Gene

KWMTBOMO14346  Validated by peptides from experiments

Pre Gene Modal

BGIBMGA008199

Annotation

PREDICTED:_thioredoxin-related_transmembrane_protein_1-like_[Bombyx_mori]

Location

Bomo_Chr24(+):2642600-2652210      View in EpiBrowser

Location in the cell

Nuclear   Reliability : 1.159 PlasmaMembrane   Reliability : 1.374

CDS

ATGGCGCGCGTTTACGACGCTTCTCGTAGAATTTTGATTTTTTCTTTTTCTTTCATAGTATTATTATGTTCGACAATAGATTTTGCTAGTGCAAACAAAGAACTAAATGAAAACAACTGGAAAGAAATCCTCGAAGGAGAATGGATGCTCGAATTCTACGCCCCATGGTGTCCTGCCTGCAATGCTCTAGCGCCAGCTTGGAAGGAGCTCTCTACACGAGCTGCCAAAAACTCTCTCCCTCTACGTACTGCTGCAGTTGACGTCACTAACTCGCCTGGTCTAAGTGGAAGATTTGTTGTTACCGCACTGCCTACTATTTTCCATGTGAAAGATGGCGAGTTTCGTCAGTACAAGGGTCCACGTGATGTAGAGTCCATGCTGACCTTTGTCGAGAACAAAAAGTGGAAGCAAACCGATCCCATCCCGGGATGGAAGGCACCTGACTCACTGCAAATGTCCTTGGTTGCTGAGTTCTTCAAGATGAGTCAAGCACTTCGGGGAGTCCACAATATGCTTATGGAAGCATACGGCTTACCATCATGGGGTTCATACCTTATATTCGCCATTGCCACAATATTCGTTGGTGCTCTAGTCGGATTGATTTTAGTCTGCGTGATTGACTTCCTCCATCCACCTCAGAAAGTCGACAAGAAGTTTATATCGAGATCTGAACTTGAGAAGCTAGCACGTGGCGACAATGATGGCAAGAAATCTGACGATGAGCAGGAGCTGATCAATGATGACATTCTGGATGACGCTGAAAACTCTCCCAACAGTGACGCTGAGAAGAACTCTCCCAGCGATACTTCTGAAGATGATAACGAGAAAACATCCGAAGCGGCCGGAGACAGTAAGCCAGTGGACAAGGACTCCAGCGACAAACCAGAGGCTCGGAAACGCAGACCAAGGAAGGCTGACTGA

Protein

MARVYDASRRILIFSFSFIVLLCSTIDFASANKELNENNWKEILEGEWMLEFYAPWCPACNALAPAWKELSTRAAKNSLPLRTAAVDVTNSPGLSGRFVVTALPTIFHVKDGEFRQYKGPRDVESMLTFVENKKWKQTDPIPGWKAPDSLQMSLVAEFFKMSQALRGVHNMLMEAYGLPSWGSYLIFAIATIFVGALVGLILVCVIDFLHPPQKVDKKFISRSELEKLARGDNDGKKSDDEQELINDDILDDAENSPNSDAEKNSPSDTSEDDNEKTSEAAGDSKPVDKDSSDKPEARKRRPRKAD

Uniprot

H9JFA2   A0A2W1BJS9   A0A2H1WN25   A0A2A4J3D7   S4PYA6   A0A194Q6L1   + More
A0A212ELU6   A0A0N1IP52   A0A1W4WKN3   A0A2A3E801   A0A088ABX7   A0A154PGI1   A0A232F4D2   A0A023F3C8   A0A224XUZ9   A0A0L7RBK5   K7ISB6   A0A0M8ZTF8   A0A2J7PH31   A0A1B0EV66   A0A0A9W0N3   A0A1Y1L354   A0A067R5A5   A0A1L8DTV5   A0A1L8DU67   A0A1B6EEK0   U4UCB9   D6WIH6   A0A1Y1L229   A0A2S2Q597   A0A1Y1KX76   G3MM19   N6U622   V9IF90   A0A1B6K301   B7Q0F5   C4WYF3   A0A2S2PTW7   A0A131Z922   A0A2H8TFZ0   A0A023GPC2   A0A1Z5KVM2   A0A1E1XA41   A0A182YAK4   A0A1Z5LCQ1   A0A224Z0S2   A0A1E1XV89   A0A023FLX6   L7M1M6   E2BU49   A0A023FVV1   A0A1B6JWN0   A0A0P5L2L4   A0A087T445   A0A182IM28   A0A162QFG1   A0A0N8BHZ9   A0A0N8BJE8   A0A224Z0W0   A0A0P5UBX5   A0A0P6ESD8   A0A1I8PM99   A0A0P5L3T3   A0A0P6FZM3   L7LSJ1   A0A0P5CNG9   A0A0P5ZKQ5   A0A0P5TUX4   A0A0P5BJE6   A0A0N8CYH3   V5IEW5   A0A0P5EIH3   A0A1A9ZI44   A0A0P5BNF3   A0A0P6HA45   A0A1A9UGZ3   A0A1B0G7S8   A0A0P5XCE7   A0A1B0GMP5   A0A090XAW4   A0A151K2H0   A0A023ERY3   A0A182QEG3   B4KUD5   B4QB04   B4I8U2   Q9W1I7   B3NPT3   A0A2M3Z1A6   A0A1W4V0Y2   A0A1J1IE91   B4PA77  

