Silkworm Genome Informatics Database

Gene

KWMTBOMO14329 Validated by peptides from experiments

Pre Gene Modal

BGIBMGA008192

Annotation

putative_histidine_triad_protein_member_[Operophtera_brumata]

Location

Bomo_Chr24(+):2175065-2183557 View in EpiBrowser

Location in the cell

Nuclear Reliability : 2.683

CDS

ATGTCCGACGGCTGCCTAAAAGACGATGTCAGCGAGCAGCGTTGTAAAAGGTTGAAAATTGACAATGAAAACGGCAACAATCTAAATGACAATCAGTTAGAATTGAAAGACTTTGTTTTGGAGAAAATATTGAACAATAACACTAACAGGAAAACAGCTTGTGTGGTTGGAAAATTCAAAGACAAAAGTGGCGTGGCGCTAATCCTATTCGAAAAAAATGCTTTCAAGGAAAATGACCTAAGTGAAGAGGGTTATTTCTCCAAAGAAACTCAGCTGAAAACGTTTTTCGAGAACGATATTTACGGAAACTTCGAGTGTTTCCCGCCTTCGACTATAAACGGTGTGAAAACTACAATAATCTACCCAGCCACTGATAAGCATATTGCCAAATTTAGCCAGCAAGAAGTTCATATTGTGCTGGAAACTCCAGAGCTATATAAAAAACTGACATTGCCTCATCTCGAGAAAGAACAGTTCAATTTACAGTGGGTGTACAACATTCTAGAAGGTAAAAGTGAGCAAGATAGAATTGTACATGACAATAAAAGTGAAAAGGAAGGATTTGTGCTCCTCCCCGATCTGAAGTGGGACGGTCTTACCAAAGAGACATTGTATTTATTGGCTATTGTCAGACAAAGAGACATAAAAAGCCTTAGAGATTTGGACGAGCAGCATTTACCATTGTTAAAGAGGATTAGAGACGAGGGAAAGAAAACCATTTTAGAAAAATATCAGGTGCCTGGAAGTCAATTGCGTATATATCTGCATTACCAGCCTTCTTTCTACCATCTGCATATCCATTTCACTTATCTACGCCACGAGGCCCCTGGAATCTATGCAGAGAAATCACATCTACTCGACACCGTCATTGACAACATTACAATGATGCCCGACTATTATAAGAAAGCCACATTACCATTCACCATAAGAGAAATGGATAATTCATATGATGAAACAGACGAAGAGCTCGATGTGTCCACTTATATACCGATATCAGAATTTTGTCATATAATTCCCAATTCAATGTCATGTTTGAGAATAGACAAAAATACAGTTTCGTTCAGAATTCTAACCGAACCAAAGAATGGTGGAAATTTTTATACAGAATTACTTACCACTGGAAAACCTGAAAATTCTGTGAAGAAACAGAATCTAAAAATCAATATAAAAATCAGTGAAGAATTGAAAATTGTTTGCTCAAACTGTTCAAATGTTTTATCTGATGGTTGTGTCAAATTTGACAGGATTTTAGAATTGCCTTCAGCTAATTTGGACATGACAGAATGGTTCTGTCATGGACACGACCATGGAAATGTGGCAGATGTAGTTATAAAACAAAATAAATTAGATTTCCTATATCGATTAACATATTTCGTTATTGATCAATCAATCTTATCAGAGAAATCGAACAAATTTAATTCTAAAAGGGAGGTATACCATTGCAGCCGCTGTTTGGCTTGGCTCGGTCTCAAAATCAAAGACACTGTCAGACTTTACAATTCTGAAGTTAAAGTACACAACAATGAAAAAGAAGTACATATATTTTCTTACGAAAACCAACCTGAAAACATACATGTAAATGATTTTATACAAACAATAGAAAGTATAACTGAAGATTTTAAAATTGGCTTCCAATATGCAGTGATGTGTAAAATTGTATTAGAATGCACAATATCAGCGGCTAAAAAGCAATATCTCTTAATCTGGATAATGGATAAAGAATTACAAGTATTGAAGAACAAAGAAAACGTTACTAACAATAAAATTGAATTGAAATCTAGTTTTGTTACGAAAATACTTTACAAAATTGAGTTGGCGTTGAATGATGAAGTGGAAAATTGGTTAACGGACCCAGTTGTGGTTAATACGGAGATCTCTAAGAACATGTTCAGTGAAGGCATCGAACATTTGCAAAAAATGGCATCGAAAGTTCCAGAATCGTTCCGTTACTCCAACGGTTTTCATGTCAGTTACTTAAAAATTTAA

Protein

MSDGCLKDDVSEQRCKRLKIDNENGNNLNDNQLELKDFVLEKILNNNTNRKTACVVGKFKDKSGVALILFEKNAFKENDLSEEGYFSKETQLKTFFENDIYGNFECFPPSTINGVKTTIIYPATDKHIAKFSQQEVHIVLETPELYKKLTLPHLEKEQFNLQWVYNILEGKSEQDRIVHDNKSEKEGFVLLPDLKWDGLTKETLYLLAIVRQRDIKSLRDLDEQHLPLLKRIRDEGKKTILEKYQVPGSQLRIYLHYQPSFYHLHIHFTYLRHEAPGIYAEKSHLLDTVIDNITMMPDYYKKATLPFTIREMDNSYDETDEELDVSTYIPISEFCHIIPNSMSCLRIDKNTVSFRILTEPKNGGNFYTELLTTGKPENSVKKQNLKINIKISEELKIVCSNCSNVLSDGCVKFDRILELPSANLDMTEWFCHGHDHGNVADVVIKQNKLDFLYRLTYFVIDQSILSEKSNKFNSKREVYHCSRCLAWLGLKIKDTVRLYNSEVKVHNNEKEVHIFSYENQPENIHVNDFIQTIESITEDFKIGFQYAVMCKIVLECTISAAKKQYLLIWIMDKELQVLKNKENVTNNKIELKSSFVTKILYKIELALNDEVENWLTDPVVVNTEISKNMFSEGIEHLQKMASKVPESFRYSNGFHVSYLKI

Uniprot

A0A1B0DAR6

EMBL

AJVK01013382

Proteomes

UP000092462

Pfam

PF05652 DcpS + More
PF09814 HECT_2

Interpro

IPR011145   Scavenger_mRNA_decap_enz_N        + More
IPR019193   UBQ-conj_enz_E2-bd_prot
IPR008594   DcpS/DCS2
IPR036265   HIT-like_sf

SUPFAM

SSF102860 SSF102860 + More
SSF54197 SSF54197

Gene 3D

3.30.200.40 3.30.428.10

ProteinModelPortal

A0A1B0DAR6

PDB

1XMM E-value=1.58735e-70, Score=678

KEGG

101739862 K12584 m7GpppX diphosphatase [EC:3.6.1.59] | (RefSeq) m7GpppX diphosphatase

PATHWAY

03018 RNA degradation - Bombyx mori (domestic silkworm)

GO

GO:0000290 GO:0016787 GO:0003824 GO:0008270 GO:0005488 GO:0005507 GO:0004713 GO:0016491 GO:0015930

PANTHER

PTHR12978

Length:

661

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

0.00951

Exp number, first 60 AAs:

0

Total prob of N-in:

0.00037

outside

1 - 661

Pi

322.763547

Theta

183.644079

Tajima's D

2.67439

CLR

0.350611

CSRT

0.95925203739813

Interpretation

Uncertain

Sequence

Summary

Ontologies

Topology

Population Genetic Test Statistics