SGID Silkworm Genome Informatics Database
Gene
KWMTBOMO14467  Validated by peptides from experiments
Pre Gene Modal
BGIBMGA000146
Annotation
PREDICTED:_uncharacterized_protein_LOC101746973_isoform_X2_[Bombyx_mori]
Location in the cell
Nuclear   Reliability : 3.21
 

Sequence

CDS
ATGCTCAGCTCGCAGTCAGCGTCCGAAAGTGAGGCGTCAGAGTCGCGCGCTTCCTCATGGAAACCATGGACAGCTATGGCAGACCTAGCTGAAGCAGTCGACGACCTCATCTGCAGTTTCGACTACATGGACACAGCTATGGACAACCTGGTCATGTTGGTGTTCATATGGATGGTGCTGTCCATAGCGATCATCGCGATCGCCAAATGGGCGTACGGGAGGTTCGCTAAAAAGACGACGGACGCTGATAAACCAAAAATCGATGAGACGAAGAAAACAACGAACGAAATAGTATCCAGTGCTGATAGTGTGCTCGCTACCAGTGCTAAAGTTAAGAGTGCCTCGTTCAAGCCGACTAAAGCGACGGGCTTCGTGCCCGCCACTCCACCGAACAAGAAGAGGTTGGGGCGCATGTCCCCGGGACCAGAGCAGTTGACCGTCAAAAAGCATCAGTCAGTGTCCGTGCCCACATGCACGGGCGGAGATCAGCCGAGCGTGCAATGGGTGAACGATGTACTGACGTGGCTCTACAACGATCTAGTTATCGTAAACGAACTCGTGCAGCAATGGATCTCGTCCATGAACGAGTTCTCGAAGAAATCCGTCGAGGAGCAAGGAATCGGCGTGGAGATAGTACGAGCGTTGGACAGCCACCCGCCCAATATATCGAATGTATTCAGCGAGTGTGACTCCAAGGATGACGTGACGATAACCTGCGACTGTGAAGCCACTCCAGCGTTTCAAGTTAAAGCCTTCAGTCAGCGAGGGGAGAAAGTGGAAGTGTCACATTACAGAGTCAACGTGAATAGGTTCCGCGCCCGCCTCAACGTGGTCTGCGTGACAGATAAGCTCACAGGAGACCTCAAGTTTGACGGGTGGCCAGAAGTCAAAGTGGCACTGGCGCCGGTCGGTCCTTTGAGGCCGAACGCCACTGAATCCAACCTACAGCAGTTGATCAGTGACATTGTCGTGAATGCCTTAAGAAATTCCCATCTGCAGTTTAATCTGTCTCAATACCCGACCTGTCCTAGGCTGAGACGTTACGTTGAGACATCCTCGCGCCTACCCCTGCACTATGATTCCATGTTACAGCACGACCGTCACATGTACACCTCGACTCCGAACTCAACGGCCGGCAGCGGTCTACTCGGAGACAAGAGGTTGCTGGTCAAGATCGTCGGTGCCAAGGACCTGGGAGGTAAAACTGGGTGCATAGCACCGTACTGCGTGGTGGAGATGGACGAGCCTCCCCAGAAGAACCAAACCGGCTTCAAGAAGGAAACCACGAGTCCTCAGTGGGACGAACACTTTTTGTTCGACCTGTCTCCGCAGACCGCGGAGTTGCTCTTTGAGGTCTACGACCGGACCGGACCCCCGTCCCCGGGGGGCGGATCCTCGCAGCACAGGTTCTTAGGTCTGGGCTTGGTCGGTATTGACGAACTGTTGGCGGCGCCCTCCCAGAGACAACAGCTGGCTCTGCAGACCAGGCCTATGGAACAACACGACGTCAGCGGCACCCTCACCGTCGAGTTCCTCTTCATCGACGGCCCCGACATCCCGGACTTCGGCTCCAGACCGGTCAAGATCAAGGAGAGCCTCAGGACCGTGTCCCCTCACGGCCAACTCACCACCACCACCAAGACCACCTTCCATCAGAACGGGATACCAGCACAGGACAACTCTAAGCTGACGGAGTCCGCTCTCAGGGAGCTGGAGCTCAGTCCGACAGGCGCCGCCAACAAGTCCACCCTCATCATACACTCGGTGCAGAGAGAACCCAAGAAGTCTATAATGGTCGAACTAACCGACTCCGGGAAATTCATTGAAGTCGAACGCGCAGACGCCATAGACAAACAGGAAACGGAAGCGAAACCATTAGATAAAATCGAAGAGGCGGTTACAGATAAAAAATCTGTCACCCCGAACCAATCTCCCGGCAAAAGTGTAAGGATCAAAGAGAACGGTAACAAAGTCAACGGAGAGAACAATGATTCGCAAGGAGGCTACGTGAACAACCAGACGGATAACATGTCCCCCGAGCCGGCTCCTAGGAAGAGAAGGAGAGATTTCTTCGGAACTATCAAGAGAAGACTGGGTCGATCTCGTACTCGCGGTCAGTCACTGGAGATGACGGACTCCGAACTGGAGACCCAGAACAGGATGCGTAGCGTCAGTGCCGAGAGGAACTCTCATGAAAAAGCACTGGCAATACCGAACCGCAACGTGTATTCGGCGGGCGCCTCTCCCGCGCAGTCCGGAGACGAATCCAGAACTTCAAGGAGCGAAGTGTCCGGATTCAGTACAGCGTCAGCGAGGACCTTCATTCACGAGGCCTCGACCTTGGTGCTGGAGACTATAGAGGCCGGTATAAAGAAGCATTACCTTGTGCCTCTGGCGATCGCTCAAAGGTCGAAGTGGCGACGGAAGGGCGTCAAACTGCATATTTACAATGAGCACACGTTCATTGCCAAACATCTGAGCGGCGGCACCGTGTGCGCCGTGTGCGACAAGCCGGTGGCACGGCGGCTCGGCAAGCAGGGCTACGAGTGCCGCGACTGCCGGCTGCGCTGCCACAAGCACTGCCACGTGCGTGCGGCCGCCGCCTGCCCCGCCTCCACCGTGCACGACATGGAGCTATCCATGCTCCCCGTGCTAACTGAATAG
Protein
MLSSQSASESEASESRASSWKPWTAMADLAEAVDDLICSFDYMDTAMDNLVMLVFIWMVLSIAIIAIAKWAYGRFAKKTTDADKPKIDETKKTTNEIVSSADSVLATSAKVKSASFKPTKATGFVPATPPNKKRLGRMSPGPEQLTVKKHQSVSVPTCTGGDQPSVQWVNDVLTWLYNDLVIVNELVQQWISSMNEFSKKSVEEQGIGVEIVRALDSHPPNISNVFSECDSKDDVTITCDCEATPAFQVKAFSQRGEKVEVSHYRVNVNRFRARLNVVCVTDKLTGDLKFDGWPEVKVALAPVGPLRPNATESNLQQLISDIVVNALRNSHLQFNLSQYPTCPRLRRYVETSSRLPLHYDSMLQHDRHMYTSTPNSTAGSGLLGDKRLLVKIVGAKDLGGKTGCIAPYCVVEMDEPPQKNQTGFKKETTSPQWDEHFLFDLSPQTAELLFEVYDRTGPPSPGGGSSQHRFLGLGLVGIDELLAAPSQRQQLALQTRPMEQHDVSGTLTVEFLFIDGPDIPDFGSRPVKIKESLRTVSPHGQLTTTTKTTFHQNGIPAQDNSKLTESALRELELSPTGAANKSTLIIHSVQREPKKSIMVELTDSGKFIEVERADAIDKQETEAKPLDKIEEAVTDKKSVTPNQSPGKSVRIKENGNKVNGENNDSQGGYVNNQTDNMSPEPAPRKRRRDFFGTIKRRLGRSRTRGQSLEMTDSELETQNRMRSVSAERNSHEKALAIPNRNVYSAGASPAQSGDESRTSRSEVSGFSTASARTFIHEASTLVLETIEAGIKKHYLVPLAIAQRSKWRRKGVKLHIYNEHTFIAKHLSGGTVCAVCDKPVARRLGKQGYECRDCRLRCHKHCHVRAAAACPASTVHDMELSMLPVLTE