Pubmed

19121390    28756777    23622113    26354079    22118469    28648823    + More
25474469    20075255    25401762    26823975    28004739    24845553    23537049    18362917    19820115    22216098    26830274    28528879    28503490    25244985    28797301    29209593    25576852    20798317    25765539    25970599    24945155    17994087    22936249    10731132    12537568    12537572    12537573    12537574    16110336    17569856    17569867    26109357    26109356    17550304   

EMBL

BABH01027013    BABH01027014    BABH01027015    KZ150079    PZC73904.1    ODYU01009431    + More
SOQ53854.1    NWSH01003347    PCG66501.1    GAIX01003623    JAA88937.1    KQ459386    KPJ01173.1    AGBW02013982    OWR42448.1    KQ460601    KPJ13806.1    KZ288338    PBC27828.1    KQ434899    KZC10922.1    NNAY01000967    OXU25686.1    GBBI01002929    JAC15783.1    GFTR01004196    JAW12230.1    KQ414617    KOC68312.1    KQ435851    KOX70775.1    NEVH01025150    PNF15645.1    AJWK01015551    GBHO01043611    GBRD01004640    GDHC01017819    JAF99992.1    JAG61181.1    JAQ00810.1    GEZM01071151    JAV66006.1    KK852954    KDR13281.1    GFDF01004280    JAV09804.1    GFDF01004279    JAV09805.1    GEDC01000936    JAS36362.1    KB632256    ERL90702.1    KQ971334    EEZ99667.1    GEZM01071152    JAV66005.1    GGMS01003567    MBY72770.1    GEZM01071150    GEZM01071149    JAV66009.1    JO842920    AEO34537.1    APGK01041389    KB740993    ENN76081.1    JR043509    AEY59783.1    GECU01001875    JAT05832.1    ABJB010861124    DS831942    EEC12327.1    ABLF02032903    AK343160    BAH72923.1    GGMR01020155    MBY32774.1    GEDV01001089    JAP87468.1    GFXV01000837    MBW12642.1    GBBM01000268    JAC35150.1    GFJQ02007818    JAV99151.1    GFAC01003091    JAT96097.1    GFJQ02001813    JAW05157.1    GFPF01012320    MAA23466.1    GFAA01000408    JAU03027.1    GBBK01001860    JAC22622.1    GACK01007074    JAA57960.1    GL450581    EFN80766.1    GBBL01001673    JAC25647.1    GECU01004393    JAT03314.1    GDIQ01175866    JAK75859.1    KK113329    KFM59884.1    LRGB01000337    KZS19647.1    GDIQ01175867    JAK75858.1    GDIQ01171875    JAK79850.1    GFPF01012321    MAA23467.1    GDIP01115260    JAL88454.1    GDIQ01059073    JAN35664.1    GDIQ01175868    JAK75857.1    GDIQ01041985    JAN52752.1    GACK01010487    JAA54547.1    GDIP01183694    JAJ39708.1    GDIP01043621    JAM60094.1    GDIP01121310    JAL82404.1    GDIP01183695    JAJ39707.1    GDIP01086463    JAM17252.1    GANP01009477    JAB74991.1    GDIP01146006    JAJ77396.1    GDIP01182197    JAJ41205.1    GDIQ01022479    JAN72258.1    CCAG010016894    GDIP01086464    JAM17251.1    AJVK01012214    GBIH01002520    JAC92190.1    LKEX01012869    KYN50191.1    GAPW01001616    JAC11982.1    AXCN02000266    CH933808    EDW10722.1    CM000362    CM002911    EDX08441.1    KMY96128.1    CH480824    EDW57017.1    AE013599    AY118750    AAF47072.1    AAM50610.1    CH954179    EDV56874.1    GGFM01001559    MBW22310.1    CVRI01000047    CRK97318.1    CM000158    EDW92403.1   

