Silkworm Genome Informatics Database

Gene

KWMTBOMO14349

Pre Gene Modal

BGIBMGA008121

Annotation

PREDICTED:_uncharacterized_protein_LOC101746654_isoform_X1_[Bombyx_mori]

Location

Bomo_Chr24(-):2747909-2766809 View in EpiBrowser

Location in the cell

Nuclear Reliability : 3.607

CDS

ATGCCGTTGAAGAAGAGAAAATACAATGCTAGATTTCCACCAGGACGTATCAAGAAGATAATGCAGACGGATGAGGAGGTGGGGAAAGTAGCACAGGCAGTCCCCATCATAATTTCGCGCACCTTAGAGTTGTTCGTGCAATCATTGCTGACTAAAGCGATGCACGTGACCTTGAACAGAAACGCTAAGACCCTCAGTCCATCGCACGTGAAGCAATGCATCCTGGCTGAATCCAGATTTGACTTCCTGAAGGATCTGGTTAAAAATATACCAGATGTATCAGCGGCGGAAGAGAAAGAGATGATGAGTGCTGAAAGCTCGCCGAATTCTTCAAGATTTTCAGACGTCTCTGTACCGCCGCGGAGGATAGGCAGGGAGGACTCCAACAGCTCGAGCAGTTGCGACGTCAAAGTTCCAATAACCCCGACAAATCTCATCCGAGATCCGTTGAAGCGGGCCGTCTCCTCGGAAACCGAGATCCCGCCGAAGCCAGCGATCCCAACGATAACTTCCAACGATGTAGCGATAGATCTATCCAAGAAGTCGGCGGAAGAGAAACGTCCAGTGCGGACGGCGAACTTCTACCAGGAGACGCTCTCCGACGAGACGGAGCATCGGAGCGTCATCACCGTGAACCCGACGTACTCCAGTCCGCAGCCGTCGACGAGCTACACGAAATTAAAACCAATAGAACTCCCGCATAAGGTCGAAGTTGTCGTGCCAAAAAAGTTTACTGTGTTACCGTCTATGCCTAAGACACCGGTGACGCCGCGGACGCCCGTCACGCCGATACTAAACATAGATTTTACCAAAAACATAGCGAATCCGGAAATTAAAGTTCTAGATACGGCCGCGGCGAACATAATCGCGGTGCCGAAGAACGAAAGGAAATACTTGCACAGGCAGAATTCTAAACCTAGAGACGTCAAGAGATTCGAAACGCGATCGGTCCCCACGCAGGCGCATCCAGTCGATTTAGATCACTTGAATTCCGGGAATCTACAGATCGACGAAGACTACGATACCTGA

Protein

MPLKKRKYNARFPPGRIKKIMQTDEEVGKVAQAVPIIISRTLELFVQSLLTKAMHVTLNRNAKTLSPSHVKQCILAESRFDFLKDLVKNIPDVSAAEEKEMMSAESSPNSSRFSDVSVPPRRIGREDSNSSSSCDVKVPITPTNLIRDPLKRAVSSETEIPPKPAIPTITSNDVAIDLSKKSAEEKRPVRTANFYQETLSDETEHRSVITVNPTYSSPQPSTSYTKLKPIELPHKVEVVVPKKFTVLPSMPKTPVTPRTPVTPILNIDFTKNIANPEIKVLDTAAANIIAVPKNERKYLHRQNSKPRDVKRFETRSVPTQAHPVDLDHLNSGNLQIDEDYDT

Uniprot

H9JF24 A0A2A4JBD4 A0A1E1W6F3 A0A0N1IHA1 A0A212ELS4 A0A194Q712 + More
A0A2H1V8D3 A0A2W1BBY5

Pubmed

19121390 26354079 22118469 28756777

EMBL

BABH01027029 NWSH01002130 PCG69076.1 GDQN01008494 JAT82560.1 KQ460601 + More
KPJ13809.1 AGBW02013982 OWR42450.1 KQ459386 KPJ01169.1 ODYU01001194 SOQ37069.1 KZ150334 PZC71334.1

Proteomes

UP000005204 UP000218220 UP000053240 UP000007151 UP000053268

PRIDE

H9JF24

Pfam

PF00808 CBFD_NFYB_HMF

Interpro

IPR009072 Histone-fold + More
IPR003958 CBFA_NFYB_domain

SUPFAM

SSF47113 SSF47113

Gene 3D

1.10.20.10

ProteinModelPortal

H9JF24 A0A2A4JBD4 A0A1E1W6F3 A0A0N1IHA1 A0A212ELS4 A0A194Q712 + More
A0A2H1V8D3 A0A2W1BBY5

PDB

1JFI E-value=7.73062e-23, Score=264

KEGG

101746654 K21752 Dr1-associated corepressor | (RefSeq) uncharacterized LOC101746654

GO

GO:0046982 GO:0005634 GO:0005524 GO:0006468 GO:0004674 GO:0005488 GO:0005507 GO:0004713 GO:0016491 GO:0015930

Subcellular location

Nucleus

Length:

342

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

0.04462

Exp number, first 60 AAs:

0.04427

Total prob of N-in:

0.07128

outside

1 - 342

Pi

263.738992

Theta

169.507155

Tajima's D

1.753017

CLR

0.165538

CSRT

0.84190790460477

Interpretation

Uncertain

Sequence

Summary

Ontologies

Topology

Population Genetic Test Statistics