Summary

EMBL
AGBW02010170    OWR49037.1    KQ460128    KPJ17572.1    NWSH01003634    PCG66021.1    + More
PCG66019.1    PCG66024.1    PCG66015.1    PCG66022.1    PCG66020.1    GEZM01073433    JAV65095.1    GEZM01073435    JAV65093.1    GEZM01073431    JAV65097.1    KQ971330    EEZ99736.1    GEZM01073436    JAV65092.1    GEZM01073434    JAV65094.1    GEZM01073432    JAV65096.1    GBBI01003524    JAC15188.1    GBRD01008893    JAG56928.1    GECZ01024406    GECZ01010708    JAS45363.1    JAS59061.1    GEBQ01003454    JAT36523.1    GBRD01002362    JAG63459.1    KQ414615    KOC68722.1    GL452737    EFN76946.1    KQ982628    KYQ53442.1    GL888355    EGI62210.1    KK107054    EZA61618.1    QOIP01000004    RLU23464.1    GECU01016751    JAS90955.1    KQ981522    KYN40737.1    NNAY01000788    OXU26508.1    KQ978143    KYM96814.1    GECU01005479    JAT02228.1    GL444070    EFN61313.1    KZ288204    PBC33168.1    AJWK01016976    AJWK01016977    AJWK01016978    AJWK01016979    AJWK01016980    GFDF01006135    JAV07949.1    GFDF01007102    JAV06982.1    GFDF01006131    JAV07953.1    GFDF01007101    JAV06983.1    GFDF01007108    JAV06976.1    GFDF01006132    JAV07952.1    GFDF01006136    JAV07948.1    GFDF01007107    JAV06977.1    GFDF01007104    JAV06980.1    GFDF01007103    JAV06981.1    GFDF01007109    JAV06975.1    APGK01057542    APGK01057543    KB741280    ENN70970.1    ENN70969.1    KB631620    ERL84737.1    GL763174    EFZ20103.1    DS235459    EEB15891.1    LJIG01000019    KRT86921.1    GFDF01007138    JAV06946.1    GFDF01007110    JAV06974.1    GFDF01007137    JAV06947.1    GFDF01007147    JAV06937.1    CH954179    KQS62139.1    KQS62134.1    GBRD01002898    GBRD01002363    JAG62923.1    GFDF01007175    JAV06909.1    KQS62143.1    KQS62129.1    CH933808    KRG04822.1    GAKP01015668    JAC43284.1    KRG04824.1    CM000158    KRJ99920.1    KRG04835.1    KQS62146.1    KRJ99929.1    KRG04825.1    GAKP01015653    JAC43299.1    EDV55178.1    CH916375    EDV98493.1    OUUW01000001    SPP72687.1    KRG04830.1    KQS62150.1    KRJ99926.1   
Pfam
PF00168   C2        + More
PF00130   C1_1
Interpro
IPR035892   C2_domain_sf        + More
IPR039934   C2CD2/C2CD2L       
IPR000008   C2_dom       
IPR002219   PE/DAG-bd       
Gene 3D
PDB
2YUU     E-value=3.21771e-05,     Score=116

Ontologies

Topology

Length:
887
Number of predicted TMHs:
1
Exp number of AAs in TMHs:
21.8278499999999
Exp number, first 60 AAs:
10.9225
Total prob of N-in:
0.99192
POSSIBLE N-term signal
sequence
inside
1  -  49
TMhelix
50  -  72
outside
73  -  887
 
 

Population Genetic Test Statistics

Pi
221.330997
Theta
162.66938
Tajima's D
1.36533
CLR
0.294338
CSRT
0.75961201939903
Interpretation
Uncertain
Peptides ×
Source Sequence Identity Evalue
26822097 AIAIPNR 100.00 2e-07
26280517 TFIVVPEIVQEIHVWTDK 100.00 2e-07
28467696 TGAYCIPVIEQVDPK 100.00 2e-07
26822097 HYIVPIAIAQR 100.00 4e-04
26280517 NVWVAR 100.00 4e-04
28467696 NVYPDMIK 100.00 4e-04
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