SGID Silkworm Genome Informatics Database
Gene
KWMTBOMO14400  Validated by peptides from experiments
Pre Gene Modal
BGIBMGA000117
Annotation
PREDICTED:_uncharacterized_protein_LOC101744111_[Bombyx_mori]
Location
Bomo_Chr24(+):5333259-5402715      View in EpiBrowser
Location in the cell
Nuclear   Reliability : 4.165
 

Sequence

CDS
ATGAGTGTTTTAATATTGTTTTTTGTGTACGTTTTTGTGCCGTGTGTTTTTGGCCAAGAGGCCGCGGCTTGTTATGGTGCTGGCAGCGTTGCAGGTGCAGCAATAGGTGCTTTCATAGCTGCACTTATTTTGGTTGCAGCTGCTTATTACCTTCGCAAATTGTATTGGAAGTCACGTAAAGGCAAGCATCTGGTCTTCTCAACGGATCCGGAATCGGTGAAGGATGAATTCGCGTTTGACAACCCTGGCTTCAAGCAAGACGAGCGTTGGCAGCATGACGCCACCCTGCCCGTGGGCGGGAAGCCCTCAGTCCTGCACGCCGAGTTCACTAAGCCAGAACAGAGTAAAGATGACACGTTTCTCCAGCGCGCTCGTATACGTCGAGTGAAGCTTTGGGCACGAGACTTCACGGGTCTCGGTTTCCGCTGTGGAGGAGGCGCCAGAGATGGAGTCCACGTACACTCAGTGCTCAGGAGTGGGCCTGCCGCCGCGGCTAAGTTACAACCAGGCGACAAAATAAAAAGCATCAAAATACAATTGATGGGGACTCCGTTAGAGGACGCTGTCAGCATTTTGTCTCTCGCGTCTCCATACCCTGTGGAGTTGGAGGTGGTGGAAGGTGGCAGAGCGAGCGGAGACGGCAGGACGGTACATCATCCGCTGCTGAAGAGGGCCGGCTCGACTGGAGACGTTACAACGCTCGAGAAAGAAGGTAAGCTATTGCACCCTCCGAAGTCACCGAACACTTCGAATTCGAACAACTCAACACTGGAAACCAAATACGGGAAGAGTGGCATCAAGAAGATATCCGAGAAGATCATCACTTCGACCCTCGAGAGGAACAAGAAGGAGAAACGAGACGGTCTACCCACCACTTTGGAAAGGGAAAACGAGAAGAACAGCAAAATGGCCAAAAGTAGACATTCAGATGTCCCTAGTGGTCTCAGCAAGCCTGAGAGGAACAAAACGAGACACTCGACAGGAGCTGACGTCATAGTGCCGCCAGAAAACGGGACAAGTCAAATCGAACACGCAGAAATGCAGAAGAGAGATTACGACCCCAAAAGGGGAATGAAGTTCGGCATCAGAGTACTCCCGCCCAACGTGCCTGACGACGGAGTTTTGAGGCAGAAGAGCGTCGAAAACGGAAGCGCCACCGTCGAGAAGAGATCCGTCGATGAAATAGACAAACCCGAGCCGCCACGACCAGCGCCGACCGTACAAATCAAACACGAAAACGAAACCGAACACAAAAAGCCAGTCGTGGCTAAGAGAAGAGAGAAAATGGCGCCGCCCATACCCAACGCTAGAGTTAAAACGAACGAAACTGAGAGTATCAGCCACGAGACCACAGTGTCGGACGCGTCACAAGCAAGCTTCGCCAGAAACGATCTAAACTCGAGCGGCATCAAACGCGACGAGAACGGAATCCCCCAGGAGATACCGCAGCAAATGCTCGACGCCGCCAAAGCGGCCAGAACCAACAGAAAGAGTTCCGTTGAAATATTAAACGAAAAAGAAAGACAAGATAACAGGAAAGAAAGGAAAAGCTCTGCAGAAACATTACATGACAAAGAGAAACATGAGCAACAGAGAGACGAGGCCCCTAAGCCCGCGAAAAAGTCAAAAGGGAAAGCCCCGTCTCCTCCGGACGCCGACAAAAACAAAACAGACGACAGTATCTTGGAACGATTGCAGAGAGTCAAGGATTTTCTTAAAAGCGAAAAGTACCATTCAAGCTTACTGAACGACTCTAGTGCGGACACGTCAGGTCGAGCGAGTGCCACACGGATCAACACTTCCACGCCAAAGGTCAACAAAACGAAAAGCACTAGCTCCACGCGTCTCGAAGACTCAATCAATTTCAGTCAAGACGACATTGACGATATAGTCTCGAAGCCATTCAAAAGGGAAAGCGACTCACTGAACAACTTCTTCGAGGATTCGAAGTCGAATCTCTCGTCCAACCAGGACGTCCATTCGGTCGTTTCCTTGAACCAGAGCGACAAAAGCGAACGAGGCTCCACGACGATCGAACTAAACAACAGCGACATCACAATACACAGTTCTCCATTGAACGCGACTGTACAGTCCGGGTCCGGCGATACGTCTCTTTTGGATGAAAACGAGAGGAAGGCCGCTTCCCTGGGTGATTTATCCAGGTTCGATTTAAGAACGAACGCCGGTAAACCATCAACCGGTACATTGGAAAGGGCTCAAAGTCTAGACATAACTGCCGACGACGCTGAGATAGCCGAGGCCACGATCTCGCCCAAAAAGAGAAAAGCTATGTCTGTGGTCGAAACTAACTTTTACGAAGCCAGCGGCGAAGACACTTTACCCGACACTCTTGACTCGGACAATGGAATCGTGATAAAACACAAAGAGCCCAGATTGAGTTTGAACGTGAAAACGTCCGCCATGGAAGGCCTTAGCACATTCCAGCGGAATCGTCTCAAGAAAGCATCCGAATTCGGTAACTTGGAGGACGCTATCGTCAAAGGATCGAGCAGCTCTATAGAATCGGACAAAGTCGACGAAGATCACGACAAGAGAACCAAATCCGGACTGCGTATTGGAAGCGAACACGAGACATCCGATCATTTAGCCAAGAGAATCATGGACGAGAACATGAAAGTCCATTTGAAGCTTGTATCGGAATTCGCTAAGACCACTTCAGACGGTAGCACCCTGGCACCACCAGACAACGATCCGCCGACACAACCTAACCTTACGAAACTCGAAACGACACCGACCAAATACGATGAGAAAATAACGATGAACTACGACACAAATATACCGGACGACTTAAAAGTATCGCGCAGTTCGTACGCGAACAGCTTGGAGAGACCAAAATCCGAGATGATGAAGAAACTGCTCGCCAAAAATCCTATACTCAACGTACACATCGACCAGAGCACGCAAAGAGAGGCTTCTACCAGTGCCGAAGTCCAAACGCCGATGACTGACGCTTCGAAATCCGCCATGCACCAACCCGACATAGTCAACTTCGATCTGAAACCCTCCGAAATGAAAACTAAAGATTACGAGGACTTCGTCAGCAACATCAGGGTCGGCTCGAACAATAGCAGCTTGAATAAGAAAATGGAAAGCTTCTCCACCGACTGGCGCGATTCAAAGGAGGGCAGCGATCTCGTCACATTCACCACAGACAGAACTCAAAATCTTGAAGACAAGTCACGTAAGACGTACACGAAATCGATTGAAATCGGCGAACCGACAATGAGGGTAATGCCGCCTGATGTCCTGGAAGGGATTCGAAGACGGCACGACGAGAAAGAGAACCGGACGCTTTACATGGAACCGGGCAACGTATCCCTGACAATGACACAAGAACCGACCCAAAAAACCGTCACAGTCAATGTAGCCGAAGACGAATTCGGGAACAAAGTCATAACGCGAAACGTCGAACAAATATCCACTAAATACGTCACCGCAAAAACTGAAGCACCTCTCCAAGTCGAGCAGTTCAGTTTTGGCATCATGAGAAACGCCGGTCCAACAGACGAACTGGCTCTAGTGGACGGCAACGTTAAGAATATCGATAAGAACGTACTGGACGAAATAAGACGGCAGAACCCGAATATGCATTTCGCATCGGACGAACCTTCGTACACCAAAACGGAGACAATAATTCTGAGCACTTCAGACATGGACGAGGGCCAAGCGAGGGCGTTGATGGAGAAAATGAAGAATGACCCTAGTTTCGTGAGGCGCAAAACGCCAGAGGAACCTACGCGATTAGGTGTCAGGATAACGCAGGATCTGGAAGACGTACAAACGTTCACTGAAGACGCTACCGAACTCACCAAGACCAGATACACCATCCACCCAGCATCAGCGTCCGACGAACAATGCAAATTAGAATCTCACGACGACGCGCACGTAACCGAGATAGAAGTGGTCGCAACGCGCGCCGACAGAAACGCTAAAGGGAAACCGGATAAGGTATCAGGCAGACAAAGGGTCCCGTATCGAGAACCGGTTCTATCGTACGAACTTGACATCGAGCTGTTGAGCAATTTTATATCGAACGAGAGATACCACTCGGCGAGACAGATGGCGGAGGCCAAGAAAACCAAAACGACCGCCTCAGACCCAAAGAAACGCCACTCCGACTACGACTTGCCCAGAAACAGCCATATCAAGTTCAGAACGGCGACGTACGAATCTCCAAAGGGCACGATAGTGACGAGCACGGATCTGGAAAACCGGAGACTATCGGAGCTAGATCAGATGCAGCTGAGATCGGTCAGTCCGCCCCAAAAACCGGTGTTGCTCGCGAAACCGAGCAGCATACCGGTGAAGGCAACCGAGAAAACCGCCAAAACCGGCGTCTCGTCGAAGATCCCGATCGTCTCGGCGCTTAAGTCCTCCAGCCAGGAGAACTTGGCTGAGAGTAGATTCTCTTTGCCGCGATCCCCCCCTCCCCAATACGGGAGCTCCGGTAACATATCTGTAACTTCGATCAAGAGCAGCTCTAGAAGTCCGAGCGGCGGGAAATTTTAA
Protein
MSVLILFFVYVFVPCVFGQEAAACYGAGSVAGAAIGAFIAALILVAAAYYLRKLYWKSRKGKHLVFSTDPESVKDEFAFDNPGFKQDERWQHDATLPVGGKPSVLHAEFTKPEQSKDDTFLQRARIRRVKLWARDFTGLGFRCGGGARDGVHVHSVLRSGPAAAAKLQPGDKIKSIKIQLMGTPLEDAVSILSLASPYPVELEVVEGGRASGDGRTVHHPLLKRAGSTGDVTTLEKEGKLLHPPKSPNTSNSNNSTLETKYGKSGIKKISEKIITSTLERNKKEKRDGLPTTLERENEKNSKMAKSRHSDVPSGLSKPERNKTRHSTGADVIVPPENGTSQIEHAEMQKRDYDPKRGMKFGIRVLPPNVPDDGVLRQKSVENGSATVEKRSVDEIDKPEPPRPAPTVQIKHENETEHKKPVVAKRREKMAPPIPNARVKTNETESISHETTVSDASQASFARNDLNSSGIKRDENGIPQEIPQQMLDAAKAARTNRKSSVEILNEKERQDNRKERKSSAETLHDKEKHEQQRDEAPKPAKKSKGKAPSPPDADKNKTDDSILERLQRVKDFLKSEKYHSSLLNDSSADTSGRASATRINTSTPKVNKTKSTSSTRLEDSINFSQDDIDDIVSKPFKRESDSLNNFFEDSKSNLSSNQDVHSVVSLNQSDKSERGSTTIELNNSDITIHSSPLNATVQSGSGDTSLLDENERKAASLGDLSRFDLRTNAGKPSTGTLERAQSLDITADDAEIAEATISPKKRKAMSVVETNFYEASGEDTLPDTLDSDNGIVIKHKEPRLSLNVKTSAMEGLSTFQRNRLKKASEFGNLEDAIVKGSSSSIESDKVDEDHDKRTKSGLRIGSEHETSDHLAKRIMDENMKVHLKLVSEFAKTTSDGSTLAPPDNDPPTQPNLTKLETTPTKYDEKITMNYDTNIPDDLKVSRSSYANSLERPKSEMMKKLLAKNPILNVHIDQSTQREASTSAEVQTPMTDASKSAMHQPDIVNFDLKPSEMKTKDYEDFVSNIRVGSNNSSLNKKMESFSTDWRDSKEGSDLVTFTTDRTQNLEDKSRKTYTKSIEIGEPTMRVMPPDVLEGIRRRHDEKENRTLYMEPGNVSLTMTQEPTQKTVTVNVAEDEFGNKVITRNVEQISTKYVTAKTEAPLQVEQFSFGIMRNAGPTDELALVDGNVKNIDKNVLDEIRRQNPNMHFASDEPSYTKTETIILSTSDMDEGQARALMEKMKNDPSFVRRKTPEEPTRLGVRITQDLEDVQTFTEDATELTKTRYTIHPASASDEQCKLESHDDAHVTEIEVVATRADRNAKGKPDKVSGRQRVPYREPVLSYELDIELLSNFISNERYHSARQMAEAKKTKTTASDPKKRHSDYDLPRNSHIKFRTATYESPKGTIVTSTDLENRRLSELDQMQLRSVSPPQKPVLLAKPSSIPVKATEKTAKTGVSSKIPIVSALKSSSQENLAESRFSLPRSPPPQYGSSGNISVTSIKSSSRSPSGGKF

