Silkworm Genome Informatics Database

Gene

KWMTBOMO14460 Validated by peptides from experiments

Pre Gene Modal

BGIBMGA000140

Annotation

PREDICTED:_CCAAT/enhancer-binding_protein_zeta_[Papilio_xuthus]

Location

Bomo_Chr24(+):7000125-7000585 View in EpiBrowser

Location in the cell

Nuclear Reliability : 3.129

CDS

ATGTTCACAGGAAAAGATGATCTCAGTTCTCTGTTTGCGTCAGCCGAAGAATTCTCAACTCTATTAGAAGACACGGCCGCGAACAAGAAGCAGGGTTCGAGCCAAGCAGTCTCCAACACGGACAATTCGAGCTTAAAACAACTGGCCTGGGAAGATAAAAGAAACAATTGGATCAAGGGATACAACAAAAAGATTTTGGGAAACAATAAGAGCGGGGGGAAATTTAAACACAAAATGGCCGACAGAAAGAAGACGGCCGCTAAGAATTTTGGCGGGAAAATTAAAATGCAGGAGAATAAGTTTGCGGGTAAAGGAAAACGCAAAGGCGGAACGGCGAACGGACCTGGTGGGAAGAAAAAAAGAATGAAATAG

Protein

MFTGKDDLSSLFASAEEFSTLLEDTAANKKQGSSQAVSNTDNSSLKQLAWEDKRNNWIKGYNKKILGNNKSGGKFKHKMADRKKTAAKNFGGKIKMQENKFAGKGKRKGGTANGPGGKKKRMK

Uniprot

H9ISB3 A0A2A4J9C7 A0A2W1BFR3 S4P9H8 A0A212EMU2 A0A0T6AXE7 + More
D6WGR9 Q29D87 A0A2R5LGT6 A0A0P4WBJ8

Pubmed

19121390 28756777 23622113 22118469 18362917 19820115 + More
15632085 17994087

EMBL

BABH01024234 BABH01024235 BABH01024236 NWSH01002269 PCG68727.1 KZ150181 + More
PZC72514.1 GAIX01009055 JAA83505.1 AGBW02013807 OWR42787.1 LJIG01022593 KRT79752.1 KQ971327 EEZ99621.2 CH379070 EAL30527.2 GGLE01004614 MBY08740.1 GDRN01076218 JAI62921.1

Proteomes

UP000005204 UP000218220 UP000007151 UP000007266 UP000001819

PRIDE

H9ISB3

Pfam

PF03914 CBF

Interpro

IPR016024   ARM-type_fold        + More
IPR040155   CEBPZ/Mak21-like
IPR005612   CCAAT-binding_factor

SUPFAM

SSF48371 SSF48371

ProteinModelPortal

H9ISB3 A0A2A4J9C7 A0A2W1BFR3 S4P9H8 A0A212EMU2 A0A0T6AXE7 + More
D6WGR9 Q29D87 A0A2R5LGT6 A0A0P4WBJ8

KEGG

101741098 K14832 ribosome biogenesis protein MAK21 | (RefSeq) CCAAT/enhancer-binding protein zeta

GO

GO:0042254 GO:0005634

PANTHER

PTHR12048

Length:

123

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

0

Exp number, first 60 AAs:

0

Total prob of N-in:

0.34535

outside

1 - 123

Pi

204.513517

Theta

154.425587

Tajima's D

0.98321

CLR

0

CSRT

0.655767211639418

Interpretation

Uncertain

Sequence

Summary

Ontologies

Topology

Population Genetic Test Statistics