Gene

KWMTBOMO14436

Pre Gene Modal

BGIBMGA000092

Annotation

autophagy_related_protein_Atg6_[Bombyx_mori]

Location

Bomo_Chr24(-):6349586-6351077      View in EpiBrowser

Full name

Beclin-1-like protein      

Alternative Name

Autophagy protein 6-like

Location in the cell

Cytoplasmic   Reliability : 2.335 Nuclear   Reliability : 2.383

CDS

ATGAGTGATTCAAAGACGTTCGTAAGTTTCTCTTGTCAGCGTTGTTTGCAGCCTTTGAAGCTGGACGATTCCCTGAACAACCTCGGCGAGCATACTATCGCCGACTTAACCCTTCAAATTCGAAGAAATAACGAGGCGGACTTGGATTTGCAGTCGTCCAGTCTTGATCATTATGTTCCACCATTTCGTATGTCGGAGTCCGGTAACGGTGCCAACGGCTTCATGGTAATATCGGACGGATGGGAGACCACCTCCTTAGGTCACCAGCTCCATGTAAAAGCCACTTTATTCGATCTATTATCTAACAATTCTTACGTCGACCATCCCTTATGCGATGAATGTACAGATACATTATTAGAGTTAATGGATAATCAGCTAAAGCAAACGGAAGCCGAATGGAAGGACTATAATGATTATTTAAAAAAATTAGAAGATGATAAAGAGGATTTGAATTTGGAAGGACTTGAGAAAGAATTGGACGATTGGAAACAAGAGCAGAGTAGATTGTTGCAAGAGCTGCAGGCTTTGCAGAAAGAAGAGCGAGCAATGAATGAGGAAATAGAGATCCAGGAGAGGGAGAAAGAGAGGCTAGATAAAGAACAGGATGTGTATTGGAGGGAGTACACGAAATATAGGAAAGATTTAATGACAACAGAAGACCAAATGAAGTTTTATGAATGTCAGCTGGCATACACACAGTCACAGTTGGAAAAATTAAAAAAAACTAATGTCTTCAAAGCTACCTTCCATATATCAGACTCTGGTCAGTTTGGAATCATTAATAATTTTCGCTTAGGTCGCTTGCCTACTGCACCGGTTGATTGGTCCGAGATCAATGCGGCATGGGGTCAAACTGTATTGCTCCTCTCTTCGTTAGCCAGAAAAATAAATTTTAATTTCCAGCGCTACAAATTAGTACCATACGGGAATCACTCATACATAGAAGTCTTGGAAGATCAGAAAGTCTTACCGTTATACGGTTCGGGTGGTTTCCGGTTTCTCTGGGATACCAAATTCGATGCGGCAATGGTCGCATTTTTAGATTGCCTGCAACAGTTCAAGGAGCAAGTGGAAATGGGTAATACGGGCTTTTGTCTTCCGTACAGAATAGACAAAGGCAAAATCGAGGATACAGCATCTCCACCACATGCGTACTCCATAAAGATCCAGTTCAATTCTGAGGAACACTGGACTAAAGCCCTTAAATATATGCTGACGAACTTAAAATGGGCCTTAACATGGATATCGTCACAGTTTTGTGAGGACAAATCTGAGCCACAATAA

Protein

MSDSKTFVSFSCQRCLQPLKLDDSLNNLGEHTIADLTLQIRRNNEADLDLQSSSLDHYVPPFRMSESGNGANGFMVISDGWETTSLGHQLHVKATLFDLLSNNSYVDHPLCDECTDTLLELMDNQLKQTEAEWKDYNDYLKKLEDDKEDLNLEGLEKELDDWKQEQSRLLQELQALQKEERAMNEEIEIQEREKERLDKEQDVYWREYTKYRKDLMTTEDQMKFYECQLAYTQSQLEKLKKTNVFKATFHISDSGQFGIINNFRLGRLPTAPVDWSEINAAWGQTVLLLSSLARKINFNFQRYKLVPYGNHSYIEVLEDQKVLPLYGSGGFRFLWDTKFDAAMVAFLDCLQQFKEQVEMGNTGFCLPYRIDKGKIEDTASPPHAYSIKIQFNSEEHWTKALKYMLTNLKWALTWISSQFCEDKSEPQ

Similarity

Belongs to the beclin family.

