Silkworm Genome Informatics Database

Gene

KWMTBOMO14356

Annotation

PREDICTED:_uncharacterized_protein_LOC105842638_[Bombyx_mori]

Location

Bomo_Chr24(-):2961981-2982277 View in EpiBrowser

Location in the cell

Nuclear Reliability : 3.087

CDS

ATGGAGATACAGCATCTTCCTGTTGTGAAGCTAGAATTGGGTGCCAACTTGGACGCCAGTAAAGTAGTGGAAGGCTCCGATATATATCTGGATTGTAGAGTGCGAGCGAACCCCTGGCACAACCACGTCTATTTCACACATAACGGTGTGATAGTAAAATCCGGGCCAGGCGTCCTCCTGGCCAATCAGAGTCTGGTGCTGCAGAAGGTATCCAGAAAAGCGGCTGGTTCTTACGTTTGCTCGGCCAGGAACAGCCTCGGCGACGGGTCCAGTGAACCCCTAACATTGGACGTCAAGTTTTCCCCAACGTGTAGATCAAACCAGCCTTTAGTGCTAAGAGCCGCTAGGGGCGAGGTGGTAGAAATTGAATGCGACTTAGACGCCAATCCCCAGGATTCCATAAGGTACCACTGGTGGTTCAACAGTTCTGCTCACAGCAAACACGAGCTCTCCACCACAGCCATGACGACAGCTCAGAACCTGCCTGGAACGTATCTCTACATGGTGAACACGTCTTCGGACTACGGCTGGGTTCAATGCTCAGGATCTAACATGGTGGGAGGACAGGCGAAGCCATGTCTATTCCACATACTTCCAGCTGACAAACCATCGGCACCTAAAGCATGCGAAATCACGAATGTAACATACGACTCTTTGACACTGAACTGCACGCCGGGACACGACGGCGGCCTTCGACAATACTTTCTGTTACAAATATTCGACATGGCAACCGGCTTACTGCTCCGCAATATGACGGGGGAAGAACCAGAATTCGAAGTGTCGGGGTTGCCAGCCGGCAACGCTTTAGGAGTTGCCATAAAAGCGTTTAATCGAAAAGGATCTAGCGAGCCATTGTCGTTGAGTTCGAACTTACTGAAGTACCCACAAAGACATACGGCACAAGTACCAGTTAAAGTTGAACTTACCACAGTATTGATAATAGTATTAGCGGCGGTAGGTCTGATCGCTGCGATGACGGCTTTGTCAGCCGCGGTGTTCTGCTGCCGATACTGTCAGAAGAAGGAAGGTAAAAGTGAGAAAGACAAGCGGCAACAGGACGAGACCTTGAATATACCACTAACCAGCACCAAGGAATCTGAAAGCGTTGATAGTATAGACAAAAATCCAGATATAATACCACTGGATGGAAAAATTAGTGACAGCTGTTCAAATAAATCCTCCACCACTGACTACAGCTCTATAAGGCCTCTCATTTCGAAAACGCCAGACAAATACGATCTTCAAACGAACTGCGACAGATTCTACGACCACAATCTGGACCAATGCAACCAGTACATACAAGTTCGCCCAATCGATTATAGACGGCCCACGTATGCACCAACTTTGGCTCCAATGCCGAATTTGGGGCCAAGCATACAGAGTCTGGGGCCGATGAGCAGTCTACATTTATCGAATGTTGGACCAAACGATTGTCATAGACAGTACGATAAGGTTTACGAAGATTGGTTGAAATATAAGAATGCTTTGCCGCTGAATACTACTGGCCTGTTACCAGCTGAACAGCTAATGCCTCCCGAACTATACGCGACCCCCCCTCCAACGATATACAGTAACAGCAGCAGGAATCCCCTCAATCTGACGCAGATGCCGAATTTGGAGCCGAGATACCACTTGGAGCCAAGGTCCCTGATGACCCAGGACTCCAGGAGCTGTTCCAACTCGCCCCCGGTTAGATTTAACACGGACAACACCGTTTATTATAGCAAAGGCGTGGACCGAACCAATACGTTACCACATTTGAAAAGTAGGATAAATGTAAATTCTCCGGTACAGACGCCGTGTGATAACAAGACTAGCTCAACAAAATCACCAGAAACAAATTTAGAGCATTTAAAATTAACAACGAAAGACTGA

