Gene

KWMTBOMO14366

Pre Gene Modal

BGIBMGA013305

Annotation

PREDICTED:_Golgi_pH_regulator_[Papilio_xuthus]

Location

Bomo_Chr24(+):3663067-3669457      View in EpiBrowser

Location in the cell

PlasmaMembrane   Reliability : 4.801

CDS

ATGTCTTTCTTAGAAGATACGTTAATAATTTTAGGATCTCAGGTAGTATTCTTCGTTGGAGGGTGGATTTTCTTCGTAAAACAACTGTTCCGTGATTATGAAGTACATCATACACTCGTACAGCTTATATTCTCTGTTACGTTCGCCCTAAGCTGTACTATGTTCGAGCTGATCATATTCGAAATCATTGGCTATTTAGATACAAGTTCCCGTTACTTTCATTGGAATTTAGGCTTATATTCACTGCTGTTTATGGTGATAGCTCTCATACCCTTCTACATTGCTTTTTTCTGCATAAGCAACATTAGATTTGTGTCACATAACTCCATTAGGCCTCTCACCGTGTTTGTATGGTTCATATACTTGTATTTCTTTTGGAAAATCGGCGATCCATTTCCAATACTGAGTCCTAAAAAGGGCATACTCTCGATAGAGCAAGGAGTTTCAAGGATCGGTGTCATCGGTGTGACTGTCATGGCTCTTCTGTCAGGTTTCGGTGCTGTCAACTATCCTTACACTTCAATGGCTATATTTATAAGACCAGTAACCCAATCCGATGTACTATCAATAGAAAAGAAACTGCTCCAAACAATGGACATGATATTGGTTAAGAAGAAGAGGATAGCTTTAGCTGAAGCGAACAGCGTTGGTGGGAGACAGTATAATATGTTGGACCAATCTGGAACGAAAAATAGAGGTTTCTGGACAAACATTCTGTCCAGCGTTGGAAGTATTGCGAATCCCTTAGGTCATGGAACGGAAAATATTAGTCAATTGAGGCAAGAGATATCCGGCTTAGAGGAGCTGAGCCGTCAATTGTTCTTAGAAGCGCACGACGCCAGAACGATGAGAGAAAAAATCGAATGGTCGAAGACTTTTCAAGGGAAATATTTCAATTTCTTAGGTTATTTCTTCTCTTTGTATTGTATATGGAAGATATTTATTTCCACCGTGAACATAGTATTCGACAGAGTCGGCAAAAAGGATCCGGTCACAAAAGGCCTAGAGATAGTCGTCCACTGGCTCGGTTGGAACATAGATGTCGCTTTTTGGTCTCAGCACGTCTCTTTCATACTCGTCGGCTGTATAGTGCTCACCAGCATCAGAGGTTTGCTGCTGACGTTGACGAAGTTCTTCTACAAGATCTCATCATCGAAATCATCGAATATAATCGTTTTAATACTGGCCCAGATAATGGGAATGTATTTCTGTTCGTCAGTGCTGCTGATGAGAATGAACATGCCCCCCGAATACCGCATCATAATAACTCAAGTCCTCGGCGAATTACAGTTCAACTTCTATCACAGATGGTTCGACGTAATATTTTTAGTTAGCGCACTGACCAGTATATTTACACTGTATTTAGCCCACAAACAGCCGTCGGTCAATTAA

Protein

MSFLEDTLIILGSQVVFFVGGWIFFVKQLFRDYEVHHTLVQLIFSVTFALSCTMFELIIFEIIGYLDTSSRYFHWNLGLYSLLFMVIALIPFYIAFFCISNIRFVSHNSIRPLTVFVWFIYLYFFWKIGDPFPILSPKKGILSIEQGVSRIGVIGVTVMALLSGFGAVNYPYTSMAIFIRPVTQSDVLSIEKKLLQTMDMILVKKKRIALAEANSVGGRQYNMLDQSGTKNRGFWTNILSSVGSIANPLGHGTENISQLRQEISGLEELSRQLFLEAHDARTMREKIEWSKTFQGKYFNFLGYFFSLYCIWKIFISTVNIVFDRVGKKDPVTKGLEIVVHWLGWNIDVAFWSQHVSFILVGCIVLTSIRGLLLTLTKFFYKISSSKSSNIIVLILAQIMGMYFCSSVLLMRMNMPPEYRIIITQVLGELQFNFYHRWFDVIFLVSALTSIFTLYLAHKQPSVN

