SGID Silkworm Genome Informatics Database
Gene
KWMTBOMO14425  Validated by peptides from experiments
Pre Gene Modal
BGIBMGA004808
Annotation
PREDICTED:_uncharacterized_protein_LOC105395459_[Plutella_xylostella]
Location
Bomo_Chr24(+):5811684-5825459      View in EpiBrowser
Location in the cell
Nuclear   Reliability : 4.159
 

Sequence

CDS
ATGCTTCTTATTATACACAATCTACCTGCCGATACCAGTTATGCTGATGTTAAATCGCTGATACATTCAAAATGCGGGCTCACTGATGTGATTTTAGATAACCTTATGTCTCAAGACAATGCTGGTAAGAAGGTAACAGTTGGTGTTACTGATGAACATGACGCTGCTATCATTATTGGAAAAATCAACGGTATCTTCATCAATGGACATCAATTGGTCGTTGAAAACCGACAAAAGAAGCCCGTTGAACCTGTTGAATCGTTCAATGCTCCAGCAGTTCCACCACTTAGGCAACCTAAGATGTACACCAACAACACAGCAAGCTATGCAGCCCTGAATCCAGTTGTTTGTCCTCCCGCTAACCAGAATCCTGCACCCATACTTACTCAGAATCCAAATATGGGCTATGGCTTCCCGCCTTTGAACACACCAAACATGCCTTATTACATGTCGAATCAGAATCCCTATACGGGTTACGGTACGCAGCCACAACAAGCACAATCATCGTACTCATCACAGCAGGCTCCGAGATACTCGTATCAAAACCCCAATAAACAAATTTGTTCTAACATGCCGAATTATCAGTCGAACAAGTCTGATTTTCAGTCGAACACGACTGGATATCAGTCAGATAATAAAGGTTATGTGTCAAACACGGCTGATTATCAGACTAACATGTCTGGTTACCGATCTAAACCGCCTGATTATAAATCCAACAACTCTTATCAGTCTAACAACCCTTATCAGTTAAATATGCTTGGTTATCAGACAAACACTGCTGGCAATCAGTACAATGCGCCTGGTAATCAGTACAATATGCCCGGTAATCAGTATAATACACCTGGTAATCAGTACAATATGCCAGGTAATCAGCACAATACGACGAGTAAACCATACAATACGCCGGGCATTCAGTACAATACGCCGGGTAATCAGCACAATATGACGAGTAAGCCATACAATACGCCGAGCAACCAGTACAATACGCCTGGTAATCAGCATAATACGTCTGGTAATCGGTATAATACGCCTATTAATCAGTACAATAAGCTTGGTAATCAGTCAAAAACGCCTGATTATCAGTCGGACACAAAAAAACCTGATGCGGCTCATTTGCGGAAAGACGAATATGACGTTGAAGAACGAAGTTGTAATAACCATTATGACAAGTGGGATTCTGAAAATAAAATGTCCCGCAAGCGCAAATCTTCTGAAGAGCCTTCGACTTCCTTAGGGAATACGAGAAACAGTCCACAGCAACACGGAAGCGGTTCATCAAATAATTTTGGGTTGAACAATAAGCCTGGCAGTTACACAATTAATAATTCGCTCAGAGCTGGTGGTCAGTGTACGAAAAATCCGAGAGACCAAATGTTTGATACCAAAAACTCCGGATCCAGTAGTGGTTTATCAAATGTTGGTATTGGCGCCTCCCAAGGTAAAGGCCCCAGTCCTAAAAGTGGGTCTAAAAAAAGGTCTCGTAATAGACCAAAGAGACCTGATCCTAAAGATTCAGTAGCTAATAATCTTCGATCTCCGAAGCCAGGCTTTAAAAACACTGCAAGCCCCGCTCTGAAAAGGCATGCCATAGATCCGTGGCAGCACAATCATAATGAGTCCAGGCCGGCCAAACGGCCTCGGCCCCCGATACCAACGAGATACACCAAGTTCTCGAAACGTCCCGGAAAGGCCCTTAACAAATTGAAGAACGTCTTAGCGTCGGATAACAAAAAACGGAACATCGTTTCCAAATATATAGTATCCGAGATTCTGAAATCGAGTAGTAACGAACAAATAAAAGCGGGCAGGCCGTTGCAGTTGTTGCACAAGTGCATCCGCGCTCGCATCGAAGTCGCGCTCGGCTGTTACGTCAGTGTTGACCCTCCGGAAATAATGGCTCTGTACAGAACCTTTTTTCAAGAGAGGCACGATGAGCAGCTATGCGAAGCGATCGTAACTCGCGCCGCCAATGAAGATCCCGCAGAGGAAGAAAAAGCGTTACAGCCACGTTTTTATAACCCGGTTCAATTTGAAGTTTCAAGTCAAAATTACAATATTGATGAGGAAGAAGACCCTCAGGAGGATCCAAGGATAAGGTTGTTGCCCCCGTACCTCGGAGGAGATAAGAAGCAGTTCAAATTGATGAAGAAGCAAATGAACCTGGATTCGTACACGCCGTTCGAAGAGATGTTCGAGGGTAGCGACATGCCACGCCGGTTCGTCGAGGAGGAGGTCGCCGCCCTCGTCGAAGTGGTGAAGAGCGTATACCGTAATCCGACAACGGAGGCCGAAGAGATTATCTGCCGGTACTTGCACCACCAGAAGGTCGGCACGGACACGTCGGAGCTTCGCCGCCGCCGCGGGACTGGGCCCCTCGAGCACATCGAGAACACATTAAGATCGGAAGTGGCCAAGCGTCTGTTCAATATCTGCTCGAGACCAGCGGTGCGCATCATGGGCGCCGTCAACTCGACCAGGAAGCCCCTTGAGGAGTTCCTCCTGAACAAGGGCGTGGTGAGCCTGAAGAAGGCCGACCGGCAGCCGTTCTACGTGGCGCACATGGACTCGTACCGCAGCCTCGACAAGCTGCTAGAGTTCCAGAAGGTCTCCATATGCGGTCGACCCATCAAATTTATGCCGCTACACGTCACCCAGAAGCCGAAACTATCGAAGAGCTTAAGAGCGGAGCTTCAAAAAAAGCAAACACTCTCACAAACGCAGCCGAGCACCTCACAACCCGCCGCAGTCTTCAAGAAGCCAGCGGACGTAAGGAGGCCACCGCCCGGTCCCTCCAAACCGAAAAGCTCACCGAAAAAGAAATCGAAAGCTCAGACTAATGTCAATAAGGCGTCACAGAATAATGTCGCTAATGTCAATAAGGCGTCACAGAGTAATGTCGCTAATGTCAATAAGGCGTCACAGAGTAATGTCGCTAATGTCAATAAGGCGTCACAGAGTAATGTCGCAGCGGCTCGGGTCGCGATATCGCCTAATGAGACGAAAGCACAACACAACCCTCCACTAGGCACCTCCAACAATACCCTCAAAGCAGACCTGGACTCCAATATTGTTGAGAAAAATCCAACAGTAGGAGGTCAGGAGGCTCAAGGTGCCGGTAGTAAGACTGAGACGACTCCAATTAGCACTGTACAGCTTGTAGAGGGAACTACAGAAGCGAACAAAGCGCAAACTCATCCAAACACTACCGTTGTCGACGGTGAGAGCAAGGTGGTCCCCAACGACATCAGCTGTAAAGTGGAAGAGTCTCCCGTGAAGGTCAGTCCCAGCGCTGGAGACATAGAGCCTCCGATCAAAACCGAAATCAAAATTGACGACAAAACTCGTCCAAGCGTCACGGCCGAGCAGAACGAACTGGTCGCGACCCGGGACAGCGACAAGACTAAACGCGAGAGCGACTGGGACGATTATATGAATATGGAAGACGCCGACGATATCGAGGTCGACGATGACGATCTCGAAGATTACTGA
Protein
