Gene

KWMTBOMO14405

Pre Gene Modal

BGIBMGA000110

Annotation

PREDICTED:_serologically_defined_colon_cancer_antigen_8_homolog_[Bombyx_mori]

Location

Bomo_Chr24(-):5438910-5444628      View in EpiBrowser

Location in the cell

Nuclear   Reliability : 3.634

CDS

ATGAATGATTATGGATTGAAACGGATCCCGGATTATACGGAGCTGGCTTACAAGGAGGCTGTTTCGAAGCTGAGATACTTCTTATCGGGAAACTACGCGCCTTCTGCTCGCAGTTACGGAGGTTCTGCTTCGATAAAGAATCTCGACGAATCCGATGGGGATCTGGACAAGAAATATTCTAGTTCGTACAACGCCGTCGGCGACTTCAAGCCGAAGCCGAGACTTACCGCCAAGTATGCCACTCTTTATGCCGACAGCTTGAAGAACTACACGCCCGAACCTGTCAATGTTCCTACGTCGGCTGGGGCTGGAGATTCGTCGACCGCGAACCCTGACGTCATCAATTTCATACATAAACAGGAAGAGTACATCGAGCAATTAGAAAGGGAGAGTCAGTATTGCAGGGACGAATTGAACAATCTACTCGGTAAAGTGAAGGAAGTGATCTCGGAGAACGAGCATCTGCACGAAGCCCAGAAGAACAAGTTGATTTCTAGAATGTTCCATTCGTACAATGGCTCCGAAACTGATGACGTCGACGACAGCACCGGTCTCGACAGTGACAATAAGACAAGCCCATCGAAAGCTCGGAAGACGTCTAAAGCCCGTGGTACGAGACTTGAAGGTCCCAACATCGTCTTCGAGTCCCGCATCGCAGAACTGGAAGCTCAACTAACTCAGTCCAAGATCGACTTGAAGAAGCTGCAGTAG

Protein

MNDYGLKRIPDYTELAYKEAVSKLRYFLSGNYAPSARSYGGSASIKNLDESDGDLDKKYSSSYNAVGDFKPKPRLTAKYATLYADSLKNYTPEPVNVPTSAGAGDSSTANPDVINFIHKQEEYIEQLERESQYCRDELNNLLGKVKEVISENEHLHEAQKNKLISRMFHSYNGSETDDVDDSTGLDSDNKTSPSKARKTSKARGTRLEGPNIVFESRIAELEAQLTQSKIDLKKLQ

Similarity

Belongs to the globin family.

Uniprot

H9IS84   A0A212FHQ5   A0A3S2NPB7   A0A194QMZ5   A0A194RIH2   A0A067R4F6   + More
A0A2P8XQS2   A0A2J7QB01   A0A2J7QB19   A0A2J7QB13   U4UA84   N6UDW2   A0A139WKJ6   A0A139WKF1   A0A1B6G9V6   A0A1B6K4K1   A0A1B6HIJ2   A0A1B6IYN6   A0A1B6JUF6   A0A1B6I2N6   E2BGG7   E0VEZ1   A0A195CN41   A0A151X116   A0A154PGG3   F4WKT9   A0A026WX91   E2AJ52   A0A151JVJ3   A0A0L7KVU7   A0A195BJH8   A0A3L8D8L1   A0A158P3Y4   A0A151J8U2   B4LX92   A0A0P9ASD2   B3P3X1   B4K5Q4   A0A0B4LIA2   B3M393   A0A0P8Y0L7   B4HLG5   A0A0B4LHH2   A0A0B4LH69   B4QXT1   Q6NR11   A0A0B4LHA1   Q9VF13   Q9VF12   A0A0R1E385   B4NBA2   A0A1W4VHW4   A0A0R1E3A2   A0A1W4VV37   B4PRI8   A0A0R1E955   A0A182LUM2   A0A1W4VV49   A0A1W4VHL7   A0A1W4VUF0   A0A182S8N7   A0A182PD93   A0A182Y9N1   B0XDC5   A0A182Q2P5   W5JM21   A0A182UME1   K7IS84   A0A1A9YK43   A0A084WNK5   A0A182I5Y6   A0A1B6CCP4   A0A182WE48   B4JT52   A0A2Y9D2E5   A0A232EKF4   A0A182UI48   A0A1B0BBW3   Q16JS9   A0A182RW78   U5EUK6   A0A182IKQ7   A0A182HD36   A0A1S4FYJ5   A0A1B0F0M4   A0A1A9ZTD0   A0A1B0CL97   A0A1D2N2K2   A0A182FVG3   A0A1I8M229   A0A1B0G6S0   A0A182JX89   A0A1A9UTN1   A0A0R3NI68   I5APA4   A0A0R3NI69   A0A0R3NNV7   B4GEV6  

