Silkworm Genome Informatics Database

Gene

KWMTBOMO14362

Pre Gene Modal

BGIBMGA013300

Annotation

PREDICTED:_uncharacterized_protein_LOC106130452_[Amyelois_transitella]

Location

Bomo_Chr24(-):3594066-3595767 View in EpiBrowser

Location in the cell

Cytoplasmic Reliability : 1.941 Nuclear Reliability : 1.634

CDS

ATGACTGATATACACTGTCTACCAGTAGAAACTCTCGTAGAAATACTAGTTAAAACTGATGGCACGACCCTAGGTAAGTGTCGGAGAGTGTGTAAAAAATGGAAAGAAATTATAGACGATGTGGATTTGCTATGGGAAAAAATTTGCAGAAAAGAATACAAGTATCCCTCGAGGATCGCCAGAAAACGTTGCGGAAATGACACGAGATGGTATCATTTATATAAAAATATTAAAACTTGGTCGAATGTTATGTCGTACGAGATAAATATTCGTGAATTCTACAAATTCAGTTTGAATGATAAATCCCATGCCCTAGGCATCGATTACGGAGTACTACCCCTAAAAGACACTAGAGGAGTAGTGCTGTACGATATGAATAACTTAAAGTATATACCTGTCGCGGTTCCAGAGAGGAACTGCCTTAAAATAGCAAACAACGACCATGTCAGTGTTGTATTAGTGAAGTCCGGTATCTTTGTTCAGAAAACCGTTGAAGATCAAGAAAATATGTCTGAAGCGTTCTTCTATGCTGATGATTTCGTACTACACGGAGAGGAACTGTATTTCTACAATAACCGGGACATATACAAATGTGATTTAAGTTTTCATAATTTATCATCAAAATTGATTTTGCACTGTAATTATGATATCAAAGCATTGCAGTACAGCGATTGTACGATTCATGTATTTACAGACTGCGGTAAAATAGTAAACATATCTAAAGATCTCACTGTCAATGTGAGACCTTTAAACTGCCCCCCAGAATGGATAAAACAAATAAAACATATATGTCCAATTAATGATAAAAACTTTGTATGTTACTCAAGAAATTTATTCAAGATTGAAACAGACAAATACCGACATTTATATTTGGATTTTCCACCGATCACAGCCCTATTCTTTTATGGAGACTTTGTTTTGATTGGTACAAGAGCTGGAGAAATCTTGTTATATCGGTTGTCCAGTCAAAAGAAGGCCACAAAGCCGATATTCGAGAAACTATCAGAGTTACCAGACGGAAAGTTTGCTGTGCAATTGGATGTGTGTGAAAGAAAGTCTGGACCAGTTATTGTGGCTGCAACATTCTTTGAGATTCTGTTGTTGGAAATAGATTTCTTTCCTTATGAAAAAGAAAATAAAACTTCATTCGAAATGAACAAGTTACAAATGTACAAGCGTATGTTGAGGCTACGGGATAGATTACGTGTTGGAATACCGTCTCTAAAAGCCATTTCTTAA

Protein

MTDIHCLPVETLVEILVKTDGTTLGKCRRVCKKWKEIIDDVDLLWEKICRKEYKYPSRIARKRCGNDTRWYHLYKNIKTWSNVMSYEINIREFYKFSLNDKSHALGIDYGVLPLKDTRGVVLYDMNNLKYIPVAVPERNCLKIANNDHVSVVLVKSGIFVQKTVEDQENMSEAFFYADDFVLHGEELYFYNNRDIYKCDLSFHNLSSKLILHCNYDIKALQYSDCTIHVFTDCGKIVNISKDLTVNVRPLNCPPEWIKQIKHICPINDKNFVCYSRNLFKIETDKYRHLYLDFPPITALFFYGDFVLIGTRAGEILLYRLSSQKKATKPIFEKLSELPDGKFAVQLDVCERKSGPVIVAATFFEILLLEIDFFPYEKENKTSFEMNKLQMYKRMLRLRDRLRVGIPSLKAIS

Uniprot

A0A2A4K1S2 A0A2W1BA22 A0A194Q847 A0A2H1X125 A0A0N0PCR3 A0A1E1WID9 + More
A0A212EN19 A0A0N0PCF8 A0A194QCJ9 A0A194R4T7 A0A194PT21 A0A2W1AZW9 A0A2A4JX01 A0A0N1INY0 A0A194Q4G6 A0A2A4JCU3 A0A2H1VU84 A0A212FKM9

Pubmed

28756777 26354079 22118469

EMBL

NWSH01000255 PCG77976.1 KZ150233 PZC71988.1 KQ459386 KPJ01165.1 + More
ODYU01012530 SOQ58896.1 KQ460601 KPJ13812.1 GDQN01004271 JAT86783.1 AGBW02013754 OWR42876.1 KPJ13811.1 KPJ01166.1 KQ460890 KPJ10871.1 KQ459593 KPI96462.1 KZ150547 PZC70562.1 NWSH01000417 PCG76537.1 KQ460736 KPJ12612.1 KQ459463 KPJ00437.1 NWSH01001921 PCG69669.1 ODYU01004481 SOQ44397.1 AGBW02008029 OWR54286.1

Proteomes

UP000218220 UP000053268 UP000053240 UP000007151

Pfam

PF12937 F-box-like + More
PF00646 F-box

Interpro

IPR036047   F-box-like_dom_sf        + More
IPR036322   WD40_repeat_dom_sf
IPR001810   F-box_dom

SUPFAM

SSF81383 SSF81383 + More
SSF50978 SSF50978

ProteinModelPortal

A0A2A4K1S2 A0A2W1BA22 A0A194Q847 A0A2H1X125 A0A0N0PCR3 A0A1E1WID9 + More
A0A212EN19 A0A0N0PCF8 A0A194QCJ9 A0A194R4T7 A0A194PT21 A0A2W1AZW9 A0A2A4JX01 A0A0N1INY0 A0A194Q4G6 A0A2A4JCU3 A0A2H1VU84 A0A212FKM9

KEGG

101737193 no KO assigned | (RefSeq) uncharacterized LOC101737193

GO

GO:0005515 GO:0006662 GO:0015035 GO:0004674 GO:0005488 GO:0005507 GO:0004713 GO:0016491 GO:0015930

Length:

412

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

5.19871

Exp number, first 60 AAs:

0.00018

Total prob of N-in:

0.01708

outside

1 - 412

Pi

241.697968

Theta

186.376445

Tajima's D

0.805303

CLR

0

CSRT

0.604819759012049

Interpretation

Uncertain

Sequence

Summary

Ontologies

Topology

Population Genetic Test Statistics