Uniprot

A0A194QHE8   A0A2A4K2I7   A0A3S2P0R6   A0A194RIG3   H9JUU2   A0A067QTY0   + More
A0A2J7PH25   A0A1B6KGU9   S4PE41   A0A158NDK8   A0A212ERA8   A0A088A809   K7J9B6   A0A0M8ZZD9   A0A1B6GW51   A0A195BP51   A0A195DB96   A0A151XEH0   A0A069DUJ1   A0A195F3K6   E2A0H9   A0A195CMZ9   A0A023F4Z3   A0A3L8DZU1   E9IU83   A0A0P4VM54   T1IDN0   A0A232FLY0   A0A1E1W5I3   E0VJL9   A0A0A9XC65   B0XHU3   A0A1Q3F6R3   D2CFW7   A0A2R5LI15   Q16KQ4   A0A1W4WJS1   A0A182WR70   A0A182FUX6   A0A1S4H771   A0A1Y9GLP0   A0A182VDH9   A0A1L8DK11   U5EKS7   A0A182TEY4   A0A084VEV9   A0A182RXN4   A0A2M4AIC4   A0A2M4BMW7   A0A182MEG0   A0A293N453   A0A182SQY1   A0A182P346   A0A0P5FTA0   W5JWQ9   A0A182QB45   A0A131YM02   A0A182YE80   L7M8M7   A0A1E1X3S1   A0A023GNC4   G3MPD1   T1JAQ6   A0A182WDA7   A0A224YZ18   A0A182K4S8   A0A0P4ZF48   Q7PSQ7   A0A131XEE9   A0A0L7RB93   A0A023FMF7   F4W548   A0A1D2NML6   E2BII7   A0A0N8A330   A0A131XZ81   A0A023FXD6   A0A0P5FBK7   A0A0K8R4B3   A0A0P5G7S5   A0A026WIM3   A0A154PN25   A0A182N342   A0A1B6CG01   A0A1Y1MWL2   A0A3Q2WDH9   I3KAD0   A0A3P8NN47   A0A3P9AVI4   A0A3Q4GIX7   A0A3P9MTR0   A0A1W4ZXM1   A0A3B4Y437   A0A3B5B9G1   A0A3B3DB00   A0A3B4TKE7   A0A3Q1EHR8   A0A3B3V3F1   A0A1S2X113   A0A3P8RKI2  

Pubmed

26354079    19121390    24845553    23622113    21347285    22118469    + More
20075255    26334808    20798317    25474469    30249741    21282665    27129103    28648823    20566863    25401762    18362917    19820115    17510324    12364791    24438588    20920257    23761445    26830274    25244985    25576852    28503490    22216098    28797301    28049606    21719571    27289101    24508170    28004739    25186727    29451363    20433749   

EMBL

KQ458859    KPJ04844.1    NWSH01000255    PCG77983.1    RSAL01000064    RVE49451.1    + More
KQ460124    KPJ17613.1    BABH01031037    KK852954    KDR13284.1    NEVH01025150    PNF15632.1    GEBQ01029304    JAT10673.1    GAIX01004712    JAA87848.1    ADTU01012699    AGBW02013061    OWR44033.1    KQ435793    KOX74220.1    GECZ01003123    JAS66646.1    KQ976424    KYM88290.1    KQ981082    KYN09689.1    KQ982254    KYQ58761.1    GBGD01001418    JAC87471.1    KQ981820    KYN35165.1    GL435626    EFN72882.1    KQ977600    KYN01464.1    GBBI01002628    JAC16084.1    QOIP01000002    RLU25328.1    GL765847    EFZ15867.1    GDKW01000990    JAI55605.1    ACPB03012772    NNAY01000034    OXU31751.1    GDQN01008816    JAT82238.1    DS235226    EEB13575.1    GBHO01028949    GBRD01017075    GBRD01014993    JAG14655.1    JAG48752.1    DS233208    EDS28666.1    GFDL01011803    JAV23242.1    DS497670    EFA13037.1    GGLE01005036    MBY09162.1    CH477943    EAT34887.1    AAAB01008816    APCN01005462    GFDF01007323    JAV06761.1    GANO01001693    JAB58178.1    ATLV01012338    KE524783    KFB36503.1    GGFK01007218    MBW40539.1    GGFJ01005221    MBW54362.1    AXCM01006844    GFWV01023177    MAA47904.1    GDIQ01251750    GDIP01132387    LRGB01001005    JAJ99974.1    JAL71327.1    KZS14093.1    ADMH02000001    ETN68158.1    AXCN02001130    GEDV01008570    JAP79987.1    GACK01004822    JAA60212.1    GFAC01005268    JAT93920.1    GBBM01001053    JAC34365.1    JO843732    AEO35349.1    JH432002    GFPF01007864    MAA19010.1    GDIP01213576    JAJ09826.1    EAA05189.5    GEFH01004133    JAP64448.1    KQ414617    KOC68139.1    GBBK01002452    JAC22030.1    GL887596    EGI70744.1    LJIJ01000005    ODN06477.1    GL448512    EFN84497.1    GDIP01187297    JAJ36105.1    GEFM01003253    JAP72543.1    GBBL01001128    JAC26192.1    GDIQ01256768    JAJ94956.1    GADI01007912    JAA65896.1    GDIQ01245359    JAK06366.1    KK107200    EZA55506.1    KQ434977    KZC12864.1    GEDC01024995    JAS12303.1    GEZM01021551    JAV88950.1    AERX01029986   

