Gene

KWMTBOMO14401

Pre Gene Modal

BGIBMGA000112

Annotation

PREDICTED:_cysteine-rich_PDZ-binding_protein_[Amyelois_transitella]

Location

Bomo_Chr24(-):5419831-5421908      View in EpiBrowser

Location in the cell

Cytoplasmic   Reliability : 1.11 Extracellular   Reliability : 1.135 Nuclear   Reliability : 1.624

CDS

ATGGTTTGTGAGAAGTGCGAAAAGAAATTGGGCAGAGTAATAACGCCGGACCCTTGGAAGGCTGGAGCTAGGAATACCGTGGAGTCCGGCGGACGTGTTGTTGGAGAAAACAAAGCATTAACCGCCAAAAAAGGACGATTTAATCCGTACACTTCCACATTTCAACAGTGCAAAATCTGCAGAACGAAAGTACACCAGGTCGGATCACATTACTGCCAAGCTTGTGCATACAAAAAGGGTATATGTGCCATGTGTGGAAAGAAGATTCTAGACACTAAGAATTACAGACAGAGCTCAACTTAG

Protein

MVCEKCEKKLGRVITPDPWKAGARNTVESGGRVVGENKALTAKKGRFNPYTSTFQQCKICRTKVHQVGSHYCQACAYKKGICAMCGKKILDTKNYRQSST

Uniprot

H9IS86   A0A3S2LVM2   A0A1E1W9V4   S4PPF1   A0A212FHS4   A0A194RNN3   + More
A0A194QH38   D6WGS0   A0A2R7WDI3   A0A310S460   A0A0L7QW81   A0A1B6MS06   A0A1B6GZC1   A0A1B6JAT8   A0A0M9ADR1   A0A2A3E1A9   A0A087ZS03   A0A154P6V7   A0A0T6AY19   A0A0A9XC14   A0A2J7REA8   A0A224XQU5   A0A0V0GBE6   A0A069DNQ4   A0A0J7NUU3   A0A1S3DCH6   A0A2P8ZJN6   A0A232F5P1   K7IYA2   A0A151X3T4   A0A195CZU2   E9IGP0   A0A026W9B3   A0A2C9LMJ6   F4WQT3   A0A195ESP5   A0A158NRS5   E2BHQ2   A0A1B6CXG0   A0A1D2NN15   A0A131Z815   A0A0P4VLW9   R4FLU0   G3MN62   A0A0B6Y717   A0A224Z3X1   A0A1E1XU94   A0A0C9S027   A0A023FEV2   A0A023FW37   A0A0K8RKY8   B7QN05   E2AX55   J3JXN1   R7VLU5   A0A2L2YKM5   K7IXX2   A0A1Y1M663   A0A0L8GZK2   A0A182PD97   A0A182V5L3   A0A182JX94   A0A182WXW0   A0A182I5Y1   A0A182MAA9   A0A1B0GJ20   A0A182WE46   Q7QE02   A0A1S3HZB9   A0A182Y9M6   A0A182RW74   E9GRR6   A0A023EE87   Q16JS4   A0A182FVG5   A0A2M4CYF1   A0A2M4CY91   A0A3B5PRK2   A0A3B5LAL0   A0A084WNL1   A0A182IVF0   A0A3B3YGJ0   A0A087XVV8   A0A3B3V3B2   A0A0S7HY48   A0A1L8E509   A0A3Q1EBE6   A0A3B5B421   A0A3Q1CR79   A0A3P8U374   A0A2P2I5S2   A0A3P9ND08   A0A146Y7H0   A0A1A8PMB1   A0A1A8LV58   A0A1A8JRD3   A0A1A8BBY0   A0A1A8V7U1   A0A146MK50   A0A3R7MBR7  

