SGID Silkworm Genome Informatics Database
Gene
KWMTBOMO14380  Validated by peptides from experiments
Pre Gene Modal
BGIBMGA002254
Annotation
PREDICTED:_uncharacterized_protein_LOC101745787_[Bombyx_mori]
Location in the cell
Extracellular   Reliability : 2.574 Nuclear   Reliability : 1.918
 

Sequence

CDS
ATGTTGGGCCCGTGCAGTTGTGTTCTCGTGCTTTTGTCCGCGGGACTGGCTAAAAACACACACGGCGAACTCGCGAATGTTGCTTCAGTGAAAATTAATTCTGACGATAAAAGCGATTCAATATTTTTTGTTGTACCAAAGGAACCTGGGTTTGACTCACATTTGAGCAGTGATATAACATATGTAGTCAAGGACTCGGATGACTACGAATATGATTTCGAGGACAGATATAGATCAGATTCGAATAATGAGAAAGAAGATTTCGTCATTAATGATATCATAAATGCGAATAGACACGGTTTCAGTCATGAAGTCGATCATCCGAAGAACGTACCTAATTATTTTACAGTCGATAACGTTAAACACAACACCGAATCTGCAAATGACGATGCTGCATATATACTTTATCATCTTCTTAGGAATACCAACAACAACGACCATTCCGATTTCAAGGAAGCGAAAGACAGCCTTCGTTCTGCTCTCAGAGCCCGATGCCAGAAAGTAGAACACTGCGTCCGAAAATGTCAAAAGAAACAGATAGATTGCCCTATTAACTGCAAAGAAAGTTACGACGAATTTAACATTTGCCCATCGGAGAAACCAAAAGGATGCAAAAAAACGAAATGCGGAAGGACTTTGCCACCAAATTGGTTGTAA
Protein
MLGPCSCVLVLLSAGLAKNTHGELANVASVKINSDDKSDSIFFVVPKEPGFDSHLSSDITYVVKDSDDYEYDFEDRYRSDSNNEKEDFVINDIINANRHGFSHEVDHPKNVPNYFTVDNVKHNTESANDDAAYILYHLLRNTNNNDHSDFKEAKDSLRSALRARCQKVEHCVRKCQKKQIDCPINCKESYDEFNICPSEKPKGCKKTKCGRTLPPNWL

Summary

Ontologies

GO

Topology

SignalP
Position:   1 - 22,         Likelihood:  0.973527
 
 
Length:
218
Number of predicted TMHs:
0
Exp number of AAs in TMHs:
0.00509
Exp number, first 60 AAs:
0.00509
Total prob of N-in:
0.01518
outside
1  -  218
 
 

Population Genetic Test Statistics

Pi
15.104475
Theta
14.796773
Tajima's D
-0.664324
CLR
27.534436
CSRT
0.208389580520974
Interpretation
Uncertain

Multiple alignment of Orthologues

 
 

Gene Tree

 
 
Peptides ×
Source Sequence Identity Evalue
26822097 NVPNYFTVDNVK 100.00 2e-05
26822097 INSDDKSDSIFFVVPK 100.00 2e-04
26822097 IAITAAEFIAYQCEK 100.00 4e-04
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