Keywords

Coiled coil   Complete proteome   Reference proteome  

Feature

chain  Beclin-1-like protein

Uniprot

H9IS66   B7TYK5   E7ECA2   A0A3S2TSE3   A0A1E1W539   A0A2H1W9H3   + More
K9LWS1   A0A2A4K9L2   A0A0N1PGZ9   A0A0N0PA01   A0A2W1BFQ3   M4H2K6   A0A212FA11   A0A0L7LV42   S4P4D5   A0A182M1Q2   A0A182W144   A0A182JZZ4   A0A182WV01   A0A182XX50   A0A182RRU4   A0A182UTD6   A0A182LAI3   A0A182I8M6   Q7PS87   A0A182ULE2   A0A182P2P5   A0A0C9QA36   A0A182NFZ6   A0A067REP6   A0A2J7Q2G3   A0A232F200   A0A182Q4I2   K7J252   B0WVM0   A0A1Q3F8K1   E2AG92   A0A026W4F3   A0A2A3EQ14   A0A088AB51   E2BHR6   U5EZ51   Q16T27   A0A182GX27   A0A0K8TRH3   A0A310S9V2   A0A1B6LM10   A0A0L7QY79   A0A1Y1L0H9   A0A1B6CM36   A0A195CMK2   A0A1B6F1N8   A0A084W802   A0A182JBX0   T1E8Z0   A0A2M4BNB7   A0A182F8R7   A0A2M3ZI18   A0A2M4AD54   A0A2M4ACX4   W5JLH6   A0A1L8DMY9   A0A0V0G9S1   A0A069DT97   A0A1B0CQ98   A0A151I3E5   A0A158NC53   A0A151XCQ6   A0A1W4XDM2   A0A151J998   A0A0P4VRW7   R4G472   A0A0A9YDV6   F4WYT7   A0A0T6AXV1   A0A0J7L416   A0A0N0BI39   A0A2S2P291   J9JUH7   B4K5A3   A0A1I8PQT5   A0A0Q9WZP9   A0A3B0KCJ6   B4MC00   A0A1I8NIJ5   B4JIH7   D6WPT7   A0A2R7WFE0   A0A0M4EGF2   B3M2Z8   A0A0R3NML8   Q298L1   B4G434   A0A0L0CJ74   Q9VCE1   A0A0K8W1C1   A0A1W4UJP7   A0A1A9VR08   A0A034WNY4   A0A240SXG3  

Pubmed

19121390    19470186    26354079    28756777    22118469    26227816    + More
23622113    25244985    20966253    12364791    14747013    17210077    24845553    28648823    20075255    20798317    24508170    30249741    17510324    26483478    26369729    28004739    24438588    20920257    23761445    26334808    21347285    27129103    25401762    26823975    21719571    17994087    25315136    18362917    19820115    15632085    26108605    10731132    12537572    12537569    25348373   

