Gene

KWMTBOMO14429

Pre Gene Modal

BGIBMGA000125

Annotation

PREDICTED:_uncharacterized_protein_LOC105390855_[Plutella_xylostella]

Location

Bomo_Chr24(+):5853584-5854579      View in EpiBrowser

Location in the cell

Nuclear   Reliability : 3.243

CDS

ATGGTTCGAATTACAACTTACGTATTTTTCGACATCGAAACAACAGGTTTGCCGTTTCAAGAAAGAAATAAAACTAAGATCACCGAATTATGTTTTTTGGCAGTGTCTAGAGATGATCTAGATATACAATCAGGTCTGCCACCCATTAAGAAGTTGTCTTTCGTACTGAACCCAGAAAAGAAAATTCATCCTGATGTTGTAGTTTTGACTGGCCTAACGAATGAGTCACTAAAGAATGCGCCGACATTTAAACAGAGAGCAAATGCTATAGTATCTTTTTTAAATGAACTTCCGAAGCCTATATGTTTAGTCGCGCATAATGGAAATTCATTCGATTATAAGATATTATTAGCAGAGTGCAACGATGCAGGCATTTTGTTGCCAAGTGACTTACTGTGCATAGACTCTTTGATTGGCTTCCGAAAAATTCTAAAGACCACTCAGAAGTCATTACCATTAAAAATGAATACTAGCAAAGACGATAGTGCTAGTGAATTGCTATGGCCAGAACTCGACGTGTCTACAGAAAATTGGGAAGAAATTGATAATCTGTGTGCCTCATTTAGCAAAGACACATGTATTGATGATGAAAAAAGTAAAAAAGAAAATGATTTAAATCAGCAAAAGTGTACGAATTTAAAGAAGGGTCGGAAAAATAAGAATGACCTTACAACTCAAGATCAAAGTTTGTCAATACAAAATAAAAGTACTAAAAAGAGGGAGTTTACTTTGACTGGTTTATATAAAAGACTACTTGATAAAGATGCAGTAAATGCACACAGAGCAGAAGATGACTGTGTTATACTTATAGAATGTGTATTGGCTCTACGAGATGAGTTCTTGACATGGGCTGATGAGTCTTGTAAAACAATACACCAAATCAAGCCTTTAATACGCTATTAG

Protein

MVRITTYVFFDIETTGLPFQERNKTKITELCFLAVSRDDLDIQSGLPPIKKLSFVLNPEKKIHPDVVVLTGLTNESLKNAPTFKQRANAIVSFLNELPKPICLVAHNGNSFDYKILLAECNDAGILLPSDLLCIDSLIGFRKILKTTQKSLPLKMNTSKDDSASELLWPELDVSTENWEEIDNLCASFSKDTCIDDEKSKKENDLNQQKCTNLKKGRKNKNDLTTQDQSLSIQNKSTKKREFTLTGLYKRLLDKDAVNAHRAEDDCVILIECVLALRDEFLTWADESCKTIHQIKPLIRY

Uniprot

H9IS98   A0A2A4JRW8   A0A2H1WDQ2   A0A194Q5X9   A0A0L7KPL8   S4PLU4   + More
A0A0N0PES1   A0A1Y1MQH1   S4PXS2   A0A182PMH4   D6WI30   A0A0N1IIR4   A0A182SXW8   A0A194Q5D3   A0A1B6FXI8   A0A0T6BBG6   A0A182RJN9   A0A0L7KQY3   A0A2A4K8M0   A0A139WK20   N6T731   A0A182Q4Y8   A0A182Y2E6   A0A182JHX3   A0A084WK02   A0A1B6L8W3   A0A182N976   J3JX86   A0A1S3CUY4   A0A1B6JLD2   E0W1R9   A0A067RLU5   A0A182VMN9   A0A182TV85   A0A182I4P2   Q5TQT2   A0A154PLK4   A0A0Q9XC88   B4KHL1   A0A182X4P5   A0A1I8N3X4   B7PN33   A0A182LK68   A0A182FDU9   A0A0L7R9E7   A0A1B6EAM9   A0A1W4V6M9   A0A2W1BL26   A0A0L8G521   A0A1Z5KVU7   H9JVW3   A0A232FJI8   A0A088A5Q7   V5HZ96   K7J083   B4N101   A0A023F6M6   A0A0K8W4C0   A0A0V0GB29   A0A1I8PB84   A0A1Q3FPV4   A0A034WIT6   B4M9B2   A0A1I8PQ47   A0A2A3E511   U5EQW5   B4JCS3   A0A151I4G8   A0A0J7KIH0   A0A131Z5C4   A0A151WQP9   A0A1S4EUT2   Q0C7B5   A0A195D0Q0   A0A0A1WSR5   A0A069DYI9   A0A182GUN5   B0WAN4   A0A023F8D4   A0A224XS15   A0A2P6KP25   A0A1I8MAA6   A0A2W1BSK7   Q9VQJ7   A0A0V0GCM6   B3NAN4   E1ZUW4   A0A0P5TK85   A0A2A4J5B2   A0A195FTI0   B4I2T4   B4NXB4   A0A0P5JYQ5   A0A0A9XWM0  