Pubmed

19121390    23622113    22118469    26354079    18362917    19820115    + More
25401762    26823975    26334808    29403074    28648823    20075255    21282665    24508170    30249741    15562597    21719571    21347285    20798317    27289101    26830274    27129103    22216098    28797301    29209593    26131772    22516182    23537049    23254933    26561354    28004739    12364791    14747013    17210077    25244985    21292972    24945155    17510324    23542700    24438588   

EMBL

BABH01024086    RSAL01000179    RVE44964.1    GDQN01007266    GDQN01005854    JAT83788.1    + More
JAT85200.1    GAIX01000287    JAA92273.1    AGBW02008471    OWR53267.1    KQ460124    KPJ17626.1    KQ458859    KPJ04858.1    KQ971327    EEZ99622.1    KK854658    PTY17696.1    KQ784160    OAD51865.1    KQ414716    KOC62840.1    GEBQ01001279    JAT38698.1    GECZ01001998    JAS67771.1    GECU01011376    JAS96330.1    KQ435692    KOX81059.1    KZ288453    PBC25533.1    KQ434827    KZC07581.1    LJIG01022593    KRT79749.1    GBHO01027236    GBRD01017066    GDHC01010645    GDHC01004678    JAG16368.1    JAG48761.1    JAQ07984.1    JAQ13951.1    NEVH01005277    PNF39165.1    GFTR01001550    JAW14876.1    GECL01000805    JAP05319.1    GBGD01003598    JAC85291.1    LBMM01001515    KMQ96160.1    PYGN01000035    PSN56714.1    NNAY01000875    OXU26111.1    KQ982562    KYQ54924.1    KQ977041    KYN06127.1    GL763054    EFZ20229.1    KK107347    QOIP01000007    EZA52261.1    RLU20875.1    GL888275    EGI63446.1    KQ981993    KYN30904.1    ADTU01024289    GL448322    EFN84800.1    GEDC01019138    JAS18160.1    LJIJ01000001    ODN06673.1    GEDV01001459    JAP87098.1    GDKW01001109    JAI55486.1    ACPB03004735    GAHY01001253    JAA76257.1    JO843313    AEO34930.1    HACG01005267    CEK52132.1    GFPF01009788    MAA20934.1    GFAA01000592    JAU02843.1    GBZX01002831    JAG89909.1    GBBK01004430    JAC20052.1    GBBL01002390    JAC24930.1    GADI01002609    JAA71199.1    ABJB010114878    DS974685    EEC20227.1    GL443520    EFN62005.1    APGK01042609    BT128001    KB741007    KB632182    AEE62963.1    ENN75611.1    ERL89618.1    AMQN01003920    KB292234    ELU17920.1    IAAA01029724    LAA08663.1    GEZM01039532    JAV81339.1    KQ419780    KOF82393.1    APCN01003537    AXCM01001811    AJWK01019214    AAAB01008848    EAA07057.4    GL732560    EFX77867.1    GAPW01006457    JAC07141.1    CH477994    EAT34537.1    GGFL01006121    MBW70299.1    GGFL01006122    MBW70300.1    ATLV01024620    KE525353    KFB51805.1    AYCK01009265    GBYX01435480    GBYX01435479    JAO45855.1    GFDF01000273    JAV13811.1    IACF01003762    LAB69372.1    GCES01036245    JAR50078.1    HAEH01006816    HAEI01002916    SBR82396.1    HAEF01009288    HAEG01004816    SBR48211.1    HAED01016804    HAEE01002643    SBR22663.1    HADZ01001126    HAEA01016526    SBP65067.1    HADY01003527    HAEJ01015998    SBS56455.1    GCES01166241    JAQ20081.1    QCYY01001511    ROT77561.1   

