SGID Silkworm Genome Informatics Database
Gene
KWMTBOMO14406
Pre Gene Modal
BGIBMGA000109
Annotation
PREDICTED:_uncharacterized_protein_LOC101744544_[Bombyx_mori]
Location
Bomo_Chr24(-):5454575-5465708      View in EpiBrowser
Location in the cell
Nuclear   Reliability : 4.239
 

Sequence

CDS
ATGCTGATAGCCTTGAGAGGCTATTTCAGCTTCACCCTAACGTGTAAATCGCTTTGTGAAGAGTTAAATACCTGTCGTCTGGACGCGACGTGCATCGCACGTTGCTTCGTGAACAACACCTCGGGGTTTTCCGTGTACACCTCGTACTGCACTGGCTACCCTCGGACCATGCAGCGTCTGGCGGCCCTGGCCTCGAAGCCTCAGAGCGCGAGGGAGTTCCGGGAGAGGCAGACGGCGCTCGGACATCCGCTACCGTTGGCCTCGTACTTGCTGAAGCCGGTGCAGAGGATACTGAAGTATCACTTACTTTTGCAGAACGTTGTTAAGCAATGCGCCTCCAGCGAGACGGAATACGCCTTAGTGAAGATGACCGGGATAGCGCAACACATTGACGATATGAAGAGGCGCCACGAGCACGCGGTCAGAGTGCAGGAAATCCAATCGCTTTTATACGGCTGGAGCGGACCTGATCTGACTACATACGGAGAACTGTGTGCCGAAGGGACATTTAGAGTATTCGGCGCTAAGGCGATGCGTCACGCCTTCCTCTTCGACAAGATGCTTCTCGTCACCAAGAACCGAGAGGACGGGATCTTGGCCTACAAGTCGCATATTATGTGCAACAACATGATGCTGGTGGAATCGATATCGGGGGCTCCGCTGTCGTTCCACGTGATCCCCTGGGACGCGCCGCGCTGCCAGCTCACATTGCAGGCGCGCTCCGCCCGACACAAACGCGAGTGGACACTGCTGCTCAAACGGGTGATCTTGGAGAACTACAACGCGGTGATACCTTCTCATGCCCGGCAGCTCGTTATGGAGCTGGGTCAGAACAGGACAGATGACGACATGTTGGCGGAGAAGTCGCACAACCTAATAACGCAGGCTTCGATGCGGAAGCAGCTGTCCGCGCCCGAGTATCTGGAGAAACGCAAGCTCGAACGCGAGAGGCGGAAGTGCTTCGAAAGCGGCGCGAGGGGGCGGTTGGCCAAAGCGAACAGAAAGTACACGACGCCCAGCGCCCGGAGCACCCGACCCGAGCGCTGCGACTGCACACAGATATCCAACGAGAAAGGTACGGACTACACTTGCGAGTTTTGTTACGTCGACGTGTGCACCGACTGCGAGGTGGAATTAGGCGGTAAAGACAAACGGAAAAACGACGAGAACGATTCGAACGGCGATAAGTGCTCCGATTGCGACGCGTTGCAGTCCACGGACGCCGGCAGCTCTGAGCATCTGGAGCGAAGACCCTACAAACGTACCGACTTCAATTCCTCCCAGGAGAGCTTCGTCAAAGAGAACTTGAATAAGGCCAGGGAGTATCATTCGACTAATGACATCGTCAGCTACGCGGACGCCGCCAATAGCGCTGAGGATCTCAGGAATAGCTCTTTGAGCAACATTAAGAGTATACCCAAAACGTCACTCAAATGTGAGTTAATCAAAGAGAACATTGCCGTCGACGCGTCAACTTCCTTAATACCCAGACCGTCTAGGTCTAGTGAGATCGACAAGCACAGAACGGACACGTTGAGGTCCAAATCGAAGGAAGACCCGAACAGATCTAAGCTAACCAAGATAAGCGGTTGGAGACGTAAATCCGAACCGGGTCTCCAGCAAAACACTATAAGTAACATCGCGAAGAGAACTCAGGAGGGCGACTCCGATAGAACAGAGACTAGGGGCGGCGAGAAAATCGAATTCGAATGTCGGAACTGTGGCTCGAACAAGATCACACGTAGACTGAGAGCTAATGACGGGACAATCATATCGAATCCTGAGCTGGAGCCGAAGAAACGGGGCGCGAATACAACGAAACCGAATTTAGAAATACGCATGTACAACACCAAGAACGTACCAAAGAAAATAACGAAGATCAAAAAGAACAGAGCTAAGGGGTTGCGCGTCGATACAACAGCGAGATTCTACGCGGACCTCTCCGCAGATGCGTCCACCGAGAACATTCTACACATATCAGAATCTAACGACAGCCTCAATGTTGATAAAAGTGATGATAAAACTGAACCGCCTGTAGTAACGGAGAGGCTGAGCAAAGACGAAGACATCGATGAGGAGACATACAAAAAACTAATCGAGAAAACGGATTCATTCAAAAAGAACGAACTAGAGAAAGTCAAGTATCTTAATAAACAGAAAGTCATCAACGAAAGCTCCGAAGTCGATGAGAAAACTTGTGACGAAACGAAACAAGACGTGGTGGTTGAGAGCGGCGAGGAAACGGAACAGCCCTTGGAGCAGATCATATCGCAGCTGCTGTTGCAGAATAGAGAGTTCCAGAAACTAATTAAGAAACAACAATTGAGGAACAGCGCCCAAAGGCGGCACCAAAGATTATTAAAGTCACACTCGAACCCCGAGCCGGTGGTCTTGGCGAGGCAACTGGATAACGAAGATAATAAATTCAAACTTGTCAAACAAAACTCTGAACGTAACGACACTAAAATCGACGAAGACGATGCTATAAGTCAACAAATACCCGAACCAGATCAAGTCGAAACAAAAGAAATAGAAGAGGACCACATTTACGAAACGCTAAGGATAGATAGTCGATTCGAAGATGCCTTACACAATGTAGACAACAAGAGTAAATCGATACACCACCAGCATCTGAATCGACAGAAAAGACTACCATCACCCCCGGCGCCCGTACTCCATAAAGTTGATTTTAAATCGGCCGGGTCGGATTTAGATTACGTGTACTTAACGTTCAACAAAGGTAGCACCGATGATTTTGACGGGATCTACGACGTACCAGTGAAATCTCCGCAAAAGGTCCCCGGGCTCGCTGACGAGTACTACGTGCCGATGGACAAACCCCTCAAGGCGACCAACGAAAACATTTACGACACTCTCGTCGAAGTCTGTAAACGGAAGAAGGACTTGCCGGCAGCATCGCCCGGAGACTATCTGCCTATGGGCCCCGACAGACAGAGTCCAAACACACCTGAGATATGGCTGAGTCGACAAAAGGAACATTTCAATGTGTCGCGCGACAGAAAATCCGGATCTTTACCGCGAAGCTTCCAAGTAGTTACAGGCGCACAGGAAGACAGCGATCTCGCTTCATTCAAATGCAAACCTTATACCAATAGCAAAACGTATCTTAATCGGGAAGGGAAGGTCGTTAGCATAGACAGGCCATTTACGATCGCTTCGGACCAGAGCGAAATCAGTTACGACGATGTTGAGAGCTACATGAGCGAAGGCGACATACTCAAATTCAACAAGAACGCCAAAACCGAGACTGAATATGCGCAAGACATAAGTCAATCCACTCTAGAACTGGAAGAAGAGATTGATAGATGCTATAAAAATAACTTCGAGGATATCACCTTGGACAAGACTGAGCACGATGACCCGCTCGACACATCGCAAAACAACCTCAATAACATATCGACCACTTCATCGTGTGAGGCCTTACAGTCTGAGAAGTCCAGTGAAAAGCCAACGAACACCGATCCGATACACCCGGAACACAGAATCTACAAGCCCGTTAGCAATATACTGTCTTTGAGGAATGTCTTAAGCAGATTCAAAAGCAAGACCCCGAATAAAAGCAGCAACGACGAGGACAATAACAATGACCAAAGCGTCTCAGATCCAAAAAGCCCTAGCAACGAGAAAAGATCAGCCCTAAACCCGAGAAGCTATTCGAAGAATCTGCTGCAAAGATTTAGGAGTATTATCGGCGACGAACACACAGACGACAATCAAAATAGAACCGATCCTCCAGTGACGAAACTTGCAGAGACTGTACCCACGACGACAGATGTTAAAGTCGCTATAACGACAACGATCGCCAGTGGAGCCACGTCTACCGCAGTCACCGATGTACTGAGCAAGAGCGTTTGTGAGCAGACATCGACGAGCCAAAGTCAAAACGTCAAGAACAATCTAGAAGCTCTTTCGTATAGTTGCGAAAATATACCAAGGAAGCCCGATAAATCTCGTCCTAAATTCGAAAAGAGCGTCAGCATGGTCGCCGGTAGTGTTCCGACAGCGTCGCCTTTCAAATCCAAGCACAGCTCTTATCAAAGCTTGAACAAGCTGCCCGTATACATGCAGGGCAGTAAGCACCTAGGCGCGAGAATAGCTCATTCGGACTACGTCGATCCAATGACGCTATCCGGCGACAGAAGCGCCCTCAAAAACGTCAATGTACTATTAAACAAAAACTCAGTACGACCAGACAGTCTGTTCTCTAATTCCTCATACGTGACCACGTCCAGCGACGGCATTCATCAAAGCGGCAAATCCAATTCAACGGACGTGAATCTGGACAAACCTAAAGTGCCTTACGATACCATACAGGACAATTCAGACGAATGTTTCTACGAGAAACACTTTGAGAAGATCGAACACGTGATCGACGGTGATGTGTTCAGAGATTCCGCGGTTTATTCCGACCAAGAGGAAGTAGACGAGGCCAAATCGGAACCGTGGATCAAAGACAAGAAACCGATCAACAAAATTATAACTAGAGTCGAAAGCGTGCAGAGGAAATCGTCATTACAAAGGATAAATTTAACGAAAACAGAAACTATACAAACGGTTAACAAGGATCGAAATCCCGAACAGAATTCCACGACGCCGCTTCTAATTAAACGCAAAATAGCACCCCCAGTCCCTGTTAAGCCGAAAATCACTCAAATACCGACCGCTCACCTCCAAAACAGAATTGTAACAAGAAATTTGACTATTACTAAAGAAGTGGACTTAGTCAATATTGCCAAAACTAGCTCTCATATCAGGAAACCTATCGAGAGATGTGTGTCTACGCCAGCCAAAGACATAAGCGAGGATAAACTTAAAGGAACTTCGGAAGTAGAAACAGTTCAACCGACAAACATCCAAATAAAGAGGTTGAGCTTCGAACGCGCCAGCTTAGATTCGGCGTCGCGGAAGCTTCGAACGAACGATCCAAGCTTACAGTCGGAAGCTAAAACGTCAAACAAATCGGTCTTAGAACGAAGACTCGAGATCGAACGATTGTCTAAAACACAAATGACTCCTATAAAAATACCAGTACCTCCGATACCGGCTCACAGATCTTTCGATAGAAGTATTAGTGAAAGAATGAAGAATAGAACTACAGGTGAAATAGAAAAAGACATTCCCGTTAACAAGATTAACTATGAGAGGACGGACAGCGATGACGTCAAAGGCAGCTGGGTGAAACAAGTCGTCAATAAATTCCAATAA
Protein
MLIALRGYFSFTLTCKSLCEELNTCRLDATCIARCFVNNTSGFSVYTSYCTGYPRTMQRLAALASKPQSAREFRERQTALGHPLPLASYLLKPVQRILKYHLLLQNVVKQCASSETEYALVKMTGIAQHIDDMKRRHEHAVRVQEIQSLLYGWSGPDLTTYGELCAEGTFRVFGAKAMRHAFLFDKMLLVTKNREDGILAYKSHIMCNNMMLVESISGAPLSFHVIPWDAPRCQLTLQARSARHKREWTLLLKRVILENYNAVIPSHARQLVMELGQNRTDDDMLAEKSHNLITQASMRKQLSAPEYLEKRKLERERRKCFESGARGRLAKANRKYTTPSARSTRPERCDCTQISNEKGTDYTCEFCYVDVCTDCEVELGGKDKRKNDENDSNGDKCSDCDALQSTDAGSSEHLERRPYKRTDFNSSQESFVKENLNKAREYHSTNDIVSYADAANSAEDLRNSSLSNIKSIPKTSLKCELIKENIAVDASTSLIPRPSRSSEIDKHRTDTLRSKSKEDPNRSKLTKISGWRRKSEPGLQQNTISNIAKRTQEGDSDRTETRGGEKIEFECRNCGSNKITRRLRANDGTIISNPELEPKKRGANTTKPNLEIRMYNTKNVPKKITKIKKNRAKGLRVDTTARFYADLSADASTENILHISESNDSLNVDKSDDKTEPPVVTERLSKDEDIDEETYKKLIEKTDSFKKNELEKVKYLNKQKVINESSEVDEKTCDETKQDVVVESGEETEQPLEQIISQLLLQNREFQKLIKKQQLRNSAQRRHQRLLKSHSNPEPVVLARQLDNEDNKFKLVKQNSERNDTKIDEDDAISQQIPEPDQVETKEIEEDHIYETLRIDSRFEDALHNVDNKSKSIHHQHLNRQKRLPSPPAPVLHKVDFKSAGSDLDYVYLTFNKGSTDDFDGIYDVPVKSPQKVPGLADEYYVPMDKPLKATNENIYDTLVEVCKRKKDLPAASPGDYLPMGPDRQSPNTPEIWLSRQKEHFNVSRDRKSGSLPRSFQVVTGAQEDSDLASFKCKPYTNSKTYLNREGKVVSIDRPFTIASDQSEISYDDVESYMSEGDILKFNKNAKTETEYAQDISQSTLELEEEIDRCYKNNFEDITLDKTEHDDPLDTSQNNLNNISTTSSCEALQSEKSSEKPTNTDPIHPEHRIYKPVSNILSLRNVLSRFKSKTPNKSSNDEDNNNDQSVSDPKSPSNEKRSALNPRSYSKNLLQRFRSIIGDEHTDDNQNRTDPPVTKLAETVPTTTDVKVAITTTIASGATSTAVTDVLSKSVCEQTSTSQSQNVKNNLEALSYSCENIPRKPDKSRPKFEKSVSMVAGSVPTASPFKSKHSSYQSLNKLPVYMQGSKHLGARIAHSDYVDPMTLSGDRSALKNVNVLLNKNSVRPDSLFSNSSYVTTSSDGIHQSGKSNSTDVNLDKPKVPYDTIQDNSDECFYEKHFEKIEHVIDGDVFRDSAVYSDQEEVDEAKSEPWIKDKKPINKIITRVESVQRKSSLQRINLTKTETIQTVNKDRNPEQNSTTPLLIKRKIAPPVPVKPKITQIPTAHLQNRIVTRNLTITKEVDLVNIAKTSSHIRKPIERCVSTPAKDISEDKLKGTSEVETVQPTNIQIKRLSFERASLDSASRKLRTNDPSLQSEAKTSNKSVLERRLEIERLSKTQMTPIKIPVPPIPAHRSFDRSISERMKNRTTGEIEKDIPVNKINYERTDSDDVKGSWVKQVVNKFQ