Pubmed

19121390    26354079    26227816    23622113    28004739    18362917    + More
19820115    23537049    25244985    24438588    22516182    20566863    24845553    12364791    14747013    17210077    17994087    25315136    20966253    28756777    28528879    28648823    25765539    20075255    25474469    25348373    18057021    26830274    17510324    25830018    26334808    26483478    10731132    12537568    12537572    12537573    12537574    16110336    17569856    17569867    26109357    26109356    20798317    17550304    25401762   

EMBL

BABH01024121    NWSH01000747    PCG74438.1    ODYU01007653    SOQ50614.1    KQ459460    + More
KPJ00769.1    JTDY01007828    KOB64914.1    GAIX01003850    JAA88710.1    KQ459838    KPJ19749.1    GEZM01024163    JAV87929.1    GAIX01004543    JAA88017.1    KQ971334    EEZ99699.1    KQ460141    KPJ17475.1    KPJ00753.1    GECZ01014862    JAS54907.1    LJIG01002295    KRT84645.1    JTDY01006795    KOB65683.1    NWSH01000066    PCG80012.1    KYB28263.1    APGK01041342    KB740993    KB632256    ENN76024.1    ERL90752.1    AXCN02000557    ATLV01024090    KE525349    KFB50546.1    GEBQ01019824    JAT20153.1    BT127855    AEE62817.1    GECU01007662    JAT00045.1    DS235873    EEB19651.1    KK852598    KDR20533.1    APCN01002341    AAAB01008960    EAL40132.3    KQ434972    KZC12749.1    CH933807    KRG03178.1    EDW12290.2    ABJB010351313    ABJB011001646    ABJB011007140    ABJB011048839    DS749781    EEC08005.1    KQ414627    KOC67478.1    GEDC01002364    JAS34934.1    KZ149984    PZC75739.1    KQ424055    KOF71670.1    GFJQ02007771    JAV99198.1    BABH01038693    NNAY01000123    OXU30753.1    GANP01004455    JAB80013.1    CH963920    EDW78163.1    GBBI01001830    JAC16882.1    GDHF01006368    JAI45946.1    GECL01000949    JAP05175.1    GFDL01005420    JAV29625.1    GAKP01005275    GAKP01005274    JAC53678.1    CH940654    EDW57788.1    KRF77953.1    KZ288400    PBC26259.1    GANO01004031    JAB55840.1    CH916368    EDW03162.1    KQ976448    KYM85872.1    LBMM01007086    KMQ90054.1    GEDV01002587    JAP85970.1    KQ982821    KYQ50184.1    CH477186    EAT48911.1    KQ977004    KYN06493.1    GBXI01012435    JAD01857.1    GBGD01002310    JAC86579.1    JXUM01000715    DS231873    EDS41588.1    GBBI01001116    JAC17596.1    GFTR01005104    JAW11322.1    MWRG01007752    PRD28085.1    PZC75740.1    AE014134    AY070563    AAF51172.1    AAL48034.1    GECL01000257    JAP05867.1    CH954177    EDV57557.1    GL434309    EFN75025.1    GDIP01126660    JAL77054.1    NWSH01002906    PCG67327.1    KQ981276    KYN43597.1    CH480820    EDW54079.1    CM000157    EDW87471.1    KRJ97169.1    GDIQ01191772    JAK59953.1    GBHO01019803    JAG23801.1   