Proteomes

UP000005204    UP000218220    UP000053268    UP000007151    UP000053240    UP000192223    + More
UP000242457    UP000005203    UP000076502    UP000215335    UP000053825    UP000002358    UP000053105    UP000235965    UP000092461    UP000027135    UP000030742    UP000007266    UP000019118    UP000001555    UP000007819    UP000076408    UP000008237    UP000054359    UP000075880    UP000076858    UP000095300    UP000092445    UP000078200    UP000092444    UP000092462    UP000078542    UP000075886    UP000009192    UP000000304    UP000001292    UP000000803    UP000008711    UP000192221    UP000183832    UP000002282   

PRIDE

H9JFA2    G3MM19    B7Q0F5    V5IEW5    Q9W1I7   

Pfam

PF00085   Thioredoxin

Interpro

IPR017937   Thioredoxin_CS        + More
IPR013766   Thioredoxin_domain       
IPR036249   Thioredoxin-like_sf       

SUPFAM

SSF52833   SSF52833       

ProteinModelPortal

H9JFA2   A0A2W1BJS9   A0A2H1WN25   A0A2A4J3D7   S4PYA6   A0A194Q6L1   + More
A0A212ELU6   A0A0N1IP52   A0A1W4WKN3   A0A2A3E801   A0A088ABX7   A0A154PGI1   A0A232F4D2   A0A023F3C8   A0A224XUZ9   A0A0L7RBK5   K7ISB6   A0A0M8ZTF8   A0A2J7PH31   A0A1B0EV66   A0A0A9W0N3   A0A1Y1L354   A0A067R5A5   A0A1L8DTV5   A0A1L8DU67   A0A1B6EEK0   U4UCB9   D6WIH6   A0A1Y1L229   A0A2S2Q597   A0A1Y1KX76   G3MM19   N6U622   V9IF90   A0A1B6K301   B7Q0F5   C4WYF3   A0A2S2PTW7   A0A131Z922   A0A2H8TFZ0   A0A023GPC2   A0A1Z5KVM2   A0A1E1XA41   A0A182YAK4   A0A1Z5LCQ1   A0A224Z0S2   A0A1E1XV89   A0A023FLX6   L7M1M6   E2BU49   A0A023FVV1   A0A1B6JWN0   A0A0P5L2L4   A0A087T445   A0A182IM28   A0A162QFG1   A0A0N8BHZ9   A0A0N8BJE8   A0A224Z0W0   A0A0P5UBX5   A0A0P6ESD8   A0A1I8PM99   A0A0P5L3T3   A0A0P6FZM3   L7LSJ1   A0A0P5CNG9   A0A0P5ZKQ5   A0A0P5TUX4   A0A0P5BJE6   A0A0N8CYH3   V5IEW5   A0A0P5EIH3   A0A1A9ZI44   A0A0P5BNF3   A0A0P6HA45   A0A1A9UGZ3   A0A1B0G7S8   A0A0P5XCE7   A0A1B0GMP5   A0A090XAW4   A0A151K2H0   A0A023ERY3   A0A182QEG3   B4KUD5   B4QB04   B4I8U2   Q9W1I7   B3NPT3   A0A2M3Z1A6   A0A1W4V0Y2   A0A1J1IE91   B4PA77  

PDB

1X5E     E-value=2.19337e-32,     Score=346

KEGG

101746374    no KO assigned | (RefSeq) thioredoxin-related transmembrane protein 1-like

GO

GO:0005623   GO:0016021   GO:0045454   GO:0016853   GO:0003756   GO:0012505   GO:0006355   GO:0043565   GO:0006508   GO:0005488   GO:0005507   GO:0004713   GO:0016491   GO:0015930  

SignalP

Position:   1 - 31,         Likelihood:  0.896304

 

 

Length:

306

Number of predicted TMHs:

2

Exp number of AAs in TMHs:

42.98469

Exp number, first 60 AAs:

19.4995

Total prob of N-in:

0.97884

POSSIBLE N-term signal

sequence

inside

1  -  11

TMhelix

12  -  31

outside

32  -  183

TMhelix

184  -  206

inside

207  -  306

 

 

Pi

271.584835

Theta

175.193193

Tajima's D

1.571111

CLR

11.231365

CSRT

0.805509724513774

Interpretation

Uncertain