Pubmed

19121390    22118469    26354079    24845553    29403074    23537049    + More
18362917    19820115    20798317    20566863    21719571    24508170    26227816    30249741    21347285    17994087    10731132    12537568    12537572    12537573    12537574    16110336    17569856    17569867    26109357    26109356    17550304    25244985    20920257    23761445    20075255    24438588    28648823    17510324    26483478    27289101    25315136    15632085   

EMBL

BABH01024086    BABH01024087    BABH01024088    BABH01024089    AGBW02008471    OWR53269.1    + More
RSAL01000179    RVE44965.1    KQ458859    KPJ04856.1    KQ460124    KPJ17623.1    KK852984    KDR12857.1    PYGN01001512    PSN34350.1    NEVH01016304    PNF25778.1    PNF25780.1    PNF25776.1    KB632195    ERL89952.1    APGK01026643    KB740635    ENN79895.1    KQ971326    KYB28460.1    KYB28459.1    GECZ01010555    JAS59214.1    GECU01001339    JAT06368.1    GECU01033331    JAS74375.1    GECU01015690    JAS92016.1    GECU01004861    JAT02846.1    GECU01026546    JAS81160.1    GL448181    EFN85216.1    DS235100    EEB11965.1    KQ977513    KYN02166.1    KQ982612    KYQ53869.1    KQ434899    KZC10941.1    GL888206    EGI65181.1    KK107078    EZA60458.1    GL439967    EFN66492.1    KQ981701    KYN37496.1    JTDY01005066    KOB67407.1    KQ976453    KYM85341.1    QOIP01000011    RLU16626.1    ADTU01008610    KQ979480    KYN21282.1    CH940650    EDW66744.2    CH902617    KPU80313.1    CH954181    EDV49077.1    CH933806    EDW15116.2    AE014297    AHN57347.1    EDV43554.1    KPU80312.1    CH480815    EDW41985.1    AHN57345.1    AHN57343.1    AHN57344.1    CM000364    EDX12755.1    BT010273    AAQ23591.1    ABW08684.1    AHN57346.1    AAF55249.2    AAF55250.2    CM000160    KRK03718.1    CH964232    EDW81066.2    KRK03720.1    EDW97388.2    KRK03719.1    AXCM01004280    DS232752    EDS45403.1    AXCN02001080    ADMH02001177    ETN63829.1    ATLV01024620    KE525353    KFB51799.1    APCN01003537    GEDC01026072    JAS11226.1    CH916373    EDV94942.1    NNAY01003801    OXU18839.1    JXJN01011710    JXJN01011711    CH477994    EAT34532.1    GANO01003837    JAB56034.1    JXUM01034368    JXUM01034369    JXUM01034370    KQ561021    KXJ79997.1    AJVK01007785    AJWK01017052    AJWK01017053    AJWK01017054    LJIJ01000274    ODM99517.1    CCAG010013864    CM000070    KRT00706.1    EIM52789.2    KRT00705.1    KRT00707.1    CH479182    EDW34141.1   

Proteomes

UP000005204    UP000007151    UP000283053    UP000053268    UP000053240    UP000027135    + More
UP000245037    UP000235965    UP000030742    UP000019118    UP000007266    UP000008237    UP000009046    UP000078542    UP000075809    UP000076502    UP000007755    UP000053097    UP000000311    UP000078541    UP000037510    UP000078540    UP000279307    UP000005205    UP000078492    UP000008792    UP000007801    UP000008711    UP000009192    UP000000803    UP000001292    UP000000304    UP000002282    UP000007798    UP000192221    UP000075883    UP000075901    UP000075885    UP000076408    UP000002320    UP000075886    UP000000673    UP000075903    UP000002358    UP000092443    UP000030765    UP000075840    UP000075920    UP000001070    UP000215335    UP000075902    UP000092460    UP000008820    UP000075900    UP000075880    UP000069940    UP000249989    UP000092462    UP000092445    UP000092461    UP000094527    UP000069272    UP000095301    UP000092444    UP000075881    UP000078200    UP000001819    UP000008744   