Proteomes

UP000053268    UP000218220    UP000283053    UP000053240    UP000005204    UP000027135    + More
UP000235965    UP000005205    UP000007151    UP000005203    UP000002358    UP000053105    UP000078540    UP000078492    UP000075809    UP000078541    UP000000311    UP000078542    UP000279307    UP000015103    UP000215335    UP000009046    UP000002320    UP000007266    UP000008820    UP000192223    UP000076407    UP000069272    UP000075840    UP000075903    UP000075902    UP000030765    UP000075900    UP000075883    UP000075901    UP000075885    UP000076858    UP000000673    UP000075886    UP000076408    UP000075920    UP000075881    UP000007062    UP000053825    UP000007755    UP000094527    UP000008237    UP000053097    UP000076502    UP000075884    UP000264840    UP000005207    UP000265100    UP000265160    UP000261580    UP000242638    UP000192224    UP000261360    UP000261400    UP000261560    UP000261420    UP000257200    UP000261500    UP000087266    UP000265080   

PRIDE

H9JUU2   

Pfam

PF12537   GPHR_N        + More
PF12430   ABA_GPCR
PF00046   Homeodomain

Interpro

IPR015672   GPHR/GTG        + More
IPR022535   Golgi_pH-regulator_cons_dom       
IPR025969   ABA_GPCR_dom       
IPR001356   Homeobox_dom       
IPR017970   Homeobox_CS       
IPR009057   Homeobox-like_sf       

SUPFAM

SSF46689   SSF46689       

CDD

cd00086  homeodomain

ProteinModelPortal

A0A194QHE8   A0A2A4K2I7   A0A3S2P0R6   A0A194RIG3   H9JUU2   A0A067QTY0   + More
A0A2J7PH25   A0A1B6KGU9   S4PE41   A0A158NDK8   A0A212ERA8   A0A088A809   K7J9B6   A0A0M8ZZD9   A0A1B6GW51   A0A195BP51   A0A195DB96   A0A151XEH0   A0A069DUJ1   A0A195F3K6   E2A0H9   A0A195CMZ9   A0A023F4Z3   A0A3L8DZU1   E9IU83   A0A0P4VM54   T1IDN0   A0A232FLY0   A0A1E1W5I3   E0VJL9   A0A0A9XC65   B0XHU3   A0A1Q3F6R3   D2CFW7   A0A2R5LI15   Q16KQ4   A0A1W4WJS1   A0A182WR70   A0A182FUX6   A0A1S4H771   A0A1Y9GLP0   A0A182VDH9   A0A1L8DK11   U5EKS7   A0A182TEY4   A0A084VEV9   A0A182RXN4   A0A2M4AIC4   A0A2M4BMW7   A0A182MEG0   A0A293N453   A0A182SQY1   A0A182P346   A0A0P5FTA0   W5JWQ9   A0A182QB45   A0A131YM02   A0A182YE80   L7M8M7   A0A1E1X3S1   A0A023GNC4   G3MPD1   T1JAQ6   A0A182WDA7   A0A224YZ18   A0A182K4S8   A0A0P4ZF48   Q7PSQ7   A0A131XEE9   A0A0L7RB93   A0A023FMF7   F4W548   A0A1D2NML6   E2BII7   A0A0N8A330   A0A131XZ81   A0A023FXD6   A0A0P5FBK7   A0A0K8R4B3   A0A0P5G7S5   A0A026WIM3   A0A154PN25   A0A182N342   A0A1B6CG01   A0A1Y1MWL2   A0A3Q2WDH9   I3KAD0   A0A3P8NN47   A0A3P9AVI4   A0A3Q4GIX7   A0A3P9MTR0   A0A1W4ZXM1   A0A3B4Y437   A0A3B5B9G1   A0A3B3DB00   A0A3B4TKE7   A0A3Q1EHR8   A0A3B3V3F1   A0A1S2X113   A0A3P8RKI2  

KEGG

101738930    K22193 golgi pH regulator | (RefSeq) Golgi pH regulator

GO

GO:0016021   GO:0051452   GO:0008308   GO:0032580   GO:0005634   GO:0043565   GO:0006355   GO:0016020   GO:0046872   GO:0005975   GO:0016773   GO:0005488   GO:0005507   GO:0004713   GO:0016491   GO:0015930  

PANTHER

PTHR15948  

Subcellular location

Nucleus  

Length:

463

Number of predicted TMHs:

9

Exp number of AAs in TMHs:

198.12879

Exp number, first 60 AAs:

42.00436

Total prob of N-in:

0.00692

POSSIBLE N-term signal

sequence

outside

1  -  3

TMhelix

4  -  26

inside

27  -  37

TMhelix

38  -  60

outside

61  -  74

TMhelix

75  -  97

inside

98  -  103

TMhelix

104  -  126

outside

127  -  145

TMhelix

146  -  168

inside

169  -  299

TMhelix

300  -  322

outside

323  -  352

TMhelix

353  -  375

inside

376  -  387

TMhelix

388  -  410

outside

411  -  432

TMhelix

433  -  455

inside

456  -  463

 

 

Pi

297.781717

Theta

194.554326

Tajima's D

1.997455

CLR

0.177569

CSRT

0.880005999700015

Interpretation

Uncertain