Proteomes

UP000005204    UP000283053    UP000007151    UP000053240    UP000053268    UP000007266    + More
UP000053825    UP000053105    UP000242457    UP000005203    UP000076502    UP000235965    UP000036403    UP000079169    UP000245037    UP000215335    UP000002358    UP000075809    UP000078542    UP000053097    UP000279307    UP000076420    UP000007755    UP000078541    UP000005205    UP000008237    UP000094527    UP000015103    UP000001555    UP000000311    UP000019118    UP000030742    UP000014760    UP000053454    UP000075885    UP000075903    UP000075881    UP000076407    UP000075840    UP000075883    UP000092461    UP000075920    UP000007062    UP000085678    UP000076408    UP000075900    UP000000305    UP000008820    UP000069272    UP000002852    UP000261380    UP000030765    UP000075880    UP000261480    UP000028760    UP000261500    UP000257200    UP000261400    UP000257160    UP000265080    UP000242638    UP000265000    UP000283509   

PRIDE

H9IS86   

Pfam

PF10235   Cript        + More
PF02373   JmjC

Interpro

IPR019367   PDZ-binding_CRIPT        + More
IPR003347   JmjC_dom       

ProteinModelPortal

H9IS86   A0A3S2LVM2   A0A1E1W9V4   S4PPF1   A0A212FHS4   A0A194RNN3   + More
A0A194QH38   D6WGS0   A0A2R7WDI3   A0A310S460   A0A0L7QW81   A0A1B6MS06   A0A1B6GZC1   A0A1B6JAT8   A0A0M9ADR1   A0A2A3E1A9   A0A087ZS03   A0A154P6V7   A0A0T6AY19   A0A0A9XC14   A0A2J7REA8   A0A224XQU5   A0A0V0GBE6   A0A069DNQ4   A0A0J7NUU3   A0A1S3DCH6   A0A2P8ZJN6   A0A232F5P1   K7IYA2   A0A151X3T4   A0A195CZU2   E9IGP0   A0A026W9B3   A0A2C9LMJ6   F4WQT3   A0A195ESP5   A0A158NRS5   E2BHQ2   A0A1B6CXG0   A0A1D2NN15   A0A131Z815   A0A0P4VLW9   R4FLU0   G3MN62   A0A0B6Y717   A0A224Z3X1   A0A1E1XU94   A0A0C9S027   A0A023FEV2   A0A023FW37   A0A0K8RKY8   B7QN05   E2AX55   J3JXN1   R7VLU5   A0A2L2YKM5   K7IXX2   A0A1Y1M663   A0A0L8GZK2   A0A182PD97   A0A182V5L3   A0A182JX94   A0A182WXW0   A0A182I5Y1   A0A182MAA9   A0A1B0GJ20   A0A182WE46   Q7QE02   A0A1S3HZB9   A0A182Y9M6   A0A182RW74   E9GRR6   A0A023EE87   Q16JS4   A0A182FVG5   A0A2M4CYF1   A0A2M4CY91   A0A3B5PRK2   A0A3B5LAL0   A0A084WNL1   A0A182IVF0   A0A3B3YGJ0   A0A087XVV8   A0A3B3V3B2   A0A0S7HY48   A0A1L8E509   A0A3Q1EBE6   A0A3B5B421   A0A3Q1CR79   A0A3P8U374   A0A2P2I5S2   A0A3P9ND08   A0A146Y7H0   A0A1A8PMB1   A0A1A8LV58   A0A1A8JRD3   A0A1A8BBY0   A0A1A8V7U1   A0A146MK50   A0A3R7MBR7  

KEGG

101736391    no KO assigned | (RefSeq) cysteine-rich PDZ-binding protein

GO

GO:0008168   GO:0031122   GO:0008017   GO:0030425   GO:0030165   GO:0071558   GO:0046872   GO:0010468  

PANTHER

PTHR11805  

Length:

100

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

0.00037

Exp number, first 60 AAs:

0

Total prob of N-in:

0.56189

inside

1  -  100

 

 

Pi

21.525277

Theta

24.257457

Tajima's D

-0.429534

CLR

2.291884

CSRT

0.258937053147343

Interpretation

Uncertain