PRIDE

H9IS84    Q6NR11    Q9VF13    Q9VF12   

Pfam

PF15964   CCCAP        + More
PF15393   DUF4615
PF10441   Urb2
PF00042   Globin

Interpro

IPR031887   SDCCAG8        + More
IPR029274   DUF4615       
IPR018849   Urb2/Npa2_C       
IPR012292   Globin/Proto       
IPR000971   Globin       
IPR009050   Globin-like_sf       

SUPFAM

SSF46458   SSF46458       

Gene 3D

1.10.490.10    

ProteinModelPortal

H9IS84   A0A212FHQ5   A0A3S2NPB7   A0A194QMZ5   A0A194RIH2   A0A067R4F6   + More
A0A2P8XQS2   A0A2J7QB01   A0A2J7QB19   A0A2J7QB13   U4UA84   N6UDW2   A0A139WKJ6   A0A139WKF1   A0A1B6G9V6   A0A1B6K4K1   A0A1B6HIJ2   A0A1B6IYN6   A0A1B6JUF6   A0A1B6I2N6   E2BGG7   E0VEZ1   A0A195CN41   A0A151X116   A0A154PGG3   F4WKT9   A0A026WX91   E2AJ52   A0A151JVJ3   A0A0L7KVU7   A0A195BJH8   A0A3L8D8L1   A0A158P3Y4   A0A151J8U2   B4LX92   A0A0P9ASD2   B3P3X1   B4K5Q4   A0A0B4LIA2   B3M393   A0A0P8Y0L7   B4HLG5   A0A0B4LHH2   A0A0B4LH69   B4QXT1   Q6NR11   A0A0B4LHA1   Q9VF13   Q9VF12   A0A0R1E385   B4NBA2   A0A1W4VHW4   A0A0R1E3A2   A0A1W4VV37   B4PRI8   A0A0R1E955   A0A182LUM2   A0A1W4VV49   A0A1W4VHL7   A0A1W4VUF0   A0A182S8N7   A0A182PD93   A0A182Y9N1   B0XDC5   A0A182Q2P5   W5JM21   A0A182UME1   K7IS84   A0A1A9YK43   A0A084WNK5   A0A182I5Y6   A0A1B6CCP4   A0A182WE48   B4JT52   A0A2Y9D2E5   A0A232EKF4   A0A182UI48   A0A1B0BBW3   Q16JS9   A0A182RW78   U5EUK6   A0A182IKQ7   A0A182HD36   A0A1S4FYJ5   A0A1B0F0M4   A0A1A9ZTD0   A0A1B0CL97   A0A1D2N2K2   A0A182FVG3   A0A1I8M229   A0A1B0G6S0   A0A182JX89   A0A1A9UTN1   A0A0R3NI68   I5APA4   A0A0R3NI69   A0A0R3NNV7   B4GEV6  

KEGG

101744396    K16488 serologically defined colon cancer antigen 8 | (RefSeq) serologically defined colon cancer an

GO

GO:0005813   GO:0007098   GO:0005814   GO:0031023   GO:0001764   GO:0030010   GO:0035148   GO:0016787   GO:0046872   GO:0020037   GO:0005344   GO:0019825   GO:0051297   GO:0005509   GO:0001784   GO:0006816   GO:0016021   GO:0005507   GO:0004713   GO:0016491   GO:0015930  

PANTHER

PTHR34343  

Length:

236

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

0.0005

Exp number, first 60 AAs:

0.0005

Total prob of N-in:

0.07934

outside

1  -  236

 

 

Pi

315.736384

Theta

169.705303

Tajima's D

3.291474

CLR

0.172201

CSRT

0.988950552472376

Interpretation

Uncertain