Proteomes

UP000005204    UP000218220    UP000053268    UP000037510    UP000053240    UP000075885    + More
UP000007266    UP000075901    UP000075900    UP000019118    UP000030742    UP000075886    UP000076408    UP000075880    UP000030765    UP000075884    UP000079169    UP000009046    UP000027135    UP000075903    UP000075902    UP000075840    UP000007062    UP000076502    UP000009192    UP000076407    UP000095301    UP000001555    UP000075882    UP000069272    UP000053825    UP000192221    UP000053454    UP000215335    UP000005203    UP000002358    UP000007798    UP000095300    UP000008792    UP000242457    UP000001070    UP000078540    UP000036403    UP000075809    UP000008820    UP000078542    UP000069940    UP000002320    UP000000803    UP000008711    UP000000311    UP000078541    UP000001292    UP000002282   

PRIDE

H9IS98    H9JVW3    Q9VQJ7   

Pfam

PF00929   RNase_T        + More
PF10639   TMEM234
PF07757   AdoMet_MTase
PF13482   RNase_H_2

Interpro

IPR013520   Exonuclease_RNaseT/DNA_pol3        + More
IPR012337   RNaseH-like_sf       
IPR036397   RNaseH_sf       
IPR018908   TMEM234       
IPR029063   SAM-dependent_MTases       
IPR007110   Ig-like_dom       
IPR011671   tRNA_uracil_MeTrfase       
IPR038720   YprB_RNase_H-like_dom       

SUPFAM

SSF53098   SSF53098        + More
SSF53335   SSF53335       

Gene 3D

3.30.420.10    

ProteinModelPortal

H9IS98   A0A2A4JRW8   A0A2H1WDQ2   A0A194Q5X9   A0A0L7KPL8   S4PLU4   + More
A0A0N0PES1   A0A1Y1MQH1   S4PXS2   A0A182PMH4   D6WI30   A0A0N1IIR4   A0A182SXW8   A0A194Q5D3   A0A1B6FXI8   A0A0T6BBG6   A0A182RJN9   A0A0L7KQY3   A0A2A4K8M0   A0A139WK20   N6T731   A0A182Q4Y8   A0A182Y2E6   A0A182JHX3   A0A084WK02   A0A1B6L8W3   A0A182N976   J3JX86   A0A1S3CUY4   A0A1B6JLD2   E0W1R9   A0A067RLU5   A0A182VMN9   A0A182TV85   A0A182I4P2   Q5TQT2   A0A154PLK4   A0A0Q9XC88   B4KHL1   A0A182X4P5   A0A1I8N3X4   B7PN33   A0A182LK68   A0A182FDU9   A0A0L7R9E7   A0A1B6EAM9   A0A1W4V6M9   A0A2W1BL26   A0A0L8G521   A0A1Z5KVU7   H9JVW3   A0A232FJI8   A0A088A5Q7   V5HZ96   K7J083   B4N101   A0A023F6M6   A0A0K8W4C0   A0A0V0GB29   A0A1I8PB84   A0A1Q3FPV4   A0A034WIT6   B4M9B2   A0A1I8PQ47   A0A2A3E511   U5EQW5   B4JCS3   A0A151I4G8   A0A0J7KIH0   A0A131Z5C4   A0A151WQP9   A0A1S4EUT2   Q0C7B5   A0A195D0Q0   A0A0A1WSR5   A0A069DYI9   A0A182GUN5   B0WAN4   A0A023F8D4   A0A224XS15   A0A2P6KP25   A0A1I8MAA6   A0A2W1BSK7   Q9VQJ7   A0A0V0GCM6   B3NAN4   E1ZUW4   A0A0P5TK85   A0A2A4J5B2   A0A195FTI0   B4I2T4   B4NXB4   A0A0P5JYQ5   A0A0A9XWM0  

PDB

1Y97     E-value=5.44016e-16,     Score=204

KEGG

101738032    K10790 three prime repair exonuclease 1 [EC:3.1.11.2] | (RefSeq) uncharacterized LOC101738032

GO

GO:0003676   GO:0004527   GO:0008296   GO:0016021   GO:0008168   GO:0016758   GO:0001784   GO:0006816   GO:0005507   GO:0004713   GO:0016491   GO:0015930  

PANTHER

PTHR21210  

Length:

300

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

0.00547

Exp number, first 60 AAs:

0

Total prob of N-in:

0.03471

outside

1  -  300

 

 

Pi

189.6139

Theta

163.845642

Tajima's D

0.31816

CLR

448.145007

CSRT

0.454427278636068

Interpretation

Uncertain