Protein

MEIQHLPVVKLELGANLDASKVVEGSDIYLDCRVRANPWHNHVYFTHNGVIVKSGPGVLLANQSLVLQKVSRKAAGSYVCSARNSLGDGSSEPLTLDVKFSPTCRSNQPLVLRAARGEVVEIECDLDANPQDSIRYHWWFNSSAHSKHELSTTAMTTAQNLPGTYLYMVNTSSDYGWVQCSGSNMVGGQAKPCLFHILPADKPSAPKACEITNVTYDSLTLNCTPGHDGGLRQYFLLQIFDMATGLLLRNMTGEEPEFEVSGLPAGNALGVAIKAFNRKGSSEPLSLSSNLLKYPQRHTAQVPVKVELTTVLIIVLAAVGLIAAMTALSAAVFCCRYCQKKEGKSEKDKRQQDETLNIPLTSTKESESVDSIDKNPDIIPLDGKISDSCSNKSSTTDYSSIRPLISKTPDKYDLQTNCDRFYDHNLDQCNQYIQVRPIDYRRPTYAPTLAPMPNLGPSIQSLGPMSSLHLSNVGPNDCHRQYDKVYEDWLKYKNALPLNTTGLLPAEQLMPPELYATPPPTIYSNSSRNPLNLTQMPNLEPRYHLEPRSLMTQDSRSCSNSPPVRFNTDNTVYYSKGVDRTNTLPHLKSRINVNSPVQTPCDNKTSSTKSPETNLEHLKLTTKD

Uniprot

A0A2W1BEW8 A0A3S2NV12 A0A2H1VLC3 A0A2A4J388 A0A194Q707 A0A0N1I9C1 + More
A0A194Q6K3 A0A1W4WET1 A0A0A9W6P0 A0A146KNR1 A0A0A9VR67 A0A0Q9WXE6 B4K4E9 A0A1Y1NJZ5

Pubmed

28756777 26354079 25401762 26823975 17994087 18057021 + More
28004739

EMBL

KZ150149 PZC72851.1 RSAL01000064 RVE49446.1 ODYU01003193 SOQ41618.1 + More
NWSH01003736 PCG65863.1 KQ459386 KPJ01164.1 KQ460601 KPJ13813.1 KPJ01163.1 GBHO01040125 JAG03479.1 GDHC01021707 JAP96921.1 GBHO01044687 JAF98916.1 CH933806 KRG00694.1 EDW13901.2 KRG00693.1 GEZM01002480 JAV97230.1

Proteomes

UP000283053 UP000218220 UP000053268 UP000053240 UP000192223 UP000009192 + More

Pfam

PF08205   C2-set_2        + More
PF07686   V-set
PF00047   ig
PF13895   Ig_2

Interpro

IPR003598   Ig_sub2        + More
IPR036179   Ig-like_dom_sf
IPR013106   Ig_V-set
IPR036116   FN3_sf
IPR003599   Ig_sub
IPR007110   Ig-like_dom
IPR013162   CD80_C2-set
IPR013783   Ig-like_fold
IPR003961   FN3_dom
IPR013151   Immunoglobulin

SUPFAM

SSF49265 SSF49265 + More
SSF48726 SSF48726

Gene 3D

2.60.40.10

CDD

cd00063 FN3

ProteinModelPortal

A0A2W1BEW8 A0A3S2NV12 A0A2H1VLC3 A0A2A4J388 A0A194Q707 A0A0N1I9C1 + More
A0A194Q6K3 A0A1W4WET1 A0A0A9W6P0 A0A146KNR1 A0A0A9VR67 A0A0Q9WXE6 B4K4E9 A0A1Y1NJZ5

PDB

2XYC E-value=1.18461e-06, Score=127

KEGG

105842638 no KO assigned | (RefSeq) uncharacterized LOC105842638

GO

GO:0016021 GO:0005515 GO:0006662 GO:0015035 GO:0004674 GO:0005488 GO:0005507 GO:0004713 GO:0016491 GO:0015930

Length:

624

Number of predicted TMHs:

1

Exp number of AAs in TMHs:

22.63104

Exp number, first 60 AAs:

0.05553

Total prob of N-in:

0.09613

outside

1 - 310

TMhelix

311 - 333

inside

334 - 624

Pi

309.843777

Theta

188.776016

Tajima's D

1.653107

CLR

0.250423

CSRT

0.821658917054147

Interpretation

Uncertain

Sequence

Summary

Ontologies

Topology

Population Genetic Test Statistics