Summary

Uniprot
H9IS90   A0A3S2LEH2   A0A0L7KZ62   A0A2H1WXQ6   A0A194RIH8   A0A2A4JHB3   + More
A0A194QIV3  
Pubmed
19121390    26227816    26354079   
EMBL
BABH01024085    RSAL01000179    RVE44957.1    JTDY01004161    KOB68512.1    ODYU01011863    + More
SOQ57849.1    KQ460124    KPJ17628.1    NWSH01001586    PCG70782.1    KQ458859    KPJ04860.1   
Proteomes
UP000005204    UP000283053    UP000037510    UP000053240    UP000218220    UP000053268    + More
PRIDE
H9IS90   
Interpro
IPR001478   PDZ        + More
IPR036034   PDZ_sf       
SUPFAM
SSF50156   SSF50156       
ProteinModelPortal
H9IS90   A0A3S2LEH2   A0A0L7KZ62   A0A2H1WXQ6   A0A194RIH8   A0A2A4JHB3   + More
A0A194QIV3  
PDB
4CMZ     E-value=0.0410189,     Score=92

Ontologies

KEGG
101744111    no KO assigned | (RefSeq) uncharacterized LOC101744111
GO
GO:0016021   GO:0005515   GO:0008270   GO:0005509   GO:0001784   GO:0006816   GO:0005507   GO:0004713   GO:0016491   GO:0015930  

Topology

SignalP
Position:   1 - 18,         Likelihood:  0.676285
 
 
Length:
1509
Number of predicted TMHs:
2
Exp number of AAs in TMHs:
42.4516300000001
Exp number, first 60 AAs:
42.39694
Total prob of N-in:
0.02723
POSSIBLE N-term signal
sequence
outside
1  -  3
TMhelix
4  -  26
inside
27  -  27
TMhelix
28  -  50
outside
51  -  1509
 
 

Population Genetic Test Statistics

Pi
225.061206
Theta
157.798958
Tajima's D
1.124114
CLR
0.196493
CSRT
0.692465376731163
Interpretation
Uncertain
Peptides ×
Source Sequence Identity Evalue
26822097 TVTVNVAEDEFGNK 100.00 0.001
28467696 EASQTSNENVIIK 100.00 0.001
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