EMBL

BABH01024178    FJ416328    ACJ46062.1    HQ651091    ADV04043.1    RSAL01000009    + More
RVE53836.1    GDQN01008974    JAT82080.1    ODYU01007191    SOQ49755.1    JN705947    AFP66875.1    NWSH01000010    PCG80921.1    KQ460195    KPJ17218.1    KQ458995    KPJ04402.1    KZ150182    PZC72504.1    JQ822090    AFK91515.1    AGBW02009541    OWR50549.1    JTDY01000037    KOB79264.1    GAIX01009092    JAA83468.1    AXCM01000394    APCN01003089    AAAB01008844    EAA06006.4    GBYB01011263    JAG81030.1    KK852683    KDR18549.1    NEVH01019370    PNF22772.1    NNAY01001270    OXU24553.1    AXCN02000343    DS232128    EDS35627.1    GFDL01011202    JAV23843.1    GL439266    EFN67583.1    KK107429    QOIP01000014    EZA50965.1    RLU14887.1    KZ288194    PBC33818.1    GL448324    EFN84749.1    GANO01001424    JAB58447.1    CH477661    EAT37604.1    JXUM01094527    KQ564134    KXJ72720.1    GDAI01000634    JAI16969.1    KQ762629    OAD55654.1    GEBQ01015378    JAT24599.1    KQ414694    KOC63563.1    GEZM01073418    GEZM01073417    JAV65116.1    GEDC01028943    GEDC01022788    JAS08355.1    JAS14510.1    KQ977565    KYN01956.1    GECZ01025685    JAS44084.1    ATLV01021335    KE525316    KFB46346.1    GAMD01002333    JAA99257.1    GGFJ01005404    MBW54545.1    GGFM01007364    MBW28115.1    GGFK01005390    MBW38711.1    GGFK01005312    MBW38633.1    ADMH02001214    ETN63629.1    GFDF01006350    JAV07734.1    GECL01001997    JAP04127.1    GBGD01001576    JAC87313.1    AJWK01023284    KQ976508    KYM82771.1    ADTU01011653    KQ982298    KYQ58145.1    KQ979425    KYN21640.1    GDKW01001274    JAI55321.1    GAHY01001036    JAA76474.1    GBHO01015934    GBHO01004343    GBRD01012403    GBRD01012402    GDHC01007706    GDHC01003121    JAG27670.1    JAG39261.1    JAG53421.1    JAQ10923.1    JAQ15508.1    GL888463    EGI60591.1    LJIG01022610    KRT79646.1    LBMM01000840    KMQ97386.1    KQ435736    KOX76998.1    GGMR01010921    MBY23540.1    ABLF02028785    CH933806    EDW15103.1    KRG01372.1    OUUW01000007    SPP82731.1    CH940656    EDW58621.1    CH916369    EDV93058.1    KQ971354    EFA06871.2    KK854739    PTY18326.1    CP012526    ALC47441.1    CH902617    EDV42398.1    CM000070    KRT00355.1    EAL27944.2    CH479179    EDW24445.1    JRES01000321    KNC32301.1    AE014297    AY061424    GDHF01007430    JAI44884.1    GAKP01003474    JAC55478.1    JXJN01015477   

Proteomes

UP000005204    UP000283053    UP000218220    UP000053240    UP000053268    UP000007151    + More
UP000037510    UP000075883    UP000075920    UP000075881    UP000076407    UP000076408    UP000075900    UP000075903    UP000075882    UP000075840    UP000007062    UP000075902    UP000075885    UP000075884    UP000027135    UP000235965    UP000215335    UP000075886    UP000002358    UP000002320    UP000000311    UP000053097    UP000279307    UP000242457    UP000005203    UP000008237    UP000008820    UP000069940    UP000249989    UP000053825    UP000078542    UP000030765    UP000075880    UP000069272    UP000000673    UP000092461    UP000078540    UP000005205    UP000075809    UP000192223    UP000078492    UP000007755    UP000036403    UP000053105    UP000007819    UP000009192    UP000095300    UP000268350    UP000008792    UP000095301    UP000001070    UP000007266    UP000092553    UP000007801    UP000001819    UP000008744    UP000037069    UP000000803    UP000192221    UP000078200    UP000092460   

PRIDE

H9IS66    B7TYK5    E7ECA2    Q9VCE1   

Pfam

PF04111   APG6        + More
PF17675   APG6_N
PF15285   BH3

Interpro

IPR007243   Atg6/Beclin        + More
IPR041691   Atg6/beclin_CC       
IPR038274   Atg6/Beclin_C_sf       
IPR040455   Atg6_BARA       
IPR032913   BECN1       
IPR029318   BH3_dom       

