Silkworm Genome Informatics Database

Gene

KWMTBOMO14344

Pre Gene Modal

BGIBMGA008125

Annotation

PREDICTED:_myb/SANT-like_DNA-binding_domain-containing_protein_3_[Bombyx_mori]

Location

Bomo_Chr24(-):2573794-2575619 View in EpiBrowser

Location in the cell

Nuclear Reliability : 3.385

CDS

ATGGATTCTGAAGTGGTAAGAGGCAAACCTCTGTCTAAAGATGAAACGAAAGCATTAATAGAATTGATAGAGAATAGCAGAATAATAACCACCAAGACGACCAACGCCACCAACAACAGCTTAAAAAAAAAAGAGTGGCATTGTATAGCGGAGCGATTTAACGCAAACACTGCTACTTGTCGTCGTACACCGCAACAACTAAGGTTGAAGTGGGAAAATTTAAAGAAAAACTGTCGCAAATACAATACCAAGATAAGGATGAATCGCATTAAGACTGGTGGTGGCGTTGCTGAATATATACCTCCAGACGAAATATTGGACAGAGTGGGTTCATTATTAGGAAGCACAGTCAGTGGATTCGTAGTGCCATTTGGGGGTGATAGGGAACCAGAAATGTTAATTGCTGGTTGTAGTGACTGTGCTAATGTTGACTCCTCTTGTGAAGATGCCAGGGTTTTAAATGTGGAAATTAAAAATAACTCAACCCCACCAGTGTCTTTGGCCAAATCTGTTGTGTTGGACTGTGAGTTGAATGACAATAGTGAGGTTGTGTTGGCTCCAGACGAACCTCACCATGTCTCATTTACTACACCTAGAAGAGAGAAAAAAAAAAGGAATCGAGATGAAGGAAGATCTGCAAGGAATGTTGCAATAGCTGAGTATTACTCAGAAAAGAAAAAAAATTTGAAAAGCAACTTGCTACAAAACAAGTTAAAAAACAAGAACATTAAATTAGAAAATAAAAAATTAAACTTAGAGATAGAAAAATTAAAATTAGAAAATCATAAATTAAAATTAGAAAATCAAAAATTAAACATAGAGTTAGAAGAAAATTAA

Protein

MDSEVVRGKPLSKDETKALIELIENSRIITTKTTNATNNSLKKKEWHCIAERFNANTATCRRTPQQLRLKWENLKKNCRKYNTKIRMNRIKTGGGVAEYIPPDEILDRVGSLLGSTVSGFVVPFGGDREPEMLIAGCSDCANVDSSCEDARVLNVEIKNNSTPPVSLAKSVVLDCELNDNSEVVLAPDEPHHVSFTTPRREKKKRNRDEGRSARNVAIAEYYSEKKKNLKSNLLQNKLKNKNIKLENKKLNLEIEKLKLENHKLKLENQKLNIELEEN

Uniprot

S4PY81 A0A2A4IVT0 A0A2H1VW07 A0A3S2M0J7

Pubmed

23622113

EMBL

GAIX01003748 JAA88812.1 NWSH01005652 PCG64077.1 ODYU01004776 SOQ45015.1 + More
RSAL01000086 RVE48309.1

Proteomes

UP000218220 UP000283053

Pfam

PF13873 Myb_DNA-bind_5

Interpro

IPR028002   Myb_DNA-bind_5        + More
IPR026753   NAIF1
IPR017877   Myb-like_dom

ProteinModelPortal

S4PY81 A0A2A4IVT0 A0A2H1VW07 A0A3S2M0J7

KEGG

101736867 no KO assigned | (RefSeq) myb/SANT-like DNA-binding domain-containing protein 3

GO

GO:0005634 GO:0006915 GO:0003677 GO:0015074 GO:0004190 GO:0006508 GO:0005488 GO:0005507 GO:0004713 GO:0016491 GO:0015930

PANTHER

PTHR23098

Length:

278

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

0.01209

Exp number, first 60 AAs:

0

Total prob of N-in:

0.03526

outside

1 - 278

Pi

243.657735

Theta

186.027589

Tajima's D

0.946712

CLR

0.274166

CSRT

0.646517674116294

Interpretation

Uncertain

Sequence

Summary

Ontologies

Topology

Population Genetic Test Statistics

Multiple alignment of Orthologues

Gene Tree