Summary

Uniprot
H9IS83   A0A2H1V035   A0A194QIU8   A0A194RJ91   A0A0L7KSS6   A0A212FHQ1   + More
Pubmed
19121390    26354079    26227816    22118469   
EMBL
BABH01024091    BABH01024092    ODYU01000062    SOQ34191.1    KQ458859    KPJ04855.1    + More
KQ460124    KPJ17622.1    JTDY01006314    KOB66116.1    AGBW02008471    OWR53270.1   
Proteomes
UP000005204    UP000053268    UP000053240    UP000037510    UP000007151   
PRIDE
H9IS83   
Pfam
PF00621   RhoGEF
Interpro
IPR011993   PH-like_dom_sf        + More
IPR000219   DH-domain       
IPR035899   DBL_dom_sf       
IPR001849   PH_domain       
IPR001331   GDS_CDC24_CS       
SUPFAM
SSF48065   SSF48065       
Gene 3D
1.20.900.10     2.30.29.30    
CDD
cd00160  RhoGEF
ProteinModelPortal
H9IS83   A0A2H1V035   A0A194QIU8   A0A194RJ91   A0A0L7KSS6   A0A212FHQ1   + More
PDB
1KZG     E-value=1.98666e-14,     Score=199

Ontologies

KEGG
101744544    no KO assigned | (RefSeq) uncharacterized LOC101744544
GO
GO:0005089   GO:0035023   GO:0035556   GO:0005509   GO:0001784   GO:0006816   GO:0016021   GO:0005507   GO:0004713   GO:0016491   GO:0015930  

Topology

Length:
1741
Number of predicted TMHs:
0
Exp number of AAs in TMHs:
0.0261
Exp number, first 60 AAs:
0.02358
Total prob of N-in:
0.00125
outside
1  -  1741
 
 

Population Genetic Test Statistics

Pi
183.260994
Theta
158.15254
Tajima's D
1.048885
CLR
1.609439
CSRT
0.674466276686166
Interpretation
Uncertain
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