MLLIIHNLPADTSYADVKSLIHSKCGLTDVILDNLMSQDNAGKKVTVGVTDEHDAAIIIGKINGIFINGHQLVVENRQKKPVEPVESFNAPAVPPLRQPKMYTNNTASYAALNPVVCPPANQNPAPILTQNPNMGYGFPPLNTPNMPYYMSNQNPYTGYGTQPQQAQSSYSSQQAPRYSYQNPNKQICSNMPNYQSNKSDFQSNTTGYQSDNKGYVSNTADYQTNMSGYRSKPPDYKSNNSYQSNNPYQLNMLGYQTNTAGNQYNAPGNQYNMPGNQYNTPGNQYNMPGNQHNTTSKPYNTPGIQYNTPGNQHNMTSKPYNTPSNQYNTPGNQHNTSGNRYNTPINQYNKLGNQSKTPDYQSDTKKPDAAHLRKDEYDVEERSCNNHYDKWDSENKMSRKRKSSEEPSTSLGNTRNSPQQHGSGSSNNFGLNNKPGSYTINNSLRAGGQCTKNPRDQMFDTKNSGSSSGLSNVGIGASQGKGPSPKSGSKKRSRNRPKRPDPKDSVANNLRSPKPGFKNTASPALKRHAIDPWQHNHNESRPAKRPRPPIPTRYTKFSKRPGKALNKLKNVLASDNKKRNIVSKYIVSEILKSSSNEQIKAGRPLQLLHKCIRARIEVALGCYVSVDPPEIMALYRTFFQERHDEQLCEAIVTRAANEDPAEEEKALQPRFYNPVQFEVSSQNYNIDEEEDPQEDPRIRLLPPYLGGDKKQFKLMKKQMNLDSYTPFEEMFEGSDMPRRFVEEEVAALVEVVKSVYRNPTTEAEEIICRYLHHQKVGTDTSELRRRRGTGPLEHIENTLRSEVAKRLFNICSRPAVRIMGAVNSTRKPLEEFLLNKGVVSLKKADRQPFYVAHMDSYRSLDKLLEFQKVSICGRPIKFMPLHVTQKPKLSKSLRAELQKKQTLSQTQPSTSQPAAVFKKPADVRRPPPGPSKPKSSPKKKSKAQTNVNKASQNNVANVNKASQSNVANVNKASQSNVANVNKASQSNVAAARVAISPNETKAQHNPPLGTSNNTLKADLDSNIVEKNPTVGGQEAQGAGSKTETTPISTVQLVEGTTEANKAQTHPNTTVVDGESKVVPNDISCKVEESPVKVSPSAGDIEPPIKTEIKIDDKTRPSVTAEQNELVATRDSDKTKRESDWDDYMNMEDADDIEVDDDDLEDY

Summary

Uniprot
H9J5L8  
Pubmed
19121390   
EMBL
BABH01025067    BABH01025068   
Proteomes
UP000005204   
PRIDE
H9J5L8   
ProteinModelPortal
H9J5L8  
PDB
6J51     E-value=0.00174469,     Score=103

Ontologies

KEGG
101744638    no KO assigned | (RefSeq) uncharacterized LOC101744638
GO

Topology

Length:
1162
Number of predicted TMHs:
0
Exp number of AAs in TMHs:
0.0004
Exp number, first 60 AAs:
0.00012
Total prob of N-in:
0.00003
outside
1  -  1162
 
 

Population Genetic Test Statistics

Pi
172.946452
Theta
171.271757
Tajima's D
0.166069
CLR
0.298336
CSRT
0.414429278536073
Interpretation
Uncertain
Peptides ×
Source Sequence Identity Evalue
26280517 GYVIEIASGR 100.00 3e-05
28556443 AQTHPNTTVVDGESK 100.00 0.002
28556443 VNAVNPGVILTGIHLK 100.00 0.002
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