCGCTGCAGCCGCTAACATTACCCATGTCCCCCCGGCCGGCCTCCGCCTCCTTGCTGGTCAGGAGACAACTAGAACTGTCGGGACAGCACAAACGGAGACTCAGCTTGCGATACATGCAACGCAATAAGACCAGCCCGGAACGTATCTCCATGCTTATATATGAACCGAGTAAGGTTCAACAGCGGCATTTAGACAAAGGGGACTTTGAGCACACGACAACAATTAATTGA

Protein

MGNCFGLFRRSGVRRQIVLILIGLDNAGKTKTVNNLVGDKDDKVLPTIGFKAVNLVHKDTPVTIYDLGGGPNFRQIWPQYYSEVHGVIFVIDSSDCSRLDECRSVLEDVLSHDRISGKPVLVLANKQDKTGALDDIDVVEKLNIEPLVNRYRCPTLVESYTANIDTKSKKLKIDPGLRKGYHWLLNYIIRRYGDINLRVQTDIHADLERRKRMLNKASNTNSQMSNSDDIATQTGFENPNYDLTKSINNTEIIIVKPINHNQNSIDSTITVESIDNSESTSCGKPKLSPLFGRASNSPATDIVKIELEPKSAFRKLSPIVRNKSGGNQHMDFKNRPQSSPTLKKIKTEPHSKNSSMVEDKSDTSYVGDGNRTWDGAMVNHSRVLVNAAELAQTQREVVLNDRDYTTKSEVALQPLTLPMSPRPASASLLVRRQLELSGQHKRRLSLRYMQRNKTSPERISMLIYEPSKVQQRHLDKGDFEHTTTIN

Uniprot

H9ISC3 A0A2W1B858 A0A3S2LHA0 A0A0N1PGY6 A0A212FJF0 A0A194RIS3 + More
A0A2H1VGH4 A0A2A4J7Y5

Pubmed

19121390 28756777 26354079 22118469

EMBL

BABH01024271 KZ150604 PZC70464.1 RSAL01000009 RVE53798.1 KQ459286 + More
KPJ02022.1 AGBW02008275 OWR53854.1 KQ460118 KPJ17723.1 ODYU01002431 SOQ39906.1 NWSH01002714 PCG67634.1

Proteomes

UP000005204 UP000283053 UP000053268 UP000007151 UP000053240 UP000218220 + More

PRIDE

H9ISC3

Pfam

PF00025 Arf

Interpro

IPR027417   P-loop_NTPase        + More
IPR006689   Small_GTPase_ARF/SAR
IPR005225   Small_GTP-bd_dom

SUPFAM

SSF52540 SSF52540

ProteinModelPortal

H9ISC3 A0A2W1B858 A0A3S2LHA0 A0A0N1PGY6 A0A212FJF0 A0A194RIS3 + More
A0A2H1VGH4 A0A2A4J7Y5

PDB

4M9Q E-value=4.92591e-28, Score=311

KEGG

101741851 K07962 ADP-ribosylation factor-like protein 13B | (RefSeq) ADP-ribosylation factor-like protein 13B

GO

GO:0005525 GO:0005622 GO:0007264 GO:0004672 GO:0005524 GO:0005634 GO:0005507 GO:0004713 GO:0016491 GO:0015930

Length:

486

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

0.00063

Exp number, first 60 AAs:

0.00063

Total prob of N-in:

0.00152

outside

1 - 486

Pi

242.711915

Theta

190.132223

Tajima's D

1.607004

CLR

0.179561

CSRT

0.811559422028899

Interpretation

Uncertain

Sequence

Summary

Ontologies

Topology

Population Genetic Test Statistics