Silkworm Genome Informatics Database

Gene

KWMTBOMO14408

Pre Gene Modal

BGIBMGA000108

Annotation

PREDICTED:_uncharacterized_protein_LOC101744544_[Bombyx_mori]

Location

Bomo_Chr24(-):5504620-5508898 View in EpiBrowser

Location in the cell

Nuclear Reliability : 3.109

CDS

ATGTCAACGGGAAGCGTTAAACTACCAATCGCAACTATCAATAAAAGTTCTCTATACACTCTGCGAGGTAAAAGTGATAAAATCGGTGCTATAGATACGGATAAATGTGATCGTGCAATTAGTGAAACGGTGTTAATAAAAGACAAACCGCAGAGGACGTTGAAAGATCCAAAACACGAACCCACGTTTGATAGTTTGTCGCCGAACGTGAAAAGGATTATATCTAGTGCCACGGAGGCTAGCGCTTTGAAATTTCAAAAGAAAACAACTAACGCAGCTCGGTCATCTACAAGGCTTAGGTCTAATATACCCCTGGTCGGAGCCACTTCAAAGATTACACAATCCGGATTAGAAATATTAGATTCCGTCGAAATTTATGATCAACCTTGCCTTAATAAAGCTAAGATTGAAGAAAGTGTTAAACCCGAGACGAAAGTAGAGGCGGAGGAAACTTATGATGTCCCAATGAATAACAGACCAGCGATATACGACGTACCTTCAAACAATAAGACTGCATTCGAAACATTATCATTGCCATTTATCGACCAATCGATCGAACTCTCTATAACAACGAACGATAGAGAATTCGATATTAAATTATCATCAAAAGAAACATCTCCAATGAAATCGAATCCAAAAACTTCTACGCCGGAAGGATCACCAGCGAAAGTCCCTAAATTGTCACAAGTCGGTACCAATAGTTTGCATCGAAAAGACTTTTTAAGTCCACCGAAACAGTTGTCGGAGACTGGTCCTTATCCCGACGTTGTAGGGTCGACAGGGAATCTGAAAAGCTGTTCAGTACAAGATAAAGATGTCTCCAGGTTAAACCCTCCTGTGATTGAAGTGTGTCGACCTTTGTCTATGAGTTCAATAGCCTCCTCAAGCTCCACATCTAGCAGCGGAGTGCAGAACAAAGGAGTTAACTCAGCTTATTTGGCGTCCATAGAGAGTTTGGATGATCATAGCGACGTGGATATCACATCGGCTAATGGCAGTAACAATTATGTAAACAAAGCCGGGATTATGAATAACAGTGTCAGTGAAAGGAATTCCGATGGTAAACCTCGACAGCTGGAGGAAACGTCAGGGCTGTCGCAACTGGAACGAGTGTGTGCTGAGATCGTCCAAACAGAGAACGTCTACGTGGAAGACTTGAGGCAAGTCGTTGAGAGCTTACGCATTTGA

Protein

MSTGSVKLPIATINKSSLYTLRGKSDKIGAIDTDKCDRAISETVLIKDKPQRTLKDPKHEPTFDSLSPNVKRIISSATEASALKFQKKTTNAARSSTRLRSNIPLVGATSKITQSGLEILDSVEIYDQPCLNKAKIEESVKPETKVEAEETYDVPMNNRPAIYDVPSNNKTAFETLSLPFIDQSIELSITTNDREFDIKLSSKETSPMKSNPKTSTPEGSPAKVPKLSQVGTNSLHRKDFLSPPKQLSETGPYPDVVGSTGNLKSCSVQDKDVSRLNPPVIEVCRPLSMSSIASSSSTSSSGVQNKGVNSAYLASIESLDDHSDVDITSANGSNNYVNKAGIMNNSVSERNSDGKPRQLEETSGLSQLERVCAEIVQTENVYVEDLRQVVESLRI

Uniprot

H9IS82 A0A2H1W4J7 A0A194RJ91 A0A194QIU8 A0A0L7KMB0

Pubmed

19121390 26354079 26227816

EMBL

BABH01024099 ODYU01006291 SOQ48010.1 KQ460124 KPJ17622.1 KQ458859 + More
KPJ04855.1 JTDY01008962 KOB64260.1

Proteomes

UP000005204 UP000053240 UP000053268 UP000037510

PRIDE

H9IS82

Pfam

PF00621 RhoGEF

Interpro

IPR035899   DBL_dom_sf        + More
IPR000219   DH-domain
IPR001849   PH_domain
IPR011993   PH-like_dom_sf
IPR001331   GDS_CDC24_CS

SUPFAM

SSF48065 SSF48065

Gene 3D

1.20.900.10 2.30.29.30

CDD

cd00160 RhoGEF

ProteinModelPortal

H9IS82 A0A2H1W4J7 A0A194RJ91 A0A194QIU8 A0A0L7KMB0

KEGG

101744544 no KO assigned | (RefSeq) uncharacterized LOC101744544

GO

GO:0016021 GO:0035023 GO:0005089 GO:0035556 GO:0005509 GO:0001784 GO:0006816 GO:0005507 GO:0004713 GO:0016491 GO:0015930

Length:

395

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

0

Exp number, first 60 AAs:

0

Total prob of N-in:

0.00364

outside

1 - 395

Pi

153.492733

Theta

174.182071

Tajima's D

1.079282

CLR

0.93984

CSRT

0.678566071696415

Interpretation

Uncertain

Sequence

Summary

Ontologies

Topology

Population Genetic Test Statistics