Gene

KWMTBOMO14404

Pre Gene Modal

BGIBMGA000110

Annotation

PREDICTED:_serologically_defined_colon_cancer_antigen_8_homolog_isoform_X2_[Papilio_xuthus]

Location

Bomo_Chr24(-):5430319-5433208      View in EpiBrowser

Location in the cell

Nuclear   Reliability : 3.715

CDS

ATGCCATCACATAATGCAAAAGCTCAAAAGCTTGACTTGGACCGTCAGCGGCGCGAGGAGAACGATCTCAAACGAGAACTGACCTTGAAGAACTCCGCCGTTGAGGAACTGAAGATGGAACTCAAGAATAAAACTGCATCTCTCCAGGCTGATCTGTCTCAGGCTCACGCCGAGAAGGCTTCATTGGAGGAGGAGCTGGCAAGCGCGCGGCTGGCCTTAGAGCGACACCAGCGCCAGACCAAACACGAAACTAATCGACTTAATTCAGAGATCCAGTCCCTTCGTCAGCGTCTGGACCGAGCTGACGCGGACCTGGTACACTCGCGCCGCGAGAACCTGCGTCTCTCTGAGCAGATCTCCAATCTCGAAAAAGAGATTAACTTGAAGAGCTTGAGCCCGATCTCTTCAGAGAAGAACAAGAAGGAAAAGGAGCTGTCTACCATGCTGGAGTCCATTGACAACAAGCACGGTGCGTACACCAGCACCACTATACAGACGTAG

Protein

MPSHNAKAQKLDLDRQRREENDLKRELTLKNSAVEELKMELKNKTASLQADLSQAHAEKASLEEELASARLALERHQRQTKHETNRLNSEIQSLRQRLDRADADLVHSRRENLRLSEQISNLEKEINLKSLSPISSEKNKKEKELSTMLESIDNKHGAYTSTTIQT

Uniprot

A0A3S2NPB7   A0A194RIH2   A0A212FHQ5   A0A2H1WXQ4   A0A194QMZ5   A0A0N1IIF3   + More
Q16JS9   A0A182HD36   U4UA84   N6UDW2   W5JM21   A0A1S4FYJ5   B0XDC5   A0A1B0F0M4   A0A182Q2P5   A0A1B0CL97   A0A182PD93   A0A084WNK5   A0A182KV38   A0A182RW78   A0A182WE48   A0A182LUM2   A0A182Y9N1   A0A182WXW5   A0A182I5Y6   A0A182UME1   A0A2Y9D2E5   U5EUK6   A0A182FVG3   A0A182IKQ7   A0A182JX89   A0A182UI48   A0A182S8N7   A0A182N2N5   A0A1B6DK32   A0A0L0CEB9   A0A067R4F6   F4WKT9   A0A2J7QB27   A0A1W4VHW4   A0A139WKF1   A0A139WKJ6   A0A1W4VHL7   A0A1W4VUF0   A0A1W4VV37   A0A1W4VV49   A0A1I8PNM9   A0A1I8PNQ2   A0A2J7QB13   E2AJ52   A0A151JVJ3   A0A195CN41   A0A195BJH8   A0A1I8PNQ7   A0A1I8PNT3   A0A158P3Y4   A0A1I8PNS8   A0A1I8PNN4   A0A0R1E385   A0A0R1E955   Q6NR11   E2BGG7   A0A146L9C7   A0A0B4LIA2   B4PRI8   A0A0K8SIA7   A0A0R1E3A2   A0A0P8Y0L7   B4JT52   A0A0P9ASD2   A0A0A9WSU1   A0A0B4LHH2   Q9VF13   A0A0J7KDD2   Q9VF12   A0A0A9WU78   B3M393   A0A0B4LH69   A0A2J7QB19   A0A0B4LHA1   A0A1J1ISH3   B3P3X1   B4NBA2   A0A151X116   A0A1I8M229   B4QXT1   B4K5Q4   B4HLG5   A0A026WX91   A0A151J8U2   A0A0K8T5B5   A0A3L8D8L1   A0A0A9WA39   A0A146L8Z3   B4LX92   A0A0A9WIE3   A0A2P8XQS2   A0A1B6JHP8  

Pubmed

26354079    22118469    17510324    26483478    23537049    20920257    + More
23761445    24438588    20966253    25244985    26108605    24845553    21719571    18362917    19820115    20798317    21347285    17994087    17550304    10731132    12537568    12537572    12537573    12537574    16110336    17569856    17569867    26109357    26109356    26823975    25401762    25315136    24508170    30249741    29403074   