Gene 3D

1.10.418.40    

ProteinModelPortal

H9IS66   B7TYK5   E7ECA2   A0A3S2TSE3   A0A1E1W539   A0A2H1W9H3   + More
K9LWS1   A0A2A4K9L2   A0A0N1PGZ9   A0A0N0PA01   A0A2W1BFQ3   M4H2K6   A0A212FA11   A0A0L7LV42   S4P4D5   A0A182M1Q2   A0A182W144   A0A182JZZ4   A0A182WV01   A0A182XX50   A0A182RRU4   A0A182UTD6   A0A182LAI3   A0A182I8M6   Q7PS87   A0A182ULE2   A0A182P2P5   A0A0C9QA36   A0A182NFZ6   A0A067REP6   A0A2J7Q2G3   A0A232F200   A0A182Q4I2   K7J252   B0WVM0   A0A1Q3F8K1   E2AG92   A0A026W4F3   A0A2A3EQ14   A0A088AB51   E2BHR6   U5EZ51   Q16T27   A0A182GX27   A0A0K8TRH3   A0A310S9V2   A0A1B6LM10   A0A0L7QY79   A0A1Y1L0H9   A0A1B6CM36   A0A195CMK2   A0A1B6F1N8   A0A084W802   A0A182JBX0   T1E8Z0   A0A2M4BNB7   A0A182F8R7   A0A2M3ZI18   A0A2M4AD54   A0A2M4ACX4   W5JLH6   A0A1L8DMY9   A0A0V0G9S1   A0A069DT97   A0A1B0CQ98   A0A151I3E5   A0A158NC53   A0A151XCQ6   A0A1W4XDM2   A0A151J998   A0A0P4VRW7   R4G472   A0A0A9YDV6   F4WYT7   A0A0T6AXV1   A0A0J7L416   A0A0N0BI39   A0A2S2P291   J9JUH7   B4K5A3   A0A1I8PQT5   A0A0Q9WZP9   A0A3B0KCJ6   B4MC00   A0A1I8NIJ5   B4JIH7   D6WPT7   A0A2R7WFE0   A0A0M4EGF2   B3M2Z8   A0A0R3NML8   Q298L1   B4G434   A0A0L0CJ74   Q9VCE1   A0A0K8W1C1   A0A1W4UJP7   A0A1A9VR08   A0A034WNY4   A0A240SXG3  

PDB

4DDP     E-value=2.19012e-80,     Score=762

KEGG

100216352    K08334 beclin | (RefSeq) autophagy related protein Atg6

PATHWAY

04136    Autophagy - other - Bombyx mori (domestic silkworm)
04137    Mitophagy - animal - Bombyx mori (domestic silkworm)
04140    Autophagy - animal - Bombyx mori (domestic silkworm)
04215    Apoptosis - multiple species - Bombyx mori (domestic silkworm)

GO

GO:0032465   GO:0006914   GO:0006897   GO:0000045   GO:0034272   GO:0000407   GO:0019898   GO:0034271   GO:0045324   GO:0032258   GO:0006995   GO:0009306   GO:0016322   GO:0061723   GO:0030097   GO:0009267   GO:0006979   GO:0035096   GO:0045824   GO:0050829   GO:0004930   GO:0007186   GO:0016021   GO:0006816   GO:0005507   GO:0004713   GO:0016491   GO:0015930  

PANTHER

PTHR12768   PTHR12768:SF6  

Length:

427

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

0.01154

Exp number, first 60 AAs:

0

Total prob of N-in:

0.00322

outside

1  -  427

 

 

Pi

200.150704

Theta

177.828838

Tajima's D

0.362675

CLR

0.405527

CSRT

0.471226438678066

Interpretation

Uncertain