Gene
KWMTBOMO14354
Pre Gene Modal
BGIBMGA008204
Annotation
PREDICTED:_transcription_factor_SPT20_homolog_[Papilio_polytes]
Location in the cell
Nuclear Reliability : 2.56
Sequence
CDS
ATGTCAACTCCTCAGGAATTATTGGCTGTGATATTGGCGTTGGCCAGTGTGGTAGCAGAGGCTCCGGCGCCCTACGCTCCAAGCGGCTGGAAACCTGAAGGCCCAGCCTTCGTGTTGCCGCAACGAGGACAGTTGCAGCCACAGCAAACCCAAAACTATCTGCCACCTTTTGACCCAAGGAATCCAGCCATTCCGGTAATACCTAGCAACGAGTATGGAATACCCAATGACGTGTCAGTCCAAGGTCTACCTACTCAGGAGCAGCAGCCAATATTCCAGACTTCTCCAATAAATGGCCAAGAGAATCAAGGACCATATTTTACTTCTGACATTAAGAACTTGGACGAAAACCTCAAGCAGAATCAGTACCAGATCCAACAAGAGAACTACCGCACTTTCCAAAGGCAAAAGCAACTAGAGGCAGCTCAGGCTAAGAATCAAGCTAATAACCTTCCTGCACCACAAGCCCCAAGGCAATTCGCTTCAAGAACCACTGCGCGACCGACTTCGACCACGCCTGCTGAGAGGACCACAGAAGCTCCCGCCACTCAAGTCACCGAAGCCAATCTGAATGAACGAGAGATCTTAGAAGACGACAGCTCTCCAGCCAAGCTACAACAGAAGACATCTGTGGAAATCACGAGACAGAACATTCAGCAATACCCTGGGGAGTTGTACCTCGCTTCGTTGGCTCAGCTACGGCTGCAACCACAATTTGTTCCTTTACAACAAATTAGGGATAGCTACGTCCAGCCGCTGCAAGTTGAGCAGAAGCCAGCTGGGTTCGATGGACCTGCGCACTTCGCTGCCTTCCCTTCTGTACTCGCTCAGCAACAGGTTGAAGGTCAGCAAAATATAAACAGAAATCCGCCGCTTTTGATCGGAGAACAAGCCCCACCAAACTATCTGGTTCAACAGCCTGCAGCTCAGTTCCAACCTGCCTACCAACCTGATTACCAACAACCAATCGCTTTGCAGCCACAAGCACTCCAGCCAAACTATCTGGCTCCTAACAGCGAAGCTGTCGGTATTCAACAGCAAGTGCAGTATCAACCTGCCGCTACCTACCAACCTCAGCAGTTCCCTCAACTGCAGGCTCAACCGGTCCTTCTTCAACCGACGCAAATAAACCAGCCCACTCAATTCGCCGCGCAACCAGCCCAAGAATCAGAGAACAATAATCGGGAAGAGGTTGAAAATATCCAACCTCAAGTTTATCAACCTCAAACTCAACCGAACTACCAGCAACCTCAAGTATATCAGCCGCCTGTCTTCGTTCAGCAACCCGTCAACCAGTATCAGGCACCACTTTTCCCTGCCCAGCTGATCAGTCAAGATCAGCTCTATCAAGGGCAATTCCAGCCTCAATTTGTAGCTCAGCCTGCCCAACAAAACCAAGGAACCTTGCAAAGTGGGCTAGACGTAGATCAAGAAGGAAACGACCTTGAGCAGTCCGAGGAGGCCGAAGATGATGACGAGGGGTCGAAAGCGACTGCAGTGGCCACCGTATTTGGAGCAAGGACCCAGCCAAGAGTTATCACCCAATACGGAGCTCCATATCCAGTGCCGAGGCAGCAGGCGAGCCCTGGATACCAGACCACTACTGAATCAGCGGTCGAAGAAGTAACGGAGGAAGGTCCTGCCATCGCCCAGGCCGTGGCGGTCTCCAACGGGGGTAGGAGGAAAAATGCTAAACTCAGGACTCGTCGTCTTCGTCCCGTGTTTACATTGGACAGATCCGGACATTTGGTTTTAGCTCAAGAACAGTAA
Protein
MSTPQELLAVILALASVVAEAPAPYAPSGWKPEGPAFVLPQRGQLQPQQTQNYLPPFDPRNPAIPVIPSNEYGIPNDVSVQGLPTQEQQPIFQTSPINGQENQGPYFTSDIKNLDENLKQNQYQIQQENYRTFQRQKQLEAAQAKNQANNLPAPQAPRQFASRTTARPTSTTPAERTTEAPATQVTEANLNEREILEDDSSPAKLQQKTSVEITRQNIQQYPGELYLASLAQLRLQPQFVPLQQIRDSYVQPLQVEQKPAGFDGPAHFAAFPSVLAQQQVEGQQNINRNPPLLIGEQAPPNYLVQQPAAQFQPAYQPDYQQPIALQPQALQPNYLAPNSEAVGIQQQVQYQPAATYQPQQFPQLQAQPVLLQPTQINQPTQFAAQPAQESENNNREEVENIQPQVYQPQTQPNYQQPQVYQPPVFVQQPVNQYQAPLFPAQLISQDQLYQGQFQPQFVAQPAQQNQGTLQSGLDVDQEGNDLEQSEEAEDDDEGSKATAVATVFGARTQPRVITQYGAPYPVPRQQASPGYQTTTESAVEEVTEEGPAIAQAVAVSNGGRRKNAKLRTRRLRPVFTLDRSGHLVLAQEQ
Summary
Uniprot
Pubmed
EMBL
Proteomes
PRIDE
ProteinModelPortal
Ontologies
GO
Topology
SignalP
Position: 1 - 19,
Likelihood: 0.956326
Length:
589
Number of predicted TMHs:
0
Exp number of AAs in TMHs:
5.33856
Exp number, first 60 AAs:
5.33856
Total prob of N-in:
0.25100
outside
1 - 589
Population Genetic Test Statistics
Pi
200.141256
Theta
152.593161
Tajima's D
0.771294
CLR
0.066296
CSRT
0.597370131493425
Interpretation
Uncertain