EMBL

RSAL01000179    RVE44965.1    KQ460124    KPJ17623.1    AGBW02008471    OWR53269.1    + More
ODYU01011436    SOQ57174.1    KQ458859    KPJ04856.1    LADJ01066008    KPJ21679.1    CH477994    EAT34532.1    JXUM01034368    JXUM01034369    JXUM01034370    KQ561021    KXJ79997.1    KB632195    ERL89952.1    APGK01026643    KB740635    ENN79895.1    ADMH02001177    ETN63829.1    DS232752    EDS45403.1    AJVK01007785    AXCN02001080    AJWK01017052    AJWK01017053    AJWK01017054    ATLV01024620    KE525353    KFB51799.1    AXCM01004280    APCN01003537    GANO01003837    JAB56034.1    GEDC01011244    JAS26054.1    JRES01000623    KNC29824.1    KK852984    KDR12857.1    GL888206    EGI65181.1    NEVH01016304    PNF25779.1    KQ971326    KYB28459.1    KYB28460.1    PNF25776.1    GL439967    EFN66492.1    KQ981701    KYN37496.1    KQ977513    KYN02166.1    KQ976453    KYM85341.1    ADTU01008610    CM000160    KRK03718.1    KRK03719.1    BT010273    AE014297    AAQ23591.1    ABW08684.1    GL448181    EFN85216.1    GDHC01014300    JAQ04329.1    AHN57347.1    EDW97388.2    GBRD01012815    JAG53011.1    KRK03720.1    CH902617    KPU80312.1    CH916373    EDV94942.1    KPU80313.1    GBHO01035684    JAG07920.1    AHN57345.1    AAF55249.2    LBMM01009012    KMQ88463.1    AAF55250.2    GBHO01032280    JAG11324.1    EDV43554.1    AHN57343.1    AHN57344.1    PNF25780.1    AHN57346.1    CVRI01000059    CRL03187.1    CH954181    EDV49077.1    CH964232    EDW81066.2    KQ982612    KYQ53869.1    CM000364    EDX12755.1    CH933806    EDW15116.2    CH480815    EDW41985.1    KK107078    EZA60458.1    KQ979480    KYN21282.1    GBRD01005099    JAG60722.1    QOIP01000011    RLU16626.1    GBHO01038995    JAG04609.1    GDHC01014554    JAQ04075.1    CH940650    EDW66744.2    GBHO01039009    JAG04595.1    PYGN01001512    PSN34350.1    GECU01008998    JAS98708.1   

Proteomes

UP000283053    UP000053240    UP000007151    UP000053268    UP000008820    UP000069940    + More
UP000249989    UP000030742    UP000019118    UP000000673    UP000002320    UP000092462    UP000075886    UP000092461    UP000075885    UP000030765    UP000075882    UP000075900    UP000075920    UP000075883    UP000076408    UP000076407    UP000075840    UP000075903    UP000069272    UP000075880    UP000075881    UP000075902    UP000075901    UP000075884    UP000037069    UP000027135    UP000007755    UP000235965    UP000192221    UP000007266    UP000095300    UP000000311    UP000078541    UP000078542    UP000078540    UP000005205    UP000002282    UP000000803    UP000008237    UP000007801    UP000001070    UP000036403    UP000183832    UP000008711    UP000007798    UP000075809    UP000095301    UP000000304    UP000009192    UP000001292    UP000053097    UP000078492    UP000279307    UP000008792    UP000245037   

PRIDE

Q6NR11    Q9VF13    Q9VF12   

Pfam

PF15964   CCCAP        + More
PF15393   DUF4615

Interpro

IPR031887   SDCCAG8        + More
IPR029274   DUF4615       

ProteinModelPortal

A0A3S2NPB7   A0A194RIH2   A0A212FHQ5   A0A2H1WXQ4   A0A194QMZ5   A0A0N1IIF3   + More
Q16JS9   A0A182HD36   U4UA84   N6UDW2   W5JM21   A0A1S4FYJ5   B0XDC5   A0A1B0F0M4   A0A182Q2P5   A0A1B0CL97   A0A182PD93   A0A084WNK5   A0A182KV38   A0A182RW78   A0A182WE48   A0A182LUM2   A0A182Y9N1   A0A182WXW5   A0A182I5Y6   A0A182UME1   A0A2Y9D2E5   U5EUK6   A0A182FVG3   A0A182IKQ7   A0A182JX89   A0A182UI48   A0A182S8N7   A0A182N2N5   A0A1B6DK32   A0A0L0CEB9   A0A067R4F6   F4WKT9   A0A2J7QB27   A0A1W4VHW4   A0A139WKF1   A0A139WKJ6   A0A1W4VHL7   A0A1W4VUF0   A0A1W4VV37   A0A1W4VV49   A0A1I8PNM9   A0A1I8PNQ2   A0A2J7QB13   E2AJ52   A0A151JVJ3   A0A195CN41   A0A195BJH8   A0A1I8PNQ7   A0A1I8PNT3   A0A158P3Y4   A0A1I8PNS8   A0A1I8PNN4   A0A0R1E385   A0A0R1E955   Q6NR11   E2BGG7   A0A146L9C7   A0A0B4LIA2   B4PRI8   A0A0K8SIA7   A0A0R1E3A2   A0A0P8Y0L7   B4JT52   A0A0P9ASD2   A0A0A9WSU1   A0A0B4LHH2   Q9VF13   A0A0J7KDD2   Q9VF12   A0A0A9WU78   B3M393   A0A0B4LH69   A0A2J7QB19   A0A0B4LHA1   A0A1J1ISH3   B3P3X1   B4NBA2   A0A151X116   A0A1I8M229   B4QXT1   B4K5Q4   B4HLG5   A0A026WX91   A0A151J8U2   A0A0K8T5B5   A0A3L8D8L1   A0A0A9WA39   A0A146L8Z3   B4LX92   A0A0A9WIE3   A0A2P8XQS2   A0A1B6JHP8  

KEGG

101744396    K16488 serologically defined colon cancer antigen 8 | (RefSeq) serologically defined colon cancer an

GO

GO:0005813   GO:0007098   GO:0005814   GO:0031023   GO:0001764   GO:0030010   GO:0035148   GO:0016787  

PANTHER

PTHR34343  

Length:

166

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

0

Exp number, first 60 AAs:

0

Total prob of N-in:

0.33408

outside

1  -  166

 

 

Pi

328.710382

Theta

157.233654

Tajima's D

3.071581

CLR

1.737433

CSRT

0.981900904954752